Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SNORA26.4-201ENST00000391188 123 ntBASIC-1.19□□□□□ -2.6
SHROOM4Q9ULL8 AC138207.3-201ENST00000585289 166 ntBASIC-1.19□□□□□ -2.6
SHROOM4Q9ULL8 MIR6129-201ENST00000616087 109 ntBASIC-1.19□□□□□ -2.6
SHROOM4Q9ULL8 AC091912.2-201ENST00000624798 167 ntBASIC-1.19□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-924P-201ENST00000362926 108 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 SNORD115-33-201ENST00000363723 82 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-576P-201ENST00000390854 102 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 MIR1302-5-201ENST00000408164 150 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 MIR1255B2-201ENST00000408618 67 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 CYP3A54P-201ENST00000566950 75 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 MIR4520-1-201ENST00000582609 70 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 MIR6874-201ENST00000635894 71 ntBASIC-1.2□□□□□ -2.6
SHROOM4Q9ULL8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.21□□□□□ -2.6
SHROOM4Q9ULL8 AC008267.6-201ENST00000441664 139 ntBASIC-1.21□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 MIR29B1-201ENST00000385015 81 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-887P-201ENST00000410660 100 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 AC026421.1-201ENST00000519101 163 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
SHROOM4Q9ULL8 AP002795.1-201ENST00000534879 84 ntBASIC-1.23□□□□□ -2.61
SHROOM4Q9ULL8 MIR4770-201ENST00000579149 58 ntBASIC-1.23□□□□□ -2.61
SHROOM4Q9ULL8 MIR507-201ENST00000385234 94 ntBASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 RNU6-904P-201ENST00000516206 101 ntBASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 RNA5SP147-201ENST00000516493 109 ntBASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 MIR203A-201ENST00000384836 110 ntBASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.24□□□□□ -2.61
SHROOM4Q9ULL8 SNORA2.1-201ENST00000363089 137 ntBASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 RNU6-226P-201ENST00000363778 107 ntBASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 SNORA33.1-201ENST00000364957 130 ntBASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 RNU6-260P-201ENST00000384092 107 ntBASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 MIR1246-201ENST00000636535 73 ntBASIC-1.25□□□□□ -2.61
SHROOM4Q9ULL8 SNORA18.5-201ENST00000516616 101 ntBASIC-1.26□□□□□ -2.61
SHROOM4Q9ULL8 RNU6-164P-201ENST00000364604 103 ntBASIC-1.27□□□□□ -2.61
SHROOM4Q9ULL8 SNORA24B-201ENST00000384176 131 ntBASIC-1.28□□□□□ -2.61
SHROOM4Q9ULL8 MIR519A2-201ENST00000384990 87 ntBASIC-1.28□□□□□ -2.61
SHROOM4Q9ULL8 SNORD19-201ENST00000391191 68 ntBASIC-1.28□□□□□ -2.61
SHROOM4Q9ULL8 snoU13.17-201ENST00000458802 104 ntBASIC-1.28□□□□□ -2.61
SHROOM4Q9ULL8 RPL35AP4-201ENST00000412007 102 ntBASIC-1.29□□□□□ -2.62
SHROOM4Q9ULL8 RNU7-24P-201ENST00000458867 62 ntBASIC-1.29□□□□□ -2.62
SHROOM4Q9ULL8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.29□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-119P-201ENST00000364882 107 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-81P-201ENST00000365608 104 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
SHROOM4Q9ULL8 SNORD90-201ENST00000391145 111 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 SNORD75.2-201ENST00000408784 58 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 AC090616.4-201ENST00000448026 115 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-382P-201ENST00000365181 106 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 SNORA19.1-201ENST00000410656 129 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 RNU7-88P-201ENST00000458752 63 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 U7.5-201ENST00000517224 61 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.31□□□□□ -2.62
SHROOM4Q9ULL8 MIR548M-201ENST00000408260 86 ntBASIC-1.32□□□□□ -2.62
SHROOM4Q9ULL8 MIR6509-201ENST00000614603 85 ntBASIC-1.32□□□□□ -2.62
SHROOM4Q9ULL8 SNORD116-10-201ENST00000363791 102 ntBASIC-1.33□□□□□ -2.62
SHROOM4Q9ULL8 RNA5SP292-201ENST00000390974 118 ntBASIC-1.33□□□□□ -2.62
SHROOM4Q9ULL8 MIR548AG1-201ENST00000579932 66 ntBASIC-1.33□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 MIR548H1-201ENST00000408610 102 ntBASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 MIR5683-201ENST00000636514 76 ntBASIC-1.34□□□□□ -2.62
SHROOM4Q9ULL8 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.35□□□□□ -2.63
SHROOM4Q9ULL8 MIR4490-201ENST00000582647 84 ntBASIC-1.35□□□□□ -2.63
SHROOM4Q9ULL8 MIR3657-201ENST00000584818 117 ntBASIC-1.35□□□□□ -2.63
SHROOM4Q9ULL8 AC006254.2-201ENST00000603259 279 ntBASIC-1.35□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-168P-201ENST00000516189 101 ntBASIC-1.36□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-824P-201ENST00000363724 104 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 MIR4773-1-201ENST00000637203 78 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 MIR521-2-201ENST00000384818 87 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 RNA5SP86-201ENST00000390869 98 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-732P-201ENST00000516033 103 ntBASIC-1.37□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.38□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.38□□□□□ -2.63
SHROOM4Q9ULL8 AL691482.2-201ENST00000457453 84 ntBASIC-1.38□□□□□ -2.63
SHROOM4Q9ULL8 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.39□□□□□ -2.63
SHROOM4Q9ULL8 RNU7-154P-201ENST00000516194 62 ntBASIC-1.39□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-540P-201ENST00000384622 101 ntBASIC-1.4□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-246P-201ENST00000384702 107 ntBASIC-1.4□□□□□ -2.63
SHROOM4Q9ULL8 MIR590-201ENST00000385008 97 ntBASIC-1.4□□□□□ -2.63
SHROOM4Q9ULL8 RNU6-518P-201ENST00000516056 96 ntBASIC-1.4□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.41□□□□□ -2.63
SHROOM4Q9ULL8 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.41□□□□□ -2.63
SHROOM4Q9ULL8 MIR548Q-201ENST00000408404 100 ntBASIC-1.41□□□□□ -2.63
SHROOM4Q9ULL8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
SHROOM4Q9ULL8 AC018880.2-201ENST00000414265 201 ntBASIC-1.42□□□□□ -2.64
SHROOM4Q9ULL8 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms