Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR876-201ENST00000401147 81 ntBASIC0.65□□□□□ -2.31
RFXAPO00287 SNORA68.3-201ENST00000515906 83 ntBASIC0.65□□□□□ -2.31
RFXAPO00287 SNORD115-23-201ENST00000364461 82 ntBASIC0.64□□□□□ -2.31
RFXAPO00287 SNORD44.1-201ENST00000363202 61 ntBASIC0.63□□□□□ -2.31
RFXAPO00287 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
RFXAPO00287 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
RFXAPO00287 Y_RNA.698-201ENST00000516798 118 ntBASIC0.63□□□□□ -2.31
RFXAPO00287 SCARNA11.2-201ENST00000517183 154 ntBASIC0.63□□□□□ -2.31
RFXAPO00287 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
RFXAPO00287 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RFXAPO00287 MIR106A-201ENST00000384870 81 ntBASIC0.62□□□□□ -2.31
RFXAPO00287 SNORD2-201ENST00000459163 69 ntBASIC0.62□□□□□ -2.31
RFXAPO00287 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
RFXAPO00287 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
RFXAPO00287 RNU4-33P-201ENST00000364316 85 ntBASIC0.61□□□□□ -2.31
RFXAPO00287 RNA5SP470-201ENST00000516463 106 ntBASIC0.61□□□□□ -2.31
RFXAPO00287 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
RFXAPO00287 MIR4432-201ENST00000581823 84 ntBASIC0.61□□□□□ -2.31
RFXAPO00287 uc_338.36-201ENST00000622331 158 ntBASIC0.61□□□□□ -2.31
RFXAPO00287 MIR4464-201ENST00000580818 92 ntBASIC0.6□□□□□ -2.31
RFXAPO00287 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
RFXAPO00287 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.6□□□□□ -2.31
RFXAPO00287 RNU6-127P-201ENST00000390897 107 ntBASIC0.59□□□□□ -2.31
RFXAPO00287 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.59□□□□□ -2.31
RFXAPO00287 RNU6-924P-201ENST00000362926 108 ntBASIC0.58□□□□□ -2.32
RFXAPO00287 RNU6-815P-201ENST00000384080 113 ntBASIC0.58□□□□□ -2.32
RFXAPO00287 MIR548X-201ENST00000580069 75 ntBASIC0.58□□□□□ -2.32
RFXAPO00287 RNU7-151P-201ENST00000516930 53 ntBASIC0.57□□□□□ -2.32
RFXAPO00287 MIR6888-201ENST00000621977 67 ntBASIC0.57□□□□□ -2.32
RFXAPO00287 MIR643-201ENST00000385267 97 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 RNU7-88P-201ENST00000458752 63 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 RNU6-848P-201ENST00000515948 107 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 RNU6-617P-201ENST00000516147 107 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 RNU6-473P-201ENST00000516164 107 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 RNU6-1049P-201ENST00000516414 107 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 AC108676.2-201ENST00000605225 163 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.56□□□□□ -2.32
RFXAPO00287 MIR6086-201ENST00000638065 55 ntBASIC0.55□□□□□ -2.32
RFXAPO00287 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
RFXAPO00287 RNU6-1262P-201ENST00000516217 96 ntBASIC0.54□□□□□ -2.32
RFXAPO00287 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 RNU6-930P-201ENST00000390938 100 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 MIR548F3-201ENST00000408509 87 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 MIR548H2-201ENST00000408874 88 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 RNA5SP285-201ENST00000516619 119 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 U7.5-201ENST00000517224 61 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
RFXAPO00287 Y_RNA.69-201ENST00000362885 109 ntBASIC0.52□□□□□ -2.33
RFXAPO00287 RNU6-1267P-201ENST00000410747 107 ntBASIC0.52□□□□□ -2.33
RFXAPO00287 AC108740.1-201ENST00000498629 225 ntBASIC0.52□□□□□ -2.33
RFXAPO00287 MIR5704-201ENST00000584029 77 ntBASIC0.52□□□□□ -2.33
RFXAPO00287 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
RFXAPO00287 MIR429-201ENST00000362106 83 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 RNA5SP98-201ENST00000363158 137 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 AL445584.3-201ENST00000617173 78 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 MIR8068-201ENST00000618032 68 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 MIR6514-201ENST00000622549 70 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 snoR1.1-201ENST00000628177 80 ntBASIC0.51□□□□□ -2.33
RFXAPO00287 RNA5SP63-201ENST00000391225 112 ntBASIC0.5□□□□□ -2.33
RFXAPO00287 RNU6-419P-201ENST00000517030 63 ntBASIC0.5□□□□□ -2.33
RFXAPO00287 AL391099.1-201ENST00000624635 187 ntBASIC0.5□□□□□ -2.33
RFXAPO00287 RNU6-974P-201ENST00000384099 108 ntBASIC0.48□□□□□ -2.33
RFXAPO00287 RNU7-55P-201ENST00000459426 62 ntBASIC0.48□□□□□ -2.33
RFXAPO00287 MIR125B1-201ENST00000385236 88 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 RNU6-696P-201ENST00000390834 107 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 RNA5SP163-201ENST00000410304 99 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 RNU6-1206P-201ENST00000516339 103 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 RNU6-1174P-201ENST00000517278 101 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 MIR6507-201ENST00000613630 70 ntBASIC0.47□□□□□ -2.33
RFXAPO00287 RNU6-455P-201ENST00000384681 107 ntBASIC0.45□□□□□ -2.34
RFXAPO00287 SNORD57-201ENST00000448188 72 ntBASIC0.45□□□□□ -2.34
RFXAPO00287 AC069113.3-201ENST00000521019 150 ntBASIC0.45□□□□□ -2.34
RFXAPO00287 Y_RNA.139-201ENST00000363464 102 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 RNU6-973P-201ENST00000364690 107 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 MIR545-201ENST00000385085 106 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 RNU6-1133P-201ENST00000410963 100 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 AC023932.2-201ENST00000603176 175 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 MTRNR2L9-201ENST00000622562 75 ntBASIC0.44□□□□□ -2.34
RFXAPO00287 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
RFXAPO00287 MIR548AA1-201ENST00000384971 97 ntBASIC0.43□□□□□ -2.34
RFXAPO00287 AC096531.1-201ENST00000419107 107 ntBASIC0.43□□□□□ -2.34
RFXAPO00287 RNU7-160P-201ENST00000516660 62 ntBASIC0.43□□□□□ -2.34
RFXAPO00287 MIR6759-201ENST00000638110 65 ntBASIC0.43□□□□□ -2.34
RFXAPO00287 RNU6-838P-201ENST00000363399 108 ntBASIC0.42□□□□□ -2.34
RFXAPO00287 SNORD56B-201ENST00000384713 71 ntBASIC0.42□□□□□ -2.34
RFXAPO00287 MIR4636-201ENST00000582271 80 ntBASIC0.42□□□□□ -2.34
RFXAPO00287 RNU6-986P-201ENST00000363133 102 ntBASIC0.41□□□□□ -2.34
RFXAPO00287 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
RFXAPO00287 MIR6718-201ENST00000616153 80 ntBASIC0.41□□□□□ -2.34
RFXAPO00287 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
RFXAPO00287 RNU6-900P-201ENST00000384498 102 ntBASIC0.4□□□□□ -2.35
RFXAPO00287 MIR593-201ENST00000384856 100 ntBASIC0.4□□□□□ -2.35
RFXAPO00287 RNU6-995P-201ENST00000391244 107 ntBASIC0.4□□□□□ -2.35
RFXAPO00287 AC244250.2-201ENST00000418731 148 ntBASIC0.4□□□□□ -2.35
RFXAPO00287 RNU6-180P-201ENST00000516697 61 ntBASIC0.39□□□□□ -2.35
RFXAPO00287 CR383656.4-201ENST00000546909 122 ntBASIC0.39□□□□□ -2.35
RFXAPO00287 RNU6-828P-201ENST00000364876 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms