Protein–RNA interactions for Protein: P10600

TGFB3, Transforming growth factor beta-3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3P10600 MIR6888-201ENST00000621977 67 ntBASIC0.18□□□□□ -2.38
TGFB3P10600 Y_RNA.109-201ENST00000363215 102 ntBASIC0.17□□□□□ -2.38
TGFB3P10600 RNU6-929P-201ENST00000384429 107 ntBASIC0.17□□□□□ -2.38
TGFB3P10600 AL021921.1-201ENST00000442774 93 ntBASIC0.17□□□□□ -2.38
TGFB3P10600 RNU7-55P-201ENST00000459426 62 ntBASIC0.17□□□□□ -2.38
TGFB3P10600 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.17□□□□□ -2.38
TGFB3P10600 RNU6-122P-201ENST00000516818 107 ntBASIC0.17□□□□□ -2.38
TGFB3P10600 RNA5SP98-201ENST00000363158 137 ntBASIC0.16□□□□□ -2.38
TGFB3P10600 RNU6-455P-201ENST00000384681 107 ntBASIC0.16□□□□□ -2.38
TGFB3P10600 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
TGFB3P10600 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
TGFB3P10600 Y_RNA.74-201ENST00000362911 99 ntBASIC0.15□□□□□ -2.39
TGFB3P10600 AC079150.2-201ENST00000443733 78 ntBASIC0.15□□□□□ -2.39
TGFB3P10600 CR383656.4-201ENST00000546909 122 ntBASIC0.15□□□□□ -2.39
TGFB3P10600 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
TGFB3P10600 SNORA42.1-201ENST00000363515 137 ntBASIC0.14□□□□□ -2.39
TGFB3P10600 RNU7-165P-201ENST00000458864 60 ntBASIC0.14□□□□□ -2.39
TGFB3P10600 RNU7-154P-201ENST00000516194 62 ntBASIC0.14□□□□□ -2.39
TGFB3P10600 SNORD1B-201ENST00000363091 84 ntBASIC0.13□□□□□ -2.39
TGFB3P10600 MIR4432-201ENST00000581823 84 ntBASIC0.13□□□□□ -2.39
TGFB3P10600 U2.18-201ENST00000622185 84 ntBASIC0.13□□□□□ -2.39
TGFB3P10600 AL391099.1-201ENST00000624635 187 ntBASIC0.13□□□□□ -2.39
TGFB3P10600 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.13□□□□□ -2.39
TGFB3P10600 RNU6-302P-201ENST00000365249 107 ntBASIC0.12□□□□□ -2.39
TGFB3P10600 RNU6-499P-201ENST00000365615 107 ntBASIC0.12□□□□□ -2.39
TGFB3P10600 SNORD116-16-201ENST00000384533 92 ntBASIC0.12□□□□□ -2.39
TGFB3P10600 AC114755.3-201ENST00000481111 251 ntBASIC0.12□□□□□ -2.39
TGFB3P10600 AL445584.3-201ENST00000617173 78 ntBASIC0.12□□□□□ -2.39
TGFB3P10600 RNU6-598P-201ENST00000364017 105 ntBASIC0.11□□□□□ -2.39
TGFB3P10600 RNU6-458P-201ENST00000384179 107 ntBASIC0.11□□□□□ -2.39
TGFB3P10600 MIR527-201ENST00000385244 85 ntBASIC0.11□□□□□ -2.39
TGFB3P10600 U6.58-201ENST00000613107 107 ntBASIC0.11□□□□□ -2.39
TGFB3P10600 Y_RNA.236-201ENST00000364427 111 ntBASIC0.1□□□□□ -2.39
TGFB3P10600 AC096531.1-201ENST00000419107 107 ntBASIC0.1□□□□□ -2.39
TGFB3P10600 SNORD2-201ENST00000459163 69 ntBASIC0.1□□□□□ -2.39
TGFB3P10600 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.1□□□□□ -2.39
TGFB3P10600 MIR3938-201ENST00000582157 103 ntBASIC0.1□□□□□ -2.39
TGFB3P10600 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
TGFB3P10600 RNU6-940P-201ENST00000363433 104 ntBASIC0.09□□□□□ -2.4
TGFB3P10600 RNU6-973P-201ENST00000364690 107 ntBASIC0.09□□□□□ -2.4
TGFB3P10600 RNU6-900P-201ENST00000384498 102 ntBASIC0.09□□□□□ -2.4
TGFB3P10600 RNU7-88P-201ENST00000458752 63 ntBASIC0.09□□□□□ -2.4
TGFB3P10600 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.09□□□□□ -2.4
TGFB3P10600 MIR148A-201ENST00000362215 68 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 MIR892B-201ENST00000401279 77 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 AL445193.1-201ENST00000441183 141 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 RNU7-159P-201ENST00000459284 62 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 U7.5-201ENST00000517224 61 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 MIR4280-201ENST00000582178 76 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
TGFB3P10600 RNU6-1312P-201ENST00000362425 108 ntBASIC0.07□□□□□ -2.4
TGFB3P10600 RNA5SP470-201ENST00000516463 106 ntBASIC0.07□□□□□ -2.4
TGFB3P10600 RNU6-231P-201ENST00000517122 103 ntBASIC0.07□□□□□ -2.4
TGFB3P10600 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
TGFB3P10600 AC108676.2-201ENST00000605225 163 ntBASIC0.07□□□□□ -2.4
TGFB3P10600 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
TGFB3P10600 MIR579-201ENST00000385221 98 ntBASIC0.06□□□□□ -2.4
TGFB3P10600 SNORD38.3-201ENST00000516599 73 ntBASIC0.06□□□□□ -2.4
TGFB3P10600 SNORA40.16-201ENST00000517238 121 ntBASIC0.06□□□□□ -2.4
TGFB3P10600 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
TGFB3P10600 RNU6-172P-201ENST00000411000 93 ntBASIC0.05□□□□□ -2.4
TGFB3P10600 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
TGFB3P10600 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
TGFB3P10600 AL590491.3-201ENST00000610731 82 ntBASIC0.05□□□□□ -2.4
TGFB3P10600 MIR7978-201ENST00000636158 59 ntBASIC0.05□□□□□ -2.4
TGFB3P10600 MIR124-2-201ENST00000385081 109 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 MTND4LP19-201ENST00000403051 166 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 RNU6-1133P-201ENST00000410963 100 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 RNA5SP169-201ENST00000517268 117 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 snoR1.1-201ENST00000628177 80 ntBASIC0.04□□□□□ -2.4
TGFB3P10600 SNORD116.2-201ENST00000391251 93 ntBASIC0.03□□□□□ -2.4
TGFB3P10600 RNU6-1262P-201ENST00000516217 96 ntBASIC0.03□□□□□ -2.4
TGFB3P10600 RNU6-810P-201ENST00000364001 107 ntBASIC0.02□□□□□ -2.41
TGFB3P10600 SNORD49B-201ENST00000365172 72 ntBASIC0.02□□□□□ -2.41
TGFB3P10600 AP002795.1-201ENST00000534879 84 ntBASIC0.02□□□□□ -2.41
TGFB3P10600 MIR6854-201ENST00000614935 69 ntBASIC0.02□□□□□ -2.41
TGFB3P10600 Y_RNA.30-201ENST00000362572 97 ntBASIC0.01□□□□□ -2.41
TGFB3P10600 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
TGFB3P10600 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
TGFB3P10600 RNU6-1174P-201ENST00000517278 101 ntBASIC0.01□□□□□ -2.41
TGFB3P10600 MIR4490-201ENST00000582647 84 ntBASIC0.01□□□□□ -2.41
TGFB3P10600 MIR4743-201ENST00000584576 69 ntBASIC0.01□□□□□ -2.41
TGFB3P10600 SNORD114-11-201ENST00000363738 75 ntBASIC0□□□□□ -2.41
TGFB3P10600 RNU6-974P-201ENST00000384099 108 ntBASIC0□□□□□ -2.41
TGFB3P10600 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0□□□□□ -2.41
TGFB3P10600 RNU6-1267P-201ENST00000410747 107 ntBASIC0□□□□□ -2.41
TGFB3P10600 RNU7-151P-201ENST00000516930 53 ntBASIC-0.01□□□□□ -2.41
TGFB3P10600 RNU6-901P-201ENST00000384593 106 ntBASIC-0.02□□□□□ -2.41
TGFB3P10600 SNORD19-201ENST00000391191 68 ntBASIC-0.02□□□□□ -2.41
TGFB3P10600 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.02□□□□□ -2.41
TGFB3P10600 MIR6851-201ENST00000617060 67 ntBASIC-0.03□□□□□ -2.41
TGFB3P10600 MIR520D-201ENST00000385002 87 ntBASIC-0.04□□□□□ -2.42
TGFB3P10600 SNORD57-201ENST00000448188 72 ntBASIC-0.04□□□□□ -2.42
TGFB3P10600 MIR7110-201ENST00000612638 86 ntBASIC-0.04□□□□□ -2.42
TGFB3P10600 SNORD114-12-201ENST00000365400 75 ntBASIC-0.05□□□□□ -2.42
TGFB3P10600 RNU6-258P-201ENST00000390884 101 ntBASIC-0.05□□□□□ -2.42
TGFB3P10600 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms