Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MIR593-201ENST00000384856 100 ntBASIC0.18□□□□□ -2.38
SLC28A2O43868 AL021921.1-201ENST00000442774 93 ntBASIC0.18□□□□□ -2.38
SLC28A2O43868 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
SLC28A2O43868 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 Y_RNA.246-201ENST00000364495 108 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 Y_RNA.325-201ENST00000365171 122 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6-302P-201ENST00000365249 107 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6-1246P-201ENST00000391064 107 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 MIR6507-201ENST00000613630 70 ntBASIC0.17□□□□□ -2.38
SLC28A2O43868 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 SNORA25.5-201ENST00000363782 126 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR145-201ENST00000384967 88 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR892B-201ENST00000401279 77 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 MIR371B-201ENST00000638082 66 ntBASIC0.16□□□□□ -2.38
SLC28A2O43868 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 RNA5SP192-201ENST00000364404 120 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 SNORD113-2-201ENST00000391082 72 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.15□□□□□ -2.39
SLC28A2O43868 RNA5SP470-201ENST00000516463 106 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR548AG1-201ENST00000579932 66 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR4493-201ENST00000584016 73 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR4743-201ENST00000584576 69 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 RNU6-92P-201ENST00000605893 104 ntBASIC0.15□□□□□ -2.39
SLC28A2O43868 MIR409-201ENST00000362237 79 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 SNORD115-23-201ENST00000364461 82 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 RNU7-165P-201ENST00000458864 60 ntBASIC0.14□□□□□ -2.39
SLC28A2O43868 MIR148A-201ENST00000362215 68 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 Y_RNA.74-201ENST00000362911 99 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU7-55P-201ENST00000459426 62 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 RNU7-154P-201ENST00000516194 62 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SLC28A2O43868 SNORD114-5-201ENST00000362928 70 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNU6-669P-201ENST00000365575 107 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 MIR604-201ENST00000384880 94 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNA5SP67-201ENST00000516422 131 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 AL353803.5-201ENST00000599815 141 ntBASIC0.12□□□□□ -2.39
SLC28A2O43868 RNU6-900P-201ENST00000384498 102 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 RNU6-455P-201ENST00000384681 107 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 SNORA41B-201ENST00000384785 128 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 MIR4432-201ENST00000581823 84 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 AC108676.2-201ENST00000605225 163 ntBASIC0.11□□□□□ -2.39
SLC28A2O43868 SNORD60.1-201ENST00000362451 73 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 Y_RNA.282-201ENST00000364793 102 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 uc_338.36-201ENST00000622331 158 ntBASIC0.1□□□□□ -2.39
SLC28A2O43868 RNU6-940P-201ENST00000363433 104 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 AC244250.2-201ENST00000418731 148 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 RNU6-122P-201ENST00000516818 107 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 MIR466-201ENST00000580653 84 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 AL391099.1-201ENST00000624635 187 ntBASIC0.09□□□□□ -2.4
SLC28A2O43868 MIR655-201ENST00000362159 97 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 RNU6-973P-201ENST00000364690 107 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 snoR1.1-201ENST00000628177 80 ntBASIC0.08□□□□□ -2.4
SLC28A2O43868 RNU6-929P-201ENST00000384429 107 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 MIR527-201ENST00000385244 85 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 RNA5SP266-201ENST00000410273 108 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 AC096531.1-201ENST00000419107 107 ntBASIC0.07□□□□□ -2.4
SLC28A2O43868 RNU6-1133P-201ENST00000410963 100 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 Y_RNA.698-201ENST00000516798 118 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 MIR4464-201ENST00000580818 92 ntBASIC0.06□□□□□ -2.4
SLC28A2O43868 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 SNORD116-16-201ENST00000384533 92 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 MIR6888-201ENST00000621977 67 ntBASIC0.05□□□□□ -2.4
SLC28A2O43868 SNORD95.1-201ENST00000364099 68 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 SNORD56B-201ENST00000384713 71 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 MIR5704-201ENST00000584029 77 ntBASIC0.04□□□□□ -2.4
SLC28A2O43868 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
SLC28A2O43868 Y_RNA.109-201ENST00000363215 102 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 RNU6-46P-201ENST00000383860 107 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 MIR3938-201ENST00000582157 103 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 MIR8068-201ENST00000618032 68 ntBASIC0.03□□□□□ -2.4
SLC28A2O43868 RNU6-1079P-201ENST00000362861 110 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 SNORA62.4-201ENST00000365504 151 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 RNU6-246P-201ENST00000384702 107 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 MIR633-201ENST00000384821 98 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 AL445584.3-201ENST00000617173 78 ntBASIC0.02□□□□□ -2.41
SLC28A2O43868 RNU6-499P-201ENST00000365615 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 RNU6-458P-201ENST00000384179 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 AC104692.1-201ENST00000472406 90 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 MIR4280-201ENST00000582178 76 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 U6.58-201ENST00000613107 107 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
SLC28A2O43868 MIR101-1-201ENST00000362265 75 ntBASIC0□□□□□ -2.41
SLC28A2O43868 Y_RNA.236-201ENST00000364427 111 ntBASIC0□□□□□ -2.41
SLC28A2O43868 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
SLC28A2O43868 RNU6-901P-201ENST00000384593 106 ntBASIC0□□□□□ -2.41
SLC28A2O43868 Y_RNA.610-201ENST00000410681 103 ntBASIC0□□□□□ -2.41
SLC28A2O43868 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
SLC28A2O43868 MIR6854-201ENST00000614935 69 ntBASIC0□□□□□ -2.41
SLC28A2O43868 RNU6-446P-201ENST00000362827 106 ntBASIC-0.01□□□□□ -2.41
SLC28A2O43868 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.01□□□□□ -2.41
SLC28A2O43868 AC114755.3-201ENST00000481111 251 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms