Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR519C-201ENST00000385053 87 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 AC108019.1-201ENST00000512540 175 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 RNU6-313P-201ENST00000516317 112 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 MIR3139-201ENST00000579145 76 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 AC091912.2-201ENST00000624798 167 ntBASIC-0.86□□□□□ -2.55
CCDC188H7C350 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 MIR1255B2-201ENST00000408618 67 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 AL031737.1-201ENST00000450125 223 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.87□□□□□ -2.55
CCDC188H7C350 CYP3A54P-201ENST00000566950 75 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR6818-201ENST00000621576 65 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR2052-201ENST00000636055 55 ntBASIC-0.88□□□□□ -2.55
CCDC188H7C350 MIR450A1-201ENST00000362262 91 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 MIR3910-1-201ENST00000580936 111 ntBASIC-0.89□□□□□ -2.55
CCDC188H7C350 RNU6-340P-201ENST00000364005 107 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR521-2-201ENST00000384818 87 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 SNORD77.2-201ENST00000391045 68 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR4464-201ENST00000580818 92 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 MIR664B-201ENST00000626756 61 ntBASIC-0.9□□□□□ -2.55
CCDC188H7C350 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 RNU6-681P-201ENST00000364012 104 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 MT-TM-201ENST00000387377 68 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
CCDC188H7C350 SNORD54-201ENST00000459159 67 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 RNU6-752P-201ENST00000516376 102 ntBASIC-0.91□□□□□ -2.56
CCDC188H7C350 SNORD115-37-201ENST00000363768 82 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 RNY4P7-201ENST00000364600 96 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR29B1-201ENST00000385015 81 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR4668-201ENST00000582284 70 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
CCDC188H7C350 MIR6888-201ENST00000621977 67 ntBASIC-0.92□□□□□ -2.56
CCDC188H7C350 RNA5SP26-201ENST00000362406 119 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-633P-201ENST00000362612 103 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-576P-201ENST00000390854 102 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNY4P18-201ENST00000391107 89 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.93□□□□□ -2.56
CCDC188H7C350 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 MIR6739-201ENST00000622461 75 ntBASIC-0.94□□□□□ -2.56
CCDC188H7C350 RNA5SP405-201ENST00000363059 114 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 MIR507-201ENST00000385234 94 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 SNORA40.13-201ENST00000516379 120 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.95□□□□□ -2.56
CCDC188H7C350 AP001318.4-201ENST00000616637 121 ntBASIC-0.95□□□□□ -2.56
CCDC188H7C350 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 AL035461.1-201ENST00000421490 332 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 AC093729.1-201ENST00000513074 128 ntBASIC-0.96□□□□□ -2.56
CCDC188H7C350 SNORD116-22-201ENST00000384430 92 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 RNY4-201ENST00000516507 96 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 MALAT1.1-201ENST00000618249 95 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.97□□□□□ -2.56
CCDC188H7C350 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.98□□□□□ -2.57
CCDC188H7C350 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.98□□□□□ -2.57
CCDC188H7C350 MIR519A2-201ENST00000384990 87 ntBASIC-0.99□□□□□ -2.57
CCDC188H7C350 RNU6-518P-201ENST00000516056 96 ntBASIC-0.99□□□□□ -2.57
CCDC188H7C350 RNU6-924P-201ENST00000362926 108 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 SNORD115-33-201ENST00000363723 82 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-164P-201ENST00000364604 103 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-402P-201ENST00000410678 103 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU4-61P-201ENST00000411243 107 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 AL606753.1-201ENST00000427435 87 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 SNORD63.1-201ENST00000516178 80 ntBASIC-1□□□□□ -2.57
CCDC188H7C350 RNU6-624P-201ENST00000363411 107 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU7-154P-201ENST00000516194 62 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU6-267P-201ENST00000516714 103 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.01□□□□□ -2.57
CCDC188H7C350 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.01□□□□□ -2.57
CCDC188H7C350 RNU6-194P-201ENST00000363862 105 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-219P-201ENST00000364728 107 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 SNORD113-1-201ENST00000365321 69 ntBASIC-1.02□□□□□ -2.57
CCDC188H7C350 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 RNU6-755P-201ENST00000364400 103 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 AL021921.1-201ENST00000442774 93 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 RNU6-656P-201ENST00000516785 107 ntBASIC-1.03□□□□□ -2.57
CCDC188H7C350 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
CCDC188H7C350 MIR548BB-201ENST00000626714 66 ntBASIC-1.04□□□□□ -2.58
CCDC188H7C350 SNORA63.4-201ENST00000362763 126 ntBASIC-1.05□□□□□ -2.58
CCDC188H7C350 RNU4-88P-201ENST00000411220 86 ntBASIC-1.05□□□□□ -2.58
CCDC188H7C350 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 SNORD115-22-201ENST00000364456 82 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 MIR488-201ENST00000365739 83 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-32P-201ENST00000383948 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-13P-201ENST00000384248 107 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms