Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
GDNFP39905 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
GDNFP39905 RNU6-1133P-201ENST00000410963 100 ntBASIC0.47□□□□□ -2.33
GDNFP39905 MIR548X-201ENST00000580069 75 ntBASIC0.47□□□□□ -2.33
GDNFP39905 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
GDNFP39905 RNU7-88P-201ENST00000458752 63 ntBASIC0.46□□□□□ -2.34
GDNFP39905 RNU7-151P-201ENST00000516930 53 ntBASIC0.46□□□□□ -2.34
GDNFP39905 AC069113.3-201ENST00000521019 150 ntBASIC0.46□□□□□ -2.34
GDNFP39905 MIR4464-201ENST00000580818 92 ntBASIC0.46□□□□□ -2.34
GDNFP39905 MIR6888-201ENST00000621977 67 ntBASIC0.46□□□□□ -2.34
GDNFP39905 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
GDNFP39905 RNU7-55P-201ENST00000459426 62 ntBASIC0.45□□□□□ -2.34
GDNFP39905 RNU6-1262P-201ENST00000516217 96 ntBASIC0.45□□□□□ -2.34
GDNFP39905 RNA5SP325-201ENST00000363756 130 ntBASIC0.44□□□□□ -2.34
GDNFP39905 RNA5SP163-201ENST00000410304 99 ntBASIC0.44□□□□□ -2.34
GDNFP39905 U7.5-201ENST00000517224 61 ntBASIC0.44□□□□□ -2.34
GDNFP39905 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
GDNFP39905 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
GDNFP39905 RNU6-35P-201ENST00000384530 107 ntBASIC0.43□□□□□ -2.34
GDNFP39905 MIR548H2-201ENST00000408874 88 ntBASIC0.43□□□□□ -2.34
GDNFP39905 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
GDNFP39905 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.43□□□□□ -2.34
GDNFP39905 RNU6-973P-201ENST00000364690 107 ntBASIC0.42□□□□□ -2.34
GDNFP39905 RNU6-900P-201ENST00000384498 102 ntBASIC0.42□□□□□ -2.34
GDNFP39905 RNU6-455P-201ENST00000384681 107 ntBASIC0.42□□□□□ -2.34
GDNFP39905 RNU6-696P-201ENST00000390834 107 ntBASIC0.42□□□□□ -2.34
GDNFP39905 MIR936-201ENST00000401264 98 ntBASIC0.42□□□□□ -2.34
GDNFP39905 CR383656.4-201ENST00000546909 122 ntBASIC0.42□□□□□ -2.34
GDNFP39905 AL445584.3-201ENST00000617173 78 ntBASIC0.42□□□□□ -2.34
GDNFP39905 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
GDNFP39905 MIR6507-201ENST00000613630 70 ntBASIC0.41□□□□□ -2.34
GDNFP39905 SNORD114-26-201ENST00000363543 72 ntBASIC0.4□□□□□ -2.35
GDNFP39905 SNORA62.4-201ENST00000365504 151 ntBASIC0.4□□□□□ -2.35
GDNFP39905 Y_RNA.540-201ENST00000384638 111 ntBASIC0.4□□□□□ -2.35
GDNFP39905 RNU6-180P-201ENST00000516697 61 ntBASIC0.4□□□□□ -2.35
GDNFP39905 RN7SL793P-201ENST00000583259 296 ntBASIC0.4□□□□□ -2.35
GDNFP39905 MIR5704-201ENST00000584029 77 ntBASIC0.4□□□□□ -2.35
GDNFP39905 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.35
GDNFP39905 MIR593-201ENST00000384856 100 ntBASIC0.39□□□□□ -2.35
GDNFP39905 MIR548AA1-201ENST00000384971 97 ntBASIC0.39□□□□□ -2.35
GDNFP39905 RNU7-160P-201ENST00000516660 62 ntBASIC0.39□□□□□ -2.35
GDNFP39905 RNU6-419P-201ENST00000517030 63 ntBASIC0.39□□□□□ -2.35
GDNFP39905 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
GDNFP39905 Y_RNA.69-201ENST00000362885 109 ntBASIC0.38□□□□□ -2.35
GDNFP39905 RNU6-995P-201ENST00000391244 107 ntBASIC0.38□□□□□ -2.35
GDNFP39905 RNU6-1267P-201ENST00000410747 107 ntBASIC0.38□□□□□ -2.35
GDNFP39905 AC096531.1-201ENST00000419107 107 ntBASIC0.38□□□□□ -2.35
GDNFP39905 RNU6-1174P-201ENST00000517278 101 ntBASIC0.38□□□□□ -2.35
GDNFP39905 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
GDNFP39905 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
GDNFP39905 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
GDNFP39905 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
GDNFP39905 RNU6-1206P-201ENST00000516339 103 ntBASIC0.37□□□□□ -2.35
GDNFP39905 RNA5SP480-201ENST00000516840 109 ntBASIC0.37□□□□□ -2.35
GDNFP39905 MIR8068-201ENST00000618032 68 ntBASIC0.37□□□□□ -2.35
GDNFP39905 RNU6-924P-201ENST00000362926 108 ntBASIC0.36□□□□□ -2.35
GDNFP39905 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
GDNFP39905 RNU6-930P-201ENST00000390938 100 ntBASIC0.36□□□□□ -2.35
GDNFP39905 MIR148A-201ENST00000362215 68 ntBASIC0.35□□□□□ -2.35
GDNFP39905 RNA5SP193-201ENST00000410353 107 ntBASIC0.35□□□□□ -2.35
GDNFP39905 SNORD57-201ENST00000448188 72 ntBASIC0.35□□□□□ -2.35
GDNFP39905 AC010487.4-201ENST00000637027 61 ntBASIC0.35□□□□□ -2.35
GDNFP39905 MIR610-201ENST00000385139 96 ntBASIC0.34□□□□□ -2.36
GDNFP39905 MIR892B-201ENST00000401279 77 ntBASIC0.34□□□□□ -2.36
GDNFP39905 AC104408.1-201ENST00000605241 170 ntBASIC0.34□□□□□ -2.36
GDNFP39905 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.34□□□□□ -2.36
GDNFP39905 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
GDNFP39905 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
GDNFP39905 RNU6-901P-201ENST00000384593 106 ntBASIC0.33□□□□□ -2.36
GDNFP39905 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
GDNFP39905 SNORD63.1-201ENST00000516178 80 ntBASIC0.33□□□□□ -2.36
GDNFP39905 SNORD56B-201ENST00000384713 71 ntBASIC0.32□□□□□ -2.36
GDNFP39905 MIR124-2-201ENST00000385081 109 ntBASIC0.32□□□□□ -2.36
GDNFP39905 MIR125B1-201ENST00000385236 88 ntBASIC0.32□□□□□ -2.36
GDNFP39905 Y_RNA.613-201ENST00000410726 97 ntBASIC0.32□□□□□ -2.36
GDNFP39905 MIR6854-201ENST00000614935 69 ntBASIC0.32□□□□□ -2.36
GDNFP39905 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
GDNFP39905 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
GDNFP39905 MIR145-201ENST00000384967 88 ntBASIC0.31□□□□□ -2.36
GDNFP39905 AC244250.2-201ENST00000418731 148 ntBASIC0.31□□□□□ -2.36
GDNFP39905 RNU6-828P-201ENST00000364876 107 ntBASIC0.3□□□□□ -2.36
GDNFP39905 RNA5SP214-201ENST00000363378 118 ntBASIC0.29□□□□□ -2.36
GDNFP39905 RNU7-165P-201ENST00000458864 60 ntBASIC0.29□□□□□ -2.36
GDNFP39905 MIR1273G-201ENST00000577677 100 ntBASIC0.29□□□□□ -2.36
GDNFP39905 Y_RNA.139-201ENST00000363464 102 ntBASIC0.28□□□□□ -2.36
GDNFP39905 RNU6-974P-201ENST00000384099 108 ntBASIC0.28□□□□□ -2.36
GDNFP39905 AL445193.1-201ENST00000441183 141 ntBASIC0.28□□□□□ -2.36
GDNFP39905 RNU7-159P-201ENST00000459284 62 ntBASIC0.28□□□□□ -2.36
GDNFP39905 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
GDNFP39905 MIR548F3-201ENST00000408509 87 ntBASIC0.27□□□□□ -2.37
GDNFP39905 AC114755.3-201ENST00000481111 251 ntBASIC0.27□□□□□ -2.37
GDNFP39905 RNU6-1238P-201ENST00000517215 102 ntBASIC0.27□□□□□ -2.37
GDNFP39905 SNORD114-5-201ENST00000362928 70 ntBASIC0.26□□□□□ -2.37
GDNFP39905 RNU6-838P-201ENST00000363399 108 ntBASIC0.26□□□□□ -2.37
GDNFP39905 MIR4743-201ENST00000584576 69 ntBASIC0.26□□□□□ -2.37
GDNFP39905 MIR655-201ENST00000362159 97 ntBASIC0.25□□□□□ -2.37
GDNFP39905 RNU6-732P-201ENST00000516033 103 ntBASIC0.25□□□□□ -2.37
GDNFP39905 MIR3170-201ENST00000582699 77 ntBASIC0.25□□□□□ -2.37
GDNFP39905 MIR6779-201ENST00000617283 64 ntBASIC0.25□□□□□ -2.37
GDNFP39905 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms