Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU4-61P-201ENST00000411243 107 ntBASIC-0.81□□□□□ -2.54
NKX2-6A6NCS4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.81□□□□□ -2.54
NKX2-6A6NCS4 RNU6-789P-201ENST00000517105 102 ntBASIC-0.81□□□□□ -2.54
NKX2-6A6NCS4 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
NKX2-6A6NCS4 MIR365A-201ENST00000362260 87 ntBASIC-0.82□□□□□ -2.54
NKX2-6A6NCS4 RNU6-478P-201ENST00000363904 110 ntBASIC-0.82□□□□□ -2.54
NKX2-6A6NCS4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.82□□□□□ -2.54
NKX2-6A6NCS4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.82□□□□□ -2.54
NKX2-6A6NCS4 MIR548AG1-201ENST00000579932 66 ntBASIC-0.82□□□□□ -2.54
NKX2-6A6NCS4 SNORD64-201ENST00000386683 67 ntBASIC-0.83□□□□□ -2.54
NKX2-6A6NCS4 AL500527.2-201ENST00000454105 95 ntBASIC-0.83□□□□□ -2.54
NKX2-6A6NCS4 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
NKX2-6A6NCS4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.83□□□□□ -2.54
NKX2-6A6NCS4 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.84□□□□□ -2.54
NKX2-6A6NCS4 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.84□□□□□ -2.54
NKX2-6A6NCS4 MIR548C-201ENST00000384815 97 ntBASIC-0.84□□□□□ -2.54
NKX2-6A6NCS4 RNU6-406P-201ENST00000516470 107 ntBASIC-0.84□□□□□ -2.54
NKX2-6A6NCS4 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 RNU6-645P-201ENST00000364649 106 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 RNU6-49P-201ENST00000384256 107 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 MIR147A-201ENST00000385079 72 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 RNU6-844P-201ENST00000517175 102 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 MIR4484-201ENST00000582855 83 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 MIR3675-201ENST00000583661 73 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 U2.7-201ENST00000619197 100 ntBASIC-0.85□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 RNU6-686P-201ENST00000364839 107 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 RNU7-154P-201ENST00000516194 62 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 MIR4306-201ENST00000583390 91 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 U2.22-201ENST00000636441 106 ntBASIC-0.86□□□□□ -2.55
NKX2-6A6NCS4 RNU6-675P-201ENST00000384236 104 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 SNORA8.1-201ENST00000384250 140 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNU6-129P-201ENST00000391022 107 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 MIR1285-2-201ENST00000408311 88 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNA5SP89-201ENST00000410300 108 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNU6-168P-201ENST00000516189 101 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNU6-557P-201ENST00000516842 110 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 RNU6-303P-201ENST00000517091 106 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 MIR3115-201ENST00000577915 68 ntBASIC-0.87□□□□□ -2.55
NKX2-6A6NCS4 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 RNU6-924P-201ENST00000362926 108 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 RNU6-604P-201ENST00000390917 100 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 AL021921.1-201ENST00000442774 93 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 RNU6-982P-201ENST00000516216 102 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 MIR4441-201ENST00000582623 100 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 AC006160.2-201ENST00000637708 154 ntBASIC-0.88□□□□□ -2.55
NKX2-6A6NCS4 SNORD45.1-201ENST00000363181 77 ntBASIC-0.89□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.89□□□□□ -2.55
NKX2-6A6NCS4 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.9□□□□□ -2.55
NKX2-6A6NCS4 AC074348.1-201ENST00000426503 132 ntBASIC-0.9□□□□□ -2.55
NKX2-6A6NCS4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.9□□□□□ -2.55
NKX2-6A6NCS4 MIR548AI-201ENST00000579940 88 ntBASIC-0.9□□□□□ -2.55
NKX2-6A6NCS4 SCARNA18B-201ENST00000458806 135 ntBASIC-0.91□□□□□ -2.56
NKX2-6A6NCS4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.91□□□□□ -2.56
NKX2-6A6NCS4 IGLL4P-201ENST00000614590 133 ntBASIC-0.91□□□□□ -2.56
NKX2-6A6NCS4 MIR382-201ENST00000637119 76 ntBASIC-0.91□□□□□ -2.56
NKX2-6A6NCS4 RNY1P1-201ENST00000364372 112 ntBASIC-0.92□□□□□ -2.56
NKX2-6A6NCS4 RNY4P30-201ENST00000410216 95 ntBASIC-0.92□□□□□ -2.56
NKX2-6A6NCS4 SNORD115-22-201ENST00000364456 82 ntBASIC-0.93□□□□□ -2.56
NKX2-6A6NCS4 RNA5SP180-201ENST00000516181 101 ntBASIC-0.93□□□□□ -2.56
NKX2-6A6NCS4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.93□□□□□ -2.56
NKX2-6A6NCS4 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.94□□□□□ -2.56
NKX2-6A6NCS4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.94□□□□□ -2.56
NKX2-6A6NCS4 U7.5-201ENST00000517224 61 ntBASIC-0.94□□□□□ -2.56
NKX2-6A6NCS4 MIR664A-201ENST00000626086 82 ntBASIC-0.94□□□□□ -2.56
NKX2-6A6NCS4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.95□□□□□ -2.56
NKX2-6A6NCS4 RNU6-807P-201ENST00000516805 107 ntBASIC-0.95□□□□□ -2.56
NKX2-6A6NCS4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.95□□□□□ -2.56
NKX2-6A6NCS4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 RNU6-706P-201ENST00000517229 104 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 MIR5588-201ENST00000581890 63 ntBASIC-0.96□□□□□ -2.56
NKX2-6A6NCS4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
NKX2-6A6NCS4 RNU7-174P-201ENST00000516248 59 ntBASIC-0.97□□□□□ -2.56
NKX2-6A6NCS4 snoU83B.1-201ENST00000517136 88 ntBASIC-0.97□□□□□ -2.56
NKX2-6A6NCS4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.98□□□□□ -2.57
NKX2-6A6NCS4 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.98□□□□□ -2.57
NKX2-6A6NCS4 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.99□□□□□ -2.57
NKX2-6A6NCS4 RNU6-979P-201ENST00000383896 107 ntBASIC-0.99□□□□□ -2.57
NKX2-6A6NCS4 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.99□□□□□ -2.57
NKX2-6A6NCS4 MIR548V-201ENST00000584165 80 ntBASIC-0.99□□□□□ -2.57
NKX2-6A6NCS4 AC138207.3-201ENST00000585289 166 ntBASIC-0.99□□□□□ -2.57
NKX2-6A6NCS4 MIR494-201ENST00000349529 81 ntBASIC-1□□□□□ -2.57
NKX2-6A6NCS4 RNU6-153P-201ENST00000364422 104 ntBASIC-1□□□□□ -2.57
NKX2-6A6NCS4 RNU6-732P-201ENST00000516033 103 ntBASIC-1□□□□□ -2.57
NKX2-6A6NCS4 AP002795.1-201ENST00000534879 84 ntBASIC-1□□□□□ -2.57
NKX2-6A6NCS4 MIR1297-201ENST00000637311 77 ntBASIC-1□□□□□ -2.57
NKX2-6A6NCS4 RNY4P27-201ENST00000363341 96 ntBASIC-1.01□□□□□ -2.57
NKX2-6A6NCS4 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 353 ms