Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORD45A-201ENST00000384512 84 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 RNA5SP225-201ENST00000410874 135 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 AC096531.1-201ENST00000419107 107 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 MIR3681-201ENST00000580089 72 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 MIR8068-201ENST00000618032 68 ntBASIC-0.23□□□□□ -2.45
CDX4O14627 SNORD114-11-201ENST00000363738 75 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 MIR548C-201ENST00000384815 97 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 SNORD38.3-201ENST00000516599 73 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 AL353803.5-201ENST00000599815 141 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 MIR8053-201ENST00000613344 75 ntBASIC-0.24□□□□□ -2.45
CDX4O14627 SNORD113.1-201ENST00000363280 73 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR519A2-201ENST00000384990 87 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 RNU6-857P-201ENST00000515893 110 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 RNU6-518P-201ENST00000516056 96 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR6854-201ENST00000614935 69 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 U7.4-201ENST00000614961 63 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 U2.7-201ENST00000619197 100 ntBASIC-0.25□□□□□ -2.45
CDX4O14627 MIR154-201ENST00000385243 84 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNU6-279P-201ENST00000391297 101 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 AC114755.3-201ENST00000481111 251 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNA5SP470-201ENST00000516463 106 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 AC093726.3-201ENST00000637588 150 ntBASIC-0.26□□□□□ -2.45
CDX4O14627 RNU6-24P-201ENST00000384440 107 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNU6-587P-201ENST00000391282 106 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 MIR6851-201ENST00000617060 67 ntBASIC-0.27□□□□□ -2.45
CDX4O14627 MIR409-201ENST00000362237 79 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 SNORD115-31-201ENST00000365318 82 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 SNORD75.1-201ENST00000408373 60 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 MTND4LP1-201ENST00000446263 157 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6-687P-201ENST00000516443 89 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.28□□□□□ -2.45
CDX4O14627 MIR889-201ENST00000401280 79 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 RNU4-63P-201ENST00000411313 118 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 AL021921.1-201ENST00000442774 93 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 MIR4464-201ENST00000580818 92 ntBASIC-0.29□□□□□ -2.46
CDX4O14627 RNU6-668P-201ENST00000364180 107 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 SNORA62.4-201ENST00000365504 151 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU6-411P-201ENST00000384451 107 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR204-201ENST00000385200 110 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU7-154P-201ENST00000516194 62 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR548AZ-201ENST00000616567 95 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 MIR6888-201ENST00000621977 67 ntBASIC-0.3□□□□□ -2.46
CDX4O14627 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 RNU6-895P-201ENST00000384125 103 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR124-2-201ENST00000385081 109 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 SNORA72.7-201ENST00000516349 94 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR548AG1-201ENST00000579932 66 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 MIR548V-201ENST00000584165 80 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.31□□□□□ -2.46
CDX4O14627 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD116-24-201ENST00000384549 92 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 MIR517B-201ENST00000385102 67 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 RNU7-174P-201ENST00000516248 59 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 AL445584.3-201ENST00000617173 78 ntBASIC-0.32□□□□□ -2.46
CDX4O14627 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 MIR518B-201ENST00000385127 83 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 MIR196A2-201ENST00000385189 110 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 SNORD22.1-201ENST00000516331 125 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.33□□□□□ -2.46
CDX4O14627 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 RNU6-523P-201ENST00000516304 54 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.34□□□□□ -2.46
CDX4O14627 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 MIR630-201ENST00000384957 97 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.35□□□□□ -2.47
CDX4O14627 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 SNORA32.3-201ENST00000384772 121 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-721P-201ENST00000410155 105 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-284P-201ENST00000411105 106 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNU6-634P-201ENST00000459134 106 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 SNORD18.2-201ENST00000459604 70 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNY1P9-201ENST00000532431 109 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 U4.4-201ENST00000620626 117 ntBASIC-0.36□□□□□ -2.47
CDX4O14627 RNA5SP215-201ENST00000363440 122 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-698P-201ENST00000363523 107 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-34P-201ENST00000364874 107 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-540P-201ENST00000384622 101 ntBASIC-0.37□□□□□ -2.47
CDX4O14627 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.37□□□□□ -2.47
CDX4O14627 RNU6-776P-201ENST00000364403 104 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 SNORA3B-201ENST00000391305 131 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 AP000533.3-201ENST00000447704 118 ntBASIC-0.38□□□□□ -2.47
CDX4O14627 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms