Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL031737.1-201ENST00000450125 223 ntBASIC-1.39□□□□□ -2.63
SRP54P61011 RNU6-267P-201ENST00000516714 103 ntBASIC-1.39□□□□□ -2.63
SRP54P61011 RNU6-557P-201ENST00000516842 110 ntBASIC-1.39□□□□□ -2.63
SRP54P61011 AP001318.4-201ENST00000616637 121 ntBASIC-1.39□□□□□ -2.63
SRP54P61011 SNORD116-22-201ENST00000384430 92 ntBASIC-1.4□□□□□ -2.63
SRP54P61011 MIR3675-201ENST00000583661 73 ntBASIC-1.4□□□□□ -2.63
SRP54P61011 MALAT1.1-201ENST00000618249 95 ntBASIC-1.4□□□□□ -2.63
SRP54P61011 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 RNU6-402P-201ENST00000410678 103 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 RNU4-61P-201ENST00000411243 107 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 RNU7-174P-201ENST00000516248 59 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 RNU6-303P-201ENST00000517091 106 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 AC091912.2-201ENST00000624798 167 ntBASIC-1.41□□□□□ -2.64
SRP54P61011 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 RNY4P18-201ENST00000391107 89 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 AC074348.1-201ENST00000426503 132 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 MIR548BB-201ENST00000626714 66 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 MIR5683-201ENST00000636514 76 ntBASIC-1.42□□□□□ -2.64
SRP54P61011 RNU6-478P-201ENST00000363904 110 ntBASIC-1.43□□□□□ -2.64
SRP54P61011 SNORA8.1-201ENST00000384250 140 ntBASIC-1.43□□□□□ -2.64
SRP54P61011 RNU6-576P-201ENST00000390854 102 ntBASIC-1.43□□□□□ -2.64
SRP54P61011 MIR6874-201ENST00000635894 71 ntBASIC-1.43□□□□□ -2.64
SRP54P61011 MIR548C-201ENST00000384815 97 ntBASIC-1.44□□□□□ -2.64
SRP54P61011 RNU6-604P-201ENST00000390917 100 ntBASIC-1.44□□□□□ -2.64
SRP54P61011 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.44□□□□□ -2.64
SRP54P61011 RNU6-982P-201ENST00000516216 102 ntBASIC-1.44□□□□□ -2.64
SRP54P61011 AC138207.3-201ENST00000585289 166 ntBASIC-1.44□□□□□ -2.64
SRP54P61011 RNU6-686P-201ENST00000364839 107 ntBASIC-1.45□□□□□ -2.64
SRP54P61011 SNORA40.13-201ENST00000516379 120 ntBASIC-1.45□□□□□ -2.64
SRP54P61011 RNA5SP461-201ENST00000516451 104 ntBASIC-1.45□□□□□ -2.64
SRP54P61011 MIR6502-201ENST00000617296 76 ntBASIC-1.45□□□□□ -2.64
SRP54P61011 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.46□□□□□ -2.64
SRP54P61011 RNU6-458P-201ENST00000384179 107 ntBASIC-1.46□□□□□ -2.64
SRP54P61011 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.46□□□□□ -2.64
SRP54P61011 U6.58-201ENST00000613107 107 ntBASIC-1.46□□□□□ -2.64
SRP54P61011 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 RNU6-164P-201ENST00000364604 103 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 MIR488-201ENST00000365739 83 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 RNU6-587P-201ENST00000391282 106 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 MIR548M-201ENST00000408260 86 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 RNU6-313P-201ENST00000516317 112 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 MIR4490-201ENST00000582647 84 ntBASIC-1.47□□□□□ -2.64
SRP54P61011 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.48□□□□□ -2.65
SRP54P61011 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.48□□□□□ -2.65
SRP54P61011 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.48□□□□□ -2.65
SRP54P61011 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 SNORD45.1-201ENST00000363181 77 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 RNU6-755P-201ENST00000364400 103 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 RPL35AP4-201ENST00000412007 102 ntBASIC-1.49□□□□□ -2.65
SRP54P61011 RNU6-640P-201ENST00000363693 105 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 RNU6-675P-201ENST00000384236 104 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 MIR601-201ENST00000385256 79 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 RNU6-129P-201ENST00000391022 107 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 AC090616.4-201ENST00000448026 115 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 RNA5SP180-201ENST00000516181 101 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 MIR4520-1-201ENST00000582609 70 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 U4.4-201ENST00000620626 117 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.5□□□□□ -2.65
SRP54P61011 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.51□□□□□ -2.65
SRP54P61011 MIR5591-201ENST00000578248 65 ntBASIC-1.51□□□□□ -2.65
SRP54P61011 MIR198-201ENST00000637333 62 ntBASIC-1.51□□□□□ -2.65
SRP54P61011 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.52□□□□□ -2.65
SRP54P61011 RNU6-696P-201ENST00000390834 107 ntBASIC-1.52□□□□□ -2.65
SRP54P61011 MIR548Q-201ENST00000408404 100 ntBASIC-1.52□□□□□ -2.65
SRP54P61011 HLA-S-202ENST00000425174 53 ntBASIC-1.52□□□□□ -2.65
SRP54P61011 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.52□□□□□ -2.65
SRP54P61011 RNU6-698P-201ENST00000363523 107 ntBASIC-1.53□□□□□ -2.65
SRP54P61011 RNU6-34P-201ENST00000364874 107 ntBASIC-1.53□□□□□ -2.65
SRP54P61011 MIR3910-1-201ENST00000580936 111 ntBASIC-1.53□□□□□ -2.65
SRP54P61011 MIR4484-201ENST00000582855 83 ntBASIC-1.53□□□□□ -2.65
SRP54P61011 AC006160.2-201ENST00000637708 154 ntBASIC-1.53□□□□□ -2.65
SRP54P61011 SNORD113-1-201ENST00000365321 69 ntBASIC-1.55□□□□□ -2.66
SRP54P61011 RNU6-598P-201ENST00000364017 105 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 MIR1468-201ENST00000410600 86 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 RNU6-168P-201ENST00000516189 101 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 RNU6-844P-201ENST00000517175 102 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 MIR548V-201ENST00000584165 80 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 MIR1297-201ENST00000637311 77 ntBASIC-1.56□□□□□ -2.66
SRP54P61011 RNU6-32P-201ENST00000383948 107 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 RNU6-13P-201ENST00000384248 107 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 RNU6-12P-201ENST00000384604 107 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 RNU6-41P-201ENST00000384741 107 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 MIR1285-2-201ENST00000408311 88 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 MIR4770-201ENST00000579149 58 ntBASIC-1.57□□□□□ -2.66
SRP54P61011 RNU6-226P-201ENST00000363778 107 ntBASIC-1.58□□□□□ -2.66
SRP54P61011 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.58□□□□□ -2.66
SRP54P61011 RNU6-147P-201ENST00000383983 107 ntBASIC-1.58□□□□□ -2.66
SRP54P61011 SNORA63.4-201ENST00000362763 126 ntBASIC-1.59□□□□□ -2.66
SRP54P61011 MIR520D-201ENST00000385002 87 ntBASIC-1.59□□□□□ -2.66
SRP54P61011 RNU6-630P-201ENST00000391258 106 ntBASIC-1.59□□□□□ -2.66
SRP54P61011 MIR429-201ENST00000362106 83 ntBASIC-1.6□□□□□ -2.67
SRP54P61011 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.6□□□□□ -2.67
SRP54P61011 RNU6-608P-201ENST00000383927 104 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms