Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
EMP3P54852 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
EMP3P54852 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNA5SP247-201ENST00000411181 105 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNU6-68P-201ENST00000516576 104 ntBASIC1.33□□□□□ -2.2
EMP3P54852 MIR499B-201ENST00000636498 73 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNU6-836P-201ENST00000362920 107 ntBASIC1.32□□□□□ -2.2
EMP3P54852 RNU6-900P-201ENST00000384498 102 ntBASIC1.32□□□□□ -2.2
EMP3P54852 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
EMP3P54852 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.32□□□□□ -2.2
EMP3P54852 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
EMP3P54852 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
EMP3P54852 MIR581-201ENST00000384895 96 ntBASIC1.3□□□□□ -2.2
EMP3P54852 MIR5683-201ENST00000636514 76 ntBASIC1.3□□□□□ -2.2
EMP3P54852 SNORD71-201ENST00000411292 86 ntBASIC1.29□□□□□ -2.2
EMP3P54852 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.29□□□□□ -2.2
EMP3P54852 MIR6854-201ENST00000614935 69 ntBASIC1.29□□□□□ -2.2
EMP3P54852 RNA5SP224-201ENST00000365069 126 ntBASIC1.27□□□□□ -2.21
EMP3P54852 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
EMP3P54852 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
EMP3P54852 Y_RNA.129-201ENST00000363392 110 ntBASIC1.26□□□□□ -2.21
EMP3P54852 AC108740.1-201ENST00000498629 225 ntBASIC1.26□□□□□ -2.21
EMP3P54852 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
EMP3P54852 Y_RNA.260-201ENST00000364628 101 ntBASIC1.25□□□□□ -2.21
EMP3P54852 Y_RNA.406-201ENST00000383984 100 ntBASIC1.25□□□□□ -2.21
EMP3P54852 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
EMP3P54852 RNU7-129P-201ENST00000516128 62 ntBASIC1.25□□□□□ -2.21
EMP3P54852 RNU6-321P-201ENST00000410912 106 ntBASIC1.24□□□□□ -2.21
EMP3P54852 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
EMP3P54852 AC114755.3-201ENST00000481111 251 ntBASIC1.24□□□□□ -2.21
EMP3P54852 AC013734.1-201ENST00000619329 111 ntBASIC1.24□□□□□ -2.21
EMP3P54852 Y_RNA.223-201ENST00000364290 113 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNU6-455P-201ENST00000384681 107 ntBASIC1.23□□□□□ -2.21
EMP3P54852 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNA5SP325-201ENST00000363756 130 ntBASIC1.22□□□□□ -2.21
EMP3P54852 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
EMP3P54852 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
EMP3P54852 RNU6-392P-201ENST00000364926 101 ntBASIC1.21□□□□□ -2.22
EMP3P54852 AL353691.2-201ENST00000443795 59 ntBASIC1.2□□□□□ -2.22
EMP3P54852 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
EMP3P54852 SNORD56B-201ENST00000384713 71 ntBASIC1.19□□□□□ -2.22
EMP3P54852 SNORA26.4-201ENST00000391188 123 ntBASIC1.19□□□□□ -2.22
EMP3P54852 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
EMP3P54852 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
EMP3P54852 uc_338.17-201ENST00000619633 179 ntBASIC1.18□□□□□ -2.22
EMP3P54852 RPL35AP4-201ENST00000412007 102 ntBASIC1.17□□□□□ -2.22
EMP3P54852 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
EMP3P54852 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
EMP3P54852 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
EMP3P54852 MIR1197-201ENST00000408818 88 ntBASIC1.14□□□□□ -2.23
EMP3P54852 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
EMP3P54852 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
EMP3P54852 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
EMP3P54852 MIR548AJ2-201ENST00000408539 92 ntBASIC1.12□□□□□ -2.23
EMP3P54852 MIR6514-201ENST00000622549 70 ntBASIC1.12□□□□□ -2.23
EMP3P54852 SNORD115-33-201ENST00000363723 82 ntBASIC1.11□□□□□ -2.23
EMP3P54852 Y_RNA.226-201ENST00000364337 114 ntBASIC1.11□□□□□ -2.23
EMP3P54852 SNORD45C-201ENST00000383893 79 ntBASIC1.11□□□□□ -2.23
EMP3P54852 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.11□□□□□ -2.23
EMP3P54852 FTX_4.1-201ENST00000616291 147 ntBASIC1.11□□□□□ -2.23
EMP3P54852 U6.97-201ENST00000636904 101 ntBASIC1.11□□□□□ -2.23
EMP3P54852 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
EMP3P54852 RNU6-1169P-201ENST00000363537 103 ntBASIC1.1□□□□□ -2.23
EMP3P54852 RNU6-901P-201ENST00000384593 106 ntBASIC1.1□□□□□ -2.23
EMP3P54852 MIR379-201ENST00000362218 67 ntBASIC1.09□□□□□ -2.23
EMP3P54852 MIR1287-201ENST00000408492 90 ntBASIC1.09□□□□□ -2.23
EMP3P54852 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
EMP3P54852 RNU6-863P-201ENST00000515989 104 ntBASIC1.09□□□□□ -2.23
EMP3P54852 Y_RNA.335-201ENST00000365299 96 ntBASIC1.08□□□□□ -2.24
EMP3P54852 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
EMP3P54852 RNU6-127P-201ENST00000390897 107 ntBASIC1.07□□□□□ -2.24
EMP3P54852 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
EMP3P54852 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
EMP3P54852 MIR5087-201ENST00000635826 76 ntBASIC1.07□□□□□ -2.24
EMP3P54852 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
EMP3P54852 RNU6-929P-201ENST00000384429 107 ntBASIC1.06□□□□□ -2.24
EMP3P54852 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.06□□□□□ -2.24
EMP3P54852 CR383656.4-201ENST00000546909 122 ntBASIC1.06□□□□□ -2.24
EMP3P54852 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
EMP3P54852 RNU6-563P-201ENST00000364872 108 ntBASIC1.05□□□□□ -2.24
EMP3P54852 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
EMP3P54852 RNU6-695P-201ENST00000391157 104 ntBASIC1.05□□□□□ -2.24
EMP3P54852 Y_RNA.603-201ENST00000410571 108 ntBASIC1.05□□□□□ -2.24
EMP3P54852 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
EMP3P54852 SNORD44.1-201ENST00000363202 61 ntBASIC1.04□□□□□ -2.24
EMP3P54852 RNA5SP102-201ENST00000516865 106 ntBASIC1.04□□□□□ -2.24
EMP3P54852 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
EMP3P54852 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
EMP3P54852 SNORD18.2-201ENST00000459604 70 ntBASIC1.03□□□□□ -2.24
EMP3P54852 MIR148A-201ENST00000362215 68 ntBASIC1.02□□□□□ -2.25
EMP3P54852 MIR4280-201ENST00000582178 76 ntBASIC1.02□□□□□ -2.25
EMP3P54852 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
EMP3P54852 MIR23C-201ENST00000579846 100 ntBASIC1.01□□□□□ -2.25
EMP3P54852 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
EMP3P54852 AC120024.2-201ENST00000576526 175 ntBASIC1□□□□□ -2.25
EMP3P54852 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1□□□□□ -2.25
EMP3P54852 AL445193.1-201ENST00000441183 141 ntBASIC0.99□□□□□ -2.25
EMP3P54852 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
EMP3P54852 SNORD18C-201ENST00000362704 69 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms