Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 MIR519C-201ENST00000385053 87 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 RNU2-51P-201ENST00000410708 197 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 AL450471.1-201ENST00000447509 127 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
PCDHGA1Q9Y5H4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.95□□□□□ -2.56
PCDHGA1Q9Y5H4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.96□□□□□ -2.56
PCDHGA1Q9Y5H4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
PCDHGA1Q9Y5H4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.96□□□□□ -2.56
PCDHGA1Q9Y5H4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 RNY4P18-201ENST00000391107 89 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 RNU6-752P-201ENST00000516376 102 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 MIR4723-201ENST00000585070 81 ntBASIC-0.97□□□□□ -2.56
PCDHGA1Q9Y5H4 MIR450A1-201ENST00000362262 91 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-208P-201ENST00000362431 107 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.98□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.99□□□□□ -2.57
PCDHGA1Q9Y5H4 AC022137.1-201ENST00000483735 151 ntBASIC-0.99□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR378F-201ENST00000578143 78 ntBASIC-0.99□□□□□ -2.57
PCDHGA1Q9Y5H4 AP001318.4-201ENST00000616637 121 ntBASIC-0.99□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-340P-201ENST00000364005 107 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-681P-201ENST00000364012 104 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR521-2-201ENST00000384818 87 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 SNORD77.2-201ENST00000391045 68 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 AP000533.3-201ENST00000447704 118 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 CYP3A54P-201ENST00000566950 75 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR4668-201ENST00000582284 70 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 AL353803.5-201ENST00000599815 141 ntBASIC-1□□□□□ -2.57
PCDHGA1Q9Y5H4 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.01□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.01□□□□□ -2.57
PCDHGA1Q9Y5H4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 SNORD115-37-201ENST00000363768 82 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR517B-201ENST00000385102 67 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 SNORA40.13-201ENST00000516379 120 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 MIR6739-201ENST00000622461 75 ntBASIC-1.02□□□□□ -2.57
PCDHGA1Q9Y5H4 RNU6-755P-201ENST00000364400 103 ntBASIC-1.03□□□□□ -2.57
PCDHGA1Q9Y5H4 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.03□□□□□ -2.57
PCDHGA1Q9Y5H4 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.03□□□□□ -2.57
PCDHGA1Q9Y5H4 AL500527.2-201ENST00000454105 95 ntBASIC-1.03□□□□□ -2.57
PCDHGA1Q9Y5H4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
PCDHGA1Q9Y5H4 SNORD18.2-201ENST00000459604 70 ntBASIC-1.04□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR3165-201ENST00000579874 75 ntBASIC-1.04□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR4464-201ENST00000580818 92 ntBASIC-1.04□□□□□ -2.58
PCDHGA1Q9Y5H4 SNORD114-25-201ENST00000363742 72 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 SNORD116-22-201ENST00000384430 92 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR124-2-201ENST00000385081 109 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 AL606753.1-201ENST00000427435 87 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR4499-201ENST00000584834 69 ntBASIC-1.05□□□□□ -2.58
PCDHGA1Q9Y5H4 RNU6-624P-201ENST00000363411 107 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR601-201ENST00000385256 79 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 AL603908.1-201ENST00000406098 201 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 AC093729.1-201ENST00000513074 128 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 MALAT1.1-201ENST00000618249 95 ntBASIC-1.06□□□□□ -2.58
PCDHGA1Q9Y5H4 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.08□□□□□ -2.58
PCDHGA1Q9Y5H4 AL445584.3-201ENST00000617173 78 ntBASIC-1.08□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR6888-201ENST00000621977 67 ntBASIC-1.08□□□□□ -2.58
PCDHGA1Q9Y5H4 MIR198-201ENST00000637333 62 ntBASIC-1.08□□□□□ -2.58
PCDHGA1Q9Y5H4 AL035461.1-201ENST00000421490 332 ntBASIC-1.09□□□□□ -2.58
PCDHGA1Q9Y5H4 uc_338.19-201ENST00000616808 99 ntBASIC-1.09□□□□□ -2.58
PCDHGA1Q9Y5H4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.1□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-219P-201ENST00000364728 107 ntBASIC-1.1□□□□□ -2.59
PCDHGA1Q9Y5H4 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.1□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-497P-201ENST00000365316 104 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 AC140658.3-201ENST00000567603 271 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 MIR4306-201ENST00000583390 91 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.11□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
PCDHGA1Q9Y5H4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.12□□□□□ -2.59
PCDHGA1Q9Y5H4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.12□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.12□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-789P-201ENST00000517105 102 ntBASIC-1.12□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-32P-201ENST00000383948 107 ntBASIC-1.13□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-13P-201ENST00000384248 107 ntBASIC-1.13□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-12P-201ENST00000384604 107 ntBASIC-1.13□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-41P-201ENST00000384741 107 ntBASIC-1.13□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-402P-201ENST00000410678 103 ntBASIC-1.13□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-215P-201ENST00000365169 102 ntBASIC-1.14□□□□□ -2.59
PCDHGA1Q9Y5H4 MIR519A2-201ENST00000384990 87 ntBASIC-1.14□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-557P-201ENST00000516842 110 ntBASIC-1.14□□□□□ -2.59
PCDHGA1Q9Y5H4 U4.2-201ENST00000618561 85 ntBASIC-1.14□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-924P-201ENST00000362926 108 ntBASIC-1.15□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-267P-201ENST00000516714 103 ntBASIC-1.15□□□□□ -2.59
PCDHGA1Q9Y5H4 MIR548BB-201ENST00000626714 66 ntBASIC-1.15□□□□□ -2.59
PCDHGA1Q9Y5H4 RNU6-640P-201ENST00000363693 105 ntBASIC-1.16□□□□□ -2.6
PCDHGA1Q9Y5H4 RNU6-147P-201ENST00000383983 107 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms