Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.55□□□□□ -2.66
MSH6P52701 MIR548AG1-201ENST00000579932 66 ntBASIC-1.55□□□□□ -2.66
MSH6P52701 MIR2052-201ENST00000636055 55 ntBASIC-1.55□□□□□ -2.66
MSH6P52701 AC132825.6-201ENST00000638861 357 ntBASIC-1.55□□□□□ -2.66
MSH6P52701 RNU6-834P-201ENST00000362367 110 ntBASIC-1.56□□□□□ -2.66
MSH6P52701 RNU6-807P-201ENST00000516805 107 ntBASIC-1.56□□□□□ -2.66
MSH6P52701 AC093729.1-201ENST00000513074 128 ntBASIC-1.57□□□□□ -2.66
MSH6P52701 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.57□□□□□ -2.66
MSH6P52701 MIR4668-201ENST00000582284 70 ntBASIC-1.57□□□□□ -2.66
MSH6P52701 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.58□□□□□ -2.66
MSH6P52701 RNU4-61P-201ENST00000411243 107 ntBASIC-1.58□□□□□ -2.66
MSH6P52701 U7.5-201ENST00000517224 61 ntBASIC-1.58□□□□□ -2.66
MSH6P52701 RNA5SP26-201ENST00000362406 119 ntBASIC-1.59□□□□□ -2.66
MSH6P52701 RNU6-645P-201ENST00000364649 106 ntBASIC-1.59□□□□□ -2.66
MSH6P52701 RNU6-246P-201ENST00000384702 107 ntBASIC-1.59□□□□□ -2.66
MSH6P52701 RNU6-732P-201ENST00000516033 103 ntBASIC-1.59□□□□□ -2.66
MSH6P52701 SNORD19-201ENST00000391191 68 ntBASIC-1.59□□□□□ -2.66
MSH6P52701 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.59□□□□□ -2.66
MSH6P52701 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.6□□□□□ -2.67
MSH6P52701 MIR4770-201ENST00000579149 58 ntBASIC-1.6□□□□□ -2.67
MSH6P52701 RNU6-540P-201ENST00000384622 101 ntBASIC-1.61□□□□□ -2.67
MSH6P52701 RNU6-576P-201ENST00000390854 102 ntBASIC-1.61□□□□□ -2.67
MSH6P52701 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.61□□□□□ -2.67
MSH6P52701 RNU7-88P-201ENST00000458752 63 ntBASIC-1.61□□□□□ -2.67
MSH6P52701 RNY4P7-201ENST00000364600 96 ntBASIC-1.62□□□□□ -2.67
MSH6P52701 RNU6-557P-201ENST00000516842 110 ntBASIC-1.62□□□□□ -2.67
MSH6P52701 AP002795.1-201ENST00000534879 84 ntBASIC-1.62□□□□□ -2.67
MSH6P52701 MIR3675-201ENST00000583661 73 ntBASIC-1.62□□□□□ -2.67
MSH6P52701 SNORD116-22-201ENST00000384430 92 ntBASIC-1.63□□□□□ -2.67
MSH6P52701 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.63□□□□□ -2.67
MSH6P52701 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.63□□□□□ -2.67
MSH6P52701 MIR507-201ENST00000385234 94 ntBASIC-1.64□□□□□ -2.67
MSH6P52701 MIR889-201ENST00000401280 79 ntBASIC-1.64□□□□□ -2.67
MSH6P52701 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.64□□□□□ -2.67
MSH6P52701 MIR3671-201ENST00000580455 88 ntBASIC-1.64□□□□□ -2.67
MSH6P52701 MIR5683-201ENST00000636514 76 ntBASIC-1.64□□□□□ -2.67
MSH6P52701 MIR527-201ENST00000385244 85 ntBASIC-1.65□□□□□ -2.67
MSH6P52701 RNU6-303P-201ENST00000517091 106 ntBASIC-1.65□□□□□ -2.67
MSH6P52701 MIR4490-201ENST00000582647 84 ntBASIC-1.65□□□□□ -2.67
MSH6P52701 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.66□□□□□ -2.68
MSH6P52701 RNU6-497P-201ENST00000365316 104 ntBASIC-1.66□□□□□ -2.68
MSH6P52701 RNU6-22P-201ENST00000384355 107 ntBASIC-1.66□□□□□ -2.68
MSH6P52701 RNU2-51P-201ENST00000410708 197 ntBASIC-1.66□□□□□ -2.68
MSH6P52701 AL031737.1-201ENST00000450125 223 ntBASIC-1.66□□□□□ -2.68
MSH6P52701 RNU6-330P-201ENST00000363015 107 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 RNU6-219P-201ENST00000364728 107 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 RNU6-119P-201ENST00000364882 107 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 MIR548C-201ENST00000384815 97 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 RNU7-174P-201ENST00000516248 59 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 AP001318.4-201ENST00000616637 121 ntBASIC-1.67□□□□□ -2.68
MSH6P52701 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.68□□□□□ -2.68
MSH6P52701 RNU6-983P-201ENST00000516004 103 ntBASIC-1.68□□□□□ -2.68
MSH6P52701 RNU6-164P-201ENST00000364604 103 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 RNU6-686P-201ENST00000364839 107 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 AC074348.1-201ENST00000426503 132 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 MIR3668-201ENST00000582138 75 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 MIR4520-1-201ENST00000582609 70 ntBASIC-1.69□□□□□ -2.68
MSH6P52701 AL078595.1-201ENST00000404458 226 ntBASIC-1.7□□□□□ -2.68
MSH6P52701 MIR450A1-201ENST00000362262 91 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 RNU6-478P-201ENST00000363904 110 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 SNORA40.13-201ENST00000516379 120 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 MALAT1.1-201ENST00000618249 95 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 MIR548BB-201ENST00000626714 66 ntBASIC-1.71□□□□□ -2.68
MSH6P52701 RNU6-458P-201ENST00000384179 107 ntBASIC-1.72□□□□□ -2.68
MSH6P52701 RNU6-402P-201ENST00000410678 103 ntBASIC-1.72□□□□□ -2.68
MSH6P52701 RNU6-267P-201ENST00000516714 103 ntBASIC-1.72□□□□□ -2.68
MSH6P52701 U6.58-201ENST00000613107 107 ntBASIC-1.72□□□□□ -2.68
MSH6P52701 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.72□□□□□ -2.69
MSH6P52701 RNU6-587P-201ENST00000391282 106 ntBASIC-1.72□□□□□ -2.69
MSH6P52701 SNORD45.1-201ENST00000363181 77 ntBASIC-1.73□□□□□ -2.69
MSH6P52701 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.73□□□□□ -2.69
MSH6P52701 SNORA8.1-201ENST00000384250 140 ntBASIC-1.73□□□□□ -2.69
MSH6P52701 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.73□□□□□ -2.69
MSH6P52701 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 RNU6-696P-201ENST00000390834 107 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 RNY4P18-201ENST00000391107 89 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 MIR548Q-201ENST00000408404 100 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 RNU6-982P-201ENST00000516216 102 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 AC091912.2-201ENST00000624798 167 ntBASIC-1.74□□□□□ -2.69
MSH6P52701 RNU6-604P-201ENST00000390917 100 ntBASIC-1.75□□□□□ -2.69
MSH6P52701 RNU6-129P-201ENST00000391022 107 ntBASIC-1.75□□□□□ -2.69
MSH6P52701 AC090616.4-201ENST00000448026 115 ntBASIC-1.75□□□□□ -2.69
MSH6P52701 RNU6-698P-201ENST00000363523 107 ntBASIC-1.76□□□□□ -2.69
MSH6P52701 RNU6-34P-201ENST00000364874 107 ntBASIC-1.76□□□□□ -2.69
MSH6P52701 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.76□□□□□ -2.69
MSH6P52701 MIR6502-201ENST00000617296 76 ntBASIC-1.76□□□□□ -2.69
MSH6P52701 MIR6874-201ENST00000635894 71 ntBASIC-1.76□□□□□ -2.69
MSH6P52701 MIR548M-201ENST00000408260 86 ntBASIC-1.77□□□□□ -2.69
MSH6P52701 RPL35AP4-201ENST00000412007 102 ntBASIC-1.77□□□□□ -2.69
MSH6P52701 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.77□□□□□ -2.69
MSH6P52701 RNU6-313P-201ENST00000516317 112 ntBASIC-1.77□□□□□ -2.69
MSH6P52701 MIR1297-201ENST00000637311 77 ntBASIC-1.77□□□□□ -2.69
MSH6P52701 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.78□□□□□ -2.69
MSH6P52701 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.78□□□□□ -2.69
MSH6P52701 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms