Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-520P-201ENST00000384717 104 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 MIR106A-201ENST00000384870 81 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU7-119P-201ENST00000459279 63 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6-848P-201ENST00000515948 107 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6-617P-201ENST00000516147 107 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6-473P-201ENST00000516164 107 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6-1049P-201ENST00000516414 107 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 uc_338.36-201ENST00000622331 158 ntBASIC0.3□□□□□ -2.36
HOXC13P31276 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 RNU6-458P-201ENST00000384179 107 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 MIR643-201ENST00000385267 97 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 RNU6-808P-201ENST00000391233 108 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 RNU7-154P-201ENST00000516194 62 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 RNA5SP470-201ENST00000516463 106 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 AL353803.5-201ENST00000599815 141 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 MIR7110-201ENST00000612638 86 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 U6.58-201ENST00000613107 107 ntBASIC0.29□□□□□ -2.36
HOXC13P31276 SNORD1B-201ENST00000363091 84 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 RNU6-810P-201ENST00000364001 107 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 RNU6-246P-201ENST00000384702 107 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 RNU6-127P-201ENST00000390897 107 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 MIR876-201ENST00000401147 81 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 RNU6-172P-201ENST00000411000 93 ntBASIC0.28□□□□□ -2.36
HOXC13P31276 MIR579-201ENST00000385221 98 ntBASIC0.27□□□□□ -2.37
HOXC13P31276 RNA5SP285-201ENST00000516619 119 ntBASIC0.27□□□□□ -2.37
HOXC13P31276 SNORA40.16-201ENST00000517238 121 ntBASIC0.27□□□□□ -2.37
HOXC13P31276 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.27□□□□□ -2.37
HOXC13P31276 snoR1.1-201ENST00000628177 80 ntBASIC0.27□□□□□ -2.37
HOXC13P31276 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
HOXC13P31276 MIR4432-201ENST00000581823 84 ntBASIC0.26□□□□□ -2.37
HOXC13P31276 MIR6759-201ENST00000638110 65 ntBASIC0.26□□□□□ -2.37
HOXC13P31276 RNA5SP98-201ENST00000363158 137 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 RNU6-598P-201ENST00000364017 105 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 U2.18-201ENST00000622185 84 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 MIR6514-201ENST00000622549 70 ntBASIC0.25□□□□□ -2.37
HOXC13P31276 MIR429-201ENST00000362106 83 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 RNU6-753P-201ENST00000363926 107 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 SNORD115-23-201ENST00000364461 82 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 SNORA40B-201ENST00000385573 128 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 RNU6-1133P-201ENST00000410963 100 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 RNU7-88P-201ENST00000458752 63 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 AC108676.2-201ENST00000605225 163 ntBASIC0.24□□□□□ -2.37
HOXC13P31276 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.23□□□□□ -2.37
HOXC13P31276 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
HOXC13P31276 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
HOXC13P31276 RNU4-88P-201ENST00000411220 86 ntBASIC0.23□□□□□ -2.37
HOXC13P31276 Y_RNA.698-201ENST00000516798 118 ntBASIC0.23□□□□□ -2.37
HOXC13P31276 MIR4490-201ENST00000582647 84 ntBASIC0.23□□□□□ -2.37
HOXC13P31276 RNU6-455P-201ENST00000384681 107 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 RNU6-980P-201ENST00000516925 103 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 RNU7-151P-201ENST00000516930 53 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 U7.5-201ENST00000517224 61 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 MIR4802-201ENST00000581881 80 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 MIR4636-201ENST00000582271 80 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 MIR6888-201ENST00000621977 67 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 AL391099.1-201ENST00000624635 187 ntBASIC0.22□□□□□ -2.37
HOXC13P31276 Y_RNA.379-201ENST00000365653 102 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 RNU6-1262P-201ENST00000516217 96 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 MIR4464-201ENST00000580818 92 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.21□□□□□ -2.38
HOXC13P31276 MIR5704-201ENST00000584029 77 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
HOXC13P31276 RNU4-33P-201ENST00000364316 85 ntBASIC0.2□□□□□ -2.38
HOXC13P31276 MIR548H2-201ENST00000408874 88 ntBASIC0.2□□□□□ -2.38
HOXC13P31276 RNU7-55P-201ENST00000459426 62 ntBASIC0.2□□□□□ -2.38
HOXC13P31276 MIR6507-201ENST00000613630 70 ntBASIC0.2□□□□□ -2.38
HOXC13P31276 MIR8068-201ENST00000618032 68 ntBASIC0.2□□□□□ -2.38
HOXC13P31276 RNU6-900P-201ENST00000384498 102 ntBASIC0.19□□□□□ -2.38
HOXC13P31276 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.19□□□□□ -2.38
HOXC13P31276 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
HOXC13P31276 MIR548X-201ENST00000580069 75 ntBASIC0.19□□□□□ -2.38
HOXC13P31276 AL445584.3-201ENST00000617173 78 ntBASIC0.19□□□□□ -2.38
HOXC13P31276 RNU6-973P-201ENST00000364690 107 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 RNU6-696P-201ENST00000390834 107 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 RNU6-1267P-201ENST00000410747 107 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 RNU6-180P-201ENST00000516697 61 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 RNU6-1174P-201ENST00000517278 101 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 MIR6086-201ENST00000638065 55 ntBASIC0.18□□□□□ -2.38
HOXC13P31276 SNORA62.4-201ENST00000365504 151 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 RNU6-901P-201ENST00000384593 106 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 MIR548AA1-201ENST00000384971 97 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 MIR124-2-201ENST00000385081 109 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 RNU6-995P-201ENST00000391244 107 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 AL445193.1-201ENST00000441183 141 ntBASIC0.17□□□□□ -2.38
HOXC13P31276 Y_RNA.69-201ENST00000362885 109 ntBASIC0.16□□□□□ -2.38
HOXC13P31276 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
HOXC13P31276 SNORD56B-201ENST00000384713 71 ntBASIC0.16□□□□□ -2.38
HOXC13P31276 MIR145-201ENST00000384967 88 ntBASIC0.16□□□□□ -2.38
HOXC13P31276 AC096531.1-201ENST00000419107 107 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 280.6 ms