Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-34P-201ENST00000364874 107 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 Y_RNA.386-201ENST00000383913 105 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 MIR548C-201ENST00000384815 97 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 MIR9-2-201ENST00000384838 87 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 AC104692.1-201ENST00000472406 90 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.06□□□□□ -2.4
COL6A2P12110 RNU7-154P-201ENST00000516194 62 ntBASIC0.06□□□□□ -2.4
COL6A2P12110 RNU6-302P-201ENST00000365249 107 ntBASIC0.05□□□□□ -2.4
COL6A2P12110 MIR519A2-201ENST00000384990 87 ntBASIC0.05□□□□□ -2.4
COL6A2P12110 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
COL6A2P12110 MIR655-201ENST00000362159 97 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 RNU6-929P-201ENST00000384429 107 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 RNU6-455P-201ENST00000384681 107 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 RNU6-518P-201ENST00000516056 96 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 RNU6-758P-201ENST00000516292 89 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 AC103706.3-201ENST00000636297 85 ntBASIC0.03□□□□□ -2.4
COL6A2P12110 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 RNU6-973P-201ENST00000364690 107 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 RNU6-30P-201ENST00000384561 107 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 RNA5SP25-201ENST00000410815 110 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 AC244250.2-201ENST00000418731 148 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 MIR4511-201ENST00000582784 87 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 MIR548V-201ENST00000584165 80 ntBASIC0.02□□□□□ -2.41
COL6A2P12110 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
COL6A2P12110 SNORD114-15-201ENST00000364687 72 ntBASIC0.01□□□□□ -2.41
COL6A2P12110 RNU6-471P-201ENST00000383944 106 ntBASIC0.01□□□□□ -2.41
COL6A2P12110 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.01□□□□□ -2.41
COL6A2P12110 MIR1295B-201ENST00000636144 60 ntBASIC0.01□□□□□ -2.41
COL6A2P12110 RNA5SP368-201ENST00000364298 116 ntBASIC0□□□□□ -2.41
COL6A2P12110 Y_RNA.246-201ENST00000364495 108 ntBASIC0□□□□□ -2.41
COL6A2P12110 MIR4432-201ENST00000581823 84 ntBASIC0□□□□□ -2.41
COL6A2P12110 AL391099.1-201ENST00000624635 187 ntBASIC0□□□□□ -2.41
COL6A2P12110 SNORD113-2-201ENST00000391082 72 ntBASIC-0.01□□□□□ -2.41
COL6A2P12110 AC096531.1-201ENST00000419107 107 ntBASIC-0.01□□□□□ -2.41
COL6A2P12110 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.01□□□□□ -2.41
COL6A2P12110 U4.4-201ENST00000620626 117 ntBASIC-0.01□□□□□ -2.41
COL6A2P12110 snoR1.1-201ENST00000628177 80 ntBASIC-0.01□□□□□ -2.41
COL6A2P12110 MIR630-201ENST00000384957 97 ntBASIC-0.02□□□□□ -2.41
COL6A2P12110 AL353803.5-201ENST00000599815 141 ntBASIC-0.02□□□□□ -2.41
COL6A2P12110 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.03□□□□□ -2.41
COL6A2P12110 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
COL6A2P12110 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.03□□□□□ -2.41
COL6A2P12110 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.03□□□□□ -2.41
COL6A2P12110 RNA5SP67-201ENST00000516422 131 ntBASIC-0.04□□□□□ -2.42
COL6A2P12110 MIR4493-201ENST00000584016 73 ntBASIC-0.04□□□□□ -2.42
COL6A2P12110 AP001180.6-201ENST00000584918 159 ntBASIC-0.04□□□□□ -2.42
COL6A2P12110 uc_338.36-201ENST00000622331 158 ntBASIC-0.04□□□□□ -2.42
COL6A2P12110 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.04□□□□□ -2.42
COL6A2P12110 SNORD49B-201ENST00000365172 72 ntBASIC-0.05□□□□□ -2.42
COL6A2P12110 MIR604-201ENST00000384880 94 ntBASIC-0.05□□□□□ -2.42
COL6A2P12110 SNORA18.1-201ENST00000363418 128 ntBASIC-0.06□□□□□ -2.42
COL6A2P12110 SNORA62.4-201ENST00000365504 151 ntBASIC-0.06□□□□□ -2.42
COL6A2P12110 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.07□□□□□ -2.42
COL6A2P12110 SNORD56B-201ENST00000384713 71 ntBASIC-0.07□□□□□ -2.42
COL6A2P12110 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
COL6A2P12110 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
COL6A2P12110 RNU6-788P-201ENST00000390967 104 ntBASIC-0.08□□□□□ -2.42
COL6A2P12110 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
COL6A2P12110 RNU6-92P-201ENST00000605893 104 ntBASIC-0.08□□□□□ -2.42
COL6A2P12110 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
COL6A2P12110 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 RNU6-901P-201ENST00000384593 106 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
COL6A2P12110 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 AC125388.1-201ENST00000459631 156 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 MIR5704-201ENST00000584029 77 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 AC108676.2-201ENST00000605225 163 ntBASIC-0.1□□□□□ -2.43
COL6A2P12110 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
COL6A2P12110 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.11□□□□□ -2.43
COL6A2P12110 MIR548AG1-201ENST00000579932 66 ntBASIC-0.11□□□□□ -2.43
COL6A2P12110 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
COL6A2P12110 SNORA25.5-201ENST00000363782 126 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 AC110620.1-201ENST00000416042 228 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 RPS29P8-201ENST00000445109 171 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 MIR4464-201ENST00000580818 92 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 MIR4280-201ENST00000582178 76 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 MIR4263-201ENST00000584745 83 ntBASIC-0.12□□□□□ -2.43
COL6A2P12110 MIR101-1-201ENST00000362265 75 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 RNU6-669P-201ENST00000365575 107 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 AL445193.1-201ENST00000441183 141 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 MIR3666-201ENST00000607845 111 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 MIR8068-201ENST00000618032 68 ntBASIC-0.13□□□□□ -2.43
COL6A2P12110 SNORD114-28-201ENST00000363610 72 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 SNORD95.1-201ENST00000364099 68 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
COL6A2P12110 SNORD57-201ENST00000448188 72 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 MIR8064-201ENST00000612863 90 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 MIR6854-201ENST00000614935 69 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 MIR6888-201ENST00000621977 67 ntBASIC-0.14□□□□□ -2.43
COL6A2P12110 RNA5SP331-201ENST00000364986 107 ntBASIC-0.15□□□□□ -2.43
COL6A2P12110 RNA5SP451-201ENST00000410588 110 ntBASIC-0.15□□□□□ -2.43
COL6A2P12110 AC114755.3-201ENST00000481111 251 ntBASIC-0.15□□□□□ -2.43
COL6A2P12110 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.15□□□□□ -2.43
COL6A2P12110 RNA5SP66-201ENST00000517178 101 ntBASIC-0.15□□□□□ -2.43
COL6A2P12110 MIR527-201ENST00000385244 85 ntBASIC-0.16□□□□□ -2.44
COL6A2P12110 MIR6851-201ENST00000617060 67 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 278.8 ms