Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
PCDHA11Q9Y5I1 RNA5SP128-201ENST00000365305 116 ntBASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 MIR548V-201ENST00000584165 80 ntBASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 U6.96-201ENST00000636425 70 ntBASIC0.66□□□□□ -2.3
PCDHA11Q9Y5I1 SNORA25.5-201ENST00000363782 126 ntBASIC0.65□□□□□ -2.31
PCDHA11Q9Y5I1 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
PCDHA11Q9Y5I1 MIR517B-201ENST00000385102 67 ntBASIC0.65□□□□□ -2.31
PCDHA11Q9Y5I1 RNU7-174P-201ENST00000516248 59 ntBASIC0.65□□□□□ -2.31
PCDHA11Q9Y5I1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.65□□□□□ -2.31
PCDHA11Q9Y5I1 SNORD44.1-201ENST00000363202 61 ntBASIC0.64□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-698P-201ENST00000363523 107 ntBASIC0.64□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-34P-201ENST00000364874 107 ntBASIC0.64□□□□□ -2.31
PCDHA11Q9Y5I1 AC084368.1-201ENST00000620935 65 ntBASIC0.64□□□□□ -2.31
PCDHA11Q9Y5I1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
PCDHA11Q9Y5I1 SNORA49-201ENST00000386157 136 ntBASIC0.63□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-175P-201ENST00000516896 107 ntBASIC0.63□□□□□ -2.31
PCDHA11Q9Y5I1 CYP3A54P-201ENST00000566950 75 ntBASIC0.63□□□□□ -2.31
PCDHA11Q9Y5I1 MIR630-201ENST00000384957 97 ntBASIC0.62□□□□□ -2.31
PCDHA11Q9Y5I1 RNA5SP192-201ENST00000364404 120 ntBASIC0.61□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-92P-201ENST00000605893 104 ntBASIC0.61□□□□□ -2.31
PCDHA11Q9Y5I1 MIR2909-201ENST00000617113 69 ntBASIC0.61□□□□□ -2.31
PCDHA11Q9Y5I1 AC090617.8-201ENST00000623339 167 ntBASIC0.61□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-940P-201ENST00000363433 104 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 SNORD113-2-201ENST00000391082 72 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 MIR876-201ENST00000401147 81 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 RNU7-129P-201ENST00000516128 62 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 MIR3925-201ENST00000584674 77 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 U4.4-201ENST00000620626 117 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 MIR499B-201ENST00000636498 73 ntBASIC0.6□□□□□ -2.31
PCDHA11Q9Y5I1 RNU6-499P-201ENST00000365615 107 ntBASIC0.59□□□□□ -2.31
PCDHA11Q9Y5I1 AL021921.1-201ENST00000442774 93 ntBASIC0.58□□□□□ -2.32
PCDHA11Q9Y5I1 RNA5SP476-201ENST00000516613 103 ntBASIC0.58□□□□□ -2.32
PCDHA11Q9Y5I1 MIR6773-201ENST00000612812 74 ntBASIC0.58□□□□□ -2.32
PCDHA11Q9Y5I1 RN7SL660P-201ENST00000614852 299 ntBASIC0.58□□□□□ -2.32
PCDHA11Q9Y5I1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
PCDHA11Q9Y5I1 RNU6-337P-201ENST00000391243 106 ntBASIC0.57□□□□□ -2.32
PCDHA11Q9Y5I1 RNU6-122P-201ENST00000516818 107 ntBASIC0.57□□□□□ -2.32
PCDHA11Q9Y5I1 MIR103A1-201ENST00000362165 78 ntBASIC0.56□□□□□ -2.32
PCDHA11Q9Y5I1 MIRLET7D-201ENST00000362263 87 ntBASIC0.56□□□□□ -2.32
PCDHA11Q9Y5I1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.56□□□□□ -2.32
PCDHA11Q9Y5I1 SNORA75.1-201ENST00000391130 148 ntBASIC0.56□□□□□ -2.32
PCDHA11Q9Y5I1 MIR466-201ENST00000580653 84 ntBASIC0.56□□□□□ -2.32
PCDHA11Q9Y5I1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 SNORA9.1-201ENST00000362412 131 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 SNORD60.1-201ENST00000362451 73 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 MIR1255B2-201ENST00000408618 67 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 RNU6-518P-201ENST00000516056 96 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
PCDHA11Q9Y5I1 RNU6-35P-201ENST00000384530 107 ntBASIC0.54□□□□□ -2.32
PCDHA11Q9Y5I1 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
PCDHA11Q9Y5I1 MIR633-201ENST00000384821 98 ntBASIC0.53□□□□□ -2.32
PCDHA11Q9Y5I1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.53□□□□□ -2.32
PCDHA11Q9Y5I1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-502P-201ENST00000362419 108 ntBASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 SNORD115-25-201ENST00000362619 82 ntBASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 MIR106A-201ENST00000384870 81 ntBASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 MIRLET7B-201ENST00000385140 83 ntBASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 HAR1A.1-201ENST00000459583 118 ntBASIC0.52□□□□□ -2.33
PCDHA11Q9Y5I1 Y_RNA.325-201ENST00000365171 122 ntBASIC0.51□□□□□ -2.33
PCDHA11Q9Y5I1 MIR519A2-201ENST00000384990 87 ntBASIC0.51□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-127P-201ENST00000390897 107 ntBASIC0.51□□□□□ -2.33
PCDHA11Q9Y5I1 AC079150.2-201ENST00000443733 78 ntBASIC0.51□□□□□ -2.33
PCDHA11Q9Y5I1 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-815P-201ENST00000384080 113 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-1246P-201ENST00000391064 107 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 RNA5SP63-201ENST00000391225 112 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-782P-201ENST00000516852 104 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 MIR4514-201ENST00000581410 57 ntBASIC0.5□□□□□ -2.33
PCDHA11Q9Y5I1 RNU6-1079P-201ENST00000362861 110 ntBASIC0.49□□□□□ -2.33
PCDHA11Q9Y5I1 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
PCDHA11Q9Y5I1 RNU7-154P-201ENST00000516194 62 ntBASIC0.49□□□□□ -2.33
PCDHA11Q9Y5I1 RNA5SP470-201ENST00000516463 106 ntBASIC0.49□□□□□ -2.33
PCDHA11Q9Y5I1 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
PCDHA11Q9Y5I1 MTND4LP19-201ENST00000403051 166 ntBASIC0.48□□□□□ -2.33
PCDHA11Q9Y5I1 MIR3938-201ENST00000582157 103 ntBASIC0.48□□□□□ -2.33
PCDHA11Q9Y5I1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.47□□□□□ -2.33
PCDHA11Q9Y5I1 RNA5SP285-201ENST00000516619 119 ntBASIC0.47□□□□□ -2.33
PCDHA11Q9Y5I1 AC069113.3-201ENST00000521019 150 ntBASIC0.46□□□□□ -2.34
PCDHA11Q9Y5I1 RNA5SP98-201ENST00000363158 137 ntBASIC0.45□□□□□ -2.34
PCDHA11Q9Y5I1 RNU6-829P-201ENST00000363700 112 ntBASIC0.45□□□□□ -2.34
PCDHA11Q9Y5I1 SNORA41B-201ENST00000384785 128 ntBASIC0.45□□□□□ -2.34
PCDHA11Q9Y5I1 AC108740.1-201ENST00000498629 225 ntBASIC0.45□□□□□ -2.34
PCDHA11Q9Y5I1 AP000676.1-201ENST00000533307 52 ntBASIC0.45□□□□□ -2.34
PCDHA11Q9Y5I1 MIR6086-201ENST00000638065 55 ntBASIC0.44□□□□□ -2.34
PCDHA11Q9Y5I1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
PCDHA11Q9Y5I1 SNORD116-16-201ENST00000384533 92 ntBASIC0.42□□□□□ -2.34
PCDHA11Q9Y5I1 MIR643-201ENST00000385267 97 ntBASIC0.42□□□□□ -2.34
PCDHA11Q9Y5I1 SNORD115-23-201ENST00000364461 82 ntBASIC0.41□□□□□ -2.34
PCDHA11Q9Y5I1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.41□□□□□ -2.34
PCDHA11Q9Y5I1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.41□□□□□ -2.34
PCDHA11Q9Y5I1 MIR527-201ENST00000385244 85 ntBASIC0.4□□□□□ -2.35
PCDHA11Q9Y5I1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms