Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RNU6-901P-201ENST00000384593 106 ntBASIC-0.33□□□□□ -2.46
SMARCA1P28370 RNU4-63P-201ENST00000411313 118 ntBASIC-0.33□□□□□ -2.46
SMARCA1P28370 AC096531.1-201ENST00000419107 107 ntBASIC-0.33□□□□□ -2.46
SMARCA1P28370 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
SMARCA1P28370 MIR8053-201ENST00000613344 75 ntBASIC-0.33□□□□□ -2.46
SMARCA1P28370 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.33□□□□□ -2.46
SMARCA1P28370 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
SMARCA1P28370 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
SMARCA1P28370 MIR4280-201ENST00000582178 76 ntBASIC-0.34□□□□□ -2.46
SMARCA1P28370 snoR1.1-201ENST00000628177 80 ntBASIC-0.34□□□□□ -2.46
SMARCA1P28370 SNORD113.1-201ENST00000363280 73 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 RNY1P9-201ENST00000532431 109 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 MIR548AX-201ENST00000580117 73 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 MIR5704-201ENST00000584029 77 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 U2.7-201ENST00000619197 100 ntBASIC-0.35□□□□□ -2.47
SMARCA1P28370 RNU6-587P-201ENST00000391282 106 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 MIR1468-201ENST00000410600 86 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 RNU6-687P-201ENST00000516443 89 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
SMARCA1P28370 RNA5SP66-201ENST00000517178 101 ntBASIC-0.37□□□□□ -2.47
SMARCA1P28370 MIR154-201ENST00000385243 84 ntBASIC-0.38□□□□□ -2.47
SMARCA1P28370 RNA5SP470-201ENST00000516463 106 ntBASIC-0.38□□□□□ -2.47
SMARCA1P28370 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
SMARCA1P28370 AL353803.5-201ENST00000599815 141 ntBASIC-0.38□□□□□ -2.47
SMARCA1P28370 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
SMARCA1P28370 RNU6-411P-201ENST00000384451 107 ntBASIC-0.39□□□□□ -2.47
SMARCA1P28370 MIR8068-201ENST00000618032 68 ntBASIC-0.39□□□□□ -2.47
SMARCA1P28370 SNORD115-31-201ENST00000365318 82 ntBASIC-0.4□□□□□ -2.47
SMARCA1P28370 MIR519A2-201ENST00000384990 87 ntBASIC-0.4□□□□□ -2.47
SMARCA1P28370 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 MIR548C-201ENST00000384815 97 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 AC114755.3-201ENST00000481111 251 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 RNU6-518P-201ENST00000516056 96 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.41□□□□□ -2.48
SMARCA1P28370 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 SNX3P1X-201ENST00000414887 175 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 AL021921.1-201ENST00000442774 93 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 MTND4LP1-201ENST00000446263 157 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.42□□□□□ -2.48
SMARCA1P28370 SNORD38.3-201ENST00000516599 73 ntBASIC-0.43□□□□□ -2.48
SMARCA1P28370 MIR6854-201ENST00000614935 69 ntBASIC-0.43□□□□□ -2.48
SMARCA1P28370 MIR889-201ENST00000401280 79 ntBASIC-0.44□□□□□ -2.48
SMARCA1P28370 RNU6-523P-201ENST00000516304 54 ntBASIC-0.44□□□□□ -2.48
SMARCA1P28370 MIR6851-201ENST00000617060 67 ntBASIC-0.44□□□□□ -2.48
SMARCA1P28370 AC093726.3-201ENST00000637588 150 ntBASIC-0.44□□□□□ -2.48
SMARCA1P28370 RNU6-668P-201ENST00000364180 107 ntBASIC-0.45□□□□□ -2.48
SMARCA1P28370 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.45□□□□□ -2.48
SMARCA1P28370 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.45□□□□□ -2.48
SMARCA1P28370 RNU7-154P-201ENST00000516194 62 ntBASIC-0.45□□□□□ -2.48
SMARCA1P28370 MIR4464-201ENST00000580818 92 ntBASIC-0.45□□□□□ -2.48
SMARCA1P28370 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 RNU6-895P-201ENST00000384125 103 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 SNORD116-24-201ENST00000384549 92 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 MIR4723-201ENST00000585070 81 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
SMARCA1P28370 SNORA62.4-201ENST00000365504 151 ntBASIC-0.47□□□□□ -2.48
SMARCA1P28370 RNU7-174P-201ENST00000516248 59 ntBASIC-0.47□□□□□ -2.48
SMARCA1P28370 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.47□□□□□ -2.48
SMARCA1P28370 RNA5SP169-201ENST00000517268 117 ntBASIC-0.48□□□□□ -2.49
SMARCA1P28370 MIR3681-201ENST00000580089 72 ntBASIC-0.48□□□□□ -2.49
SMARCA1P28370 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.49□□□□□ -2.49
SMARCA1P28370 MIR548AG1-201ENST00000579932 66 ntBASIC-0.49□□□□□ -2.49
SMARCA1P28370 MIR6888-201ENST00000621977 67 ntBASIC-0.49□□□□□ -2.49
SMARCA1P28370 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
SMARCA1P28370 MIR517B-201ENST00000385102 67 ntBASIC-0.5□□□□□ -2.49
SMARCA1P28370 RNU6-634P-201ENST00000459134 106 ntBASIC-0.5□□□□□ -2.49
SMARCA1P28370 AL445584.3-201ENST00000617173 78 ntBASIC-0.51□□□□□ -2.49
SMARCA1P28370 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.52□□□□□ -2.49
SMARCA1P28370 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.52□□□□□ -2.49
SMARCA1P28370 MIR4662A-201ENST00000637499 67 ntBASIC-0.52□□□□□ -2.49
SMARCA1P28370 RNU6-776P-201ENST00000364403 104 ntBASIC-0.53□□□□□ -2.49
SMARCA1P28370 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.53□□□□□ -2.49
SMARCA1P28370 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
SMARCA1P28370 RNU6-540P-201ENST00000384622 101 ntBASIC-0.53□□□□□ -2.49
SMARCA1P28370 RNA5SP215-201ENST00000363440 122 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 MT-TQ-201ENST00000387372 72 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 MIR548V-201ENST00000584165 80 ntBASIC-0.54□□□□□ -2.5
SMARCA1P28370 RNU6-698P-201ENST00000363523 107 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 RNU6-34P-201ENST00000364874 107 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 MIR518B-201ENST00000385127 83 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 MIR204-201ENST00000385200 110 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.55□□□□□ -2.5
SMARCA1P28370 U4.4-201ENST00000620626 117 ntBASIC-0.55□□□□□ -2.5
SMARCA1P28370 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.56□□□□□ -2.5
SMARCA1P28370 MIR124-2-201ENST00000385081 109 ntBASIC-0.56□□□□□ -2.5
SMARCA1P28370 MIR630-201ENST00000384957 97 ntBASIC-0.57□□□□□ -2.5
SMARCA1P28370 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.58□□□□□ -2.5
SMARCA1P28370 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms