Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORD45A-201ENST00000384512 84 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 RNA5SP225-201ENST00000410874 135 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 AC096531.1-201ENST00000419107 107 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 MIR3681-201ENST00000580089 72 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 MIR8068-201ENST00000618032 68 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 SNORD114-11-201ENST00000363738 75 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 MIR548C-201ENST00000384815 97 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 SNORD38.3-201ENST00000516599 73 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 AL353803.5-201ENST00000599815 141 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 MIR8053-201ENST00000613344 75 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 SNORD113.1-201ENST00000363280 73 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR519A2-201ENST00000384990 87 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 RNU6-857P-201ENST00000515893 110 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 RNU6-518P-201ENST00000516056 96 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR6854-201ENST00000614935 69 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 U7.4-201ENST00000614961 63 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 U2.7-201ENST00000619197 100 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR154-201ENST00000385243 84 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNU6-279P-201ENST00000391297 101 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 AC114755.3-201ENST00000481111 251 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNA5SP470-201ENST00000516463 106 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 AC093726.3-201ENST00000637588 150 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNU6-24P-201ENST00000384440 107 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNU6-587P-201ENST00000391282 106 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 MIR6851-201ENST00000617060 67 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 MIR409-201ENST00000362237 79 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 SNORD115-31-201ENST00000365318 82 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 SNORD75.1-201ENST00000408373 60 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 MTND4LP1-201ENST00000446263 157 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6-687P-201ENST00000516443 89 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 MIR889-201ENST00000401280 79 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 RNU4-63P-201ENST00000411313 118 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 AL021921.1-201ENST00000442774 93 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 MIR4464-201ENST00000580818 92 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 RNU6-668P-201ENST00000364180 107 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 SNORA62.4-201ENST00000365504 151 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU6-411P-201ENST00000384451 107 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR204-201ENST00000385200 110 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU7-154P-201ENST00000516194 62 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR548AZ-201ENST00000616567 95 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR6888-201ENST00000621977 67 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 RNU6-895P-201ENST00000384125 103 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR124-2-201ENST00000385081 109 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 SNORA72.7-201ENST00000516349 94 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR548AG1-201ENST00000579932 66 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR548V-201ENST00000584165 80 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD116-24-201ENST00000384549 92 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 MIR517B-201ENST00000385102 67 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 RNU7-174P-201ENST00000516248 59 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 AL445584.3-201ENST00000617173 78 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 MIR518B-201ENST00000385127 83 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 MIR196A2-201ENST00000385189 110 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 SNORD22.1-201ENST00000516331 125 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 RNU6-523P-201ENST00000516304 54 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 MIR630-201ENST00000384957 97 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 SNORA32.3-201ENST00000384772 121 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-721P-201ENST00000410155 105 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-284P-201ENST00000411105 106 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-634P-201ENST00000459134 106 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 SNORD18.2-201ENST00000459604 70 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNY1P9-201ENST00000532431 109 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 U4.4-201ENST00000620626 117 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNA5SP215-201ENST00000363440 122 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-698P-201ENST00000363523 107 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-34P-201ENST00000364874 107 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-540P-201ENST00000384622 101 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-776P-201ENST00000364403 104 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 SNORA3B-201ENST00000391305 131 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 AP000533.3-201ENST00000447704 118 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 367.4 ms