Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6-394P-201ENST00000410735 107 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 AL035461.1-201ENST00000421490 332 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 AC044792.1-201ENST00000593294 196 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 U6.58-201ENST00000613107 107 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.74□□□□□ -2.69
CISHQ9NSE2 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.74□□□□□ -2.69
CISHQ9NSE2 RNU6-696P-201ENST00000390834 107 ntBASIC-1.74□□□□□ -2.69
CISHQ9NSE2 RNU6-887P-201ENST00000410660 100 ntBASIC-1.74□□□□□ -2.69
CISHQ9NSE2 AL450471.1-201ENST00000447509 127 ntBASIC-1.74□□□□□ -2.69
CISHQ9NSE2 AL157777.2-201ENST00000258070 137 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 RNU6-630P-201ENST00000391258 106 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 MIR1236-201ENST00000408340 102 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 MTCYBP9-201ENST00000431021 303 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 RNU7-153P-201ENST00000516455 62 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 MIR3144-201ENST00000579460 79 ntBASIC-1.75□□□□□ -2.69
CISHQ9NSE2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 RNU6-645P-201ENST00000364649 106 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 RNU7-174P-201ENST00000516248 59 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 AC008737.2-201ENST00000599446 118 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.76□□□□□ -2.69
CISHQ9NSE2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.77□□□□□ -2.69
CISHQ9NSE2 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.77□□□□□ -2.69
CISHQ9NSE2 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.77□□□□□ -2.69
CISHQ9NSE2 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.77□□□□□ -2.69
CISHQ9NSE2 RNY4P27-201ENST00000363341 96 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 SNORD116-10-201ENST00000363791 102 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 RNU6-681P-201ENST00000364012 104 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 MIR548A3-201ENST00000385297 97 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 SCARNA23-201ENST00000516060 130 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 RNU6-537P-201ENST00000517277 103 ntBASIC-1.78□□□□□ -2.69
CISHQ9NSE2 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.79□□□□□ -2.7
CISHQ9NSE2 SNORD114-3-201ENST00000364969 75 ntBASIC-1.79□□□□□ -2.7
CISHQ9NSE2 MIR606-201ENST00000384851 96 ntBASIC-1.79□□□□□ -2.7
CISHQ9NSE2 RNU6-904P-201ENST00000516206 101 ntBASIC-1.79□□□□□ -2.7
CISHQ9NSE2 RNU6-598P-201ENST00000364017 105 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 RNU6-804P-201ENST00000384286 107 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 MTND4LP9-201ENST00000427694 174 ntBASIC-1.8□□□□□ -2.7
CISHQ9NSE2 RNU6-228P-201ENST00000362700 106 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 RNU7-107P-201ENST00000459121 61 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 AC108019.1-201ENST00000512540 175 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 RNU6-426P-201ENST00000516464 97 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 MIR23C-201ENST00000579846 100 ntBASIC-1.81□□□□□ -2.7
CISHQ9NSE2 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 RNU6-574P-201ENST00000384265 107 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 RNU6-880P-201ENST00000384526 107 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 RNU6-738P-201ENST00000384531 106 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 MIR548C-201ENST00000384815 97 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 SNORD77.2-201ENST00000391045 68 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 MIR3914-2-201ENST00000637339 95 ntBASIC-1.82□□□□□ -2.7
CISHQ9NSE2 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.83□□□□□ -2.7
CISHQ9NSE2 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.83□□□□□ -2.7
CISHQ9NSE2 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.83□□□□□ -2.7
CISHQ9NSE2 MIR1302-3-201ENST00000408128 138 ntBASIC-1.83□□□□□ -2.7
CISHQ9NSE2 SNORD33.1-201ENST00000516213 88 ntBASIC-1.83□□□□□ -2.7
CISHQ9NSE2 RNU6-563P-201ENST00000364872 108 ntBASIC-1.84□□□□□ -2.7
CISHQ9NSE2 AC120024.2-201ENST00000576526 175 ntBASIC-1.84□□□□□ -2.7
CISHQ9NSE2 MIR3123-201ENST00000583417 75 ntBASIC-1.84□□□□□ -2.7
CISHQ9NSE2 AL627230.5-201ENST00000619807 58 ntBASIC-1.84□□□□□ -2.7
CISHQ9NSE2 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.85□□□□□ -2.71
CISHQ9NSE2 RNU7-61P-201ENST00000515897 61 ntBASIC-1.85□□□□□ -2.71
CISHQ9NSE2 U4.4-201ENST00000620626 117 ntBASIC-1.85□□□□□ -2.71
CISHQ9NSE2 U2.18-201ENST00000622185 84 ntBASIC-1.85□□□□□ -2.71
CISHQ9NSE2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.86□□□□□ -2.71
CISHQ9NSE2 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.86□□□□□ -2.71
CISHQ9NSE2 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.86□□□□□ -2.71
CISHQ9NSE2 MIR429-201ENST00000362106 83 ntBASIC-1.87□□□□□ -2.71
CISHQ9NSE2 RNU6-200P-201ENST00000364743 107 ntBASIC-1.87□□□□□ -2.71
CISHQ9NSE2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
CISHQ9NSE2 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.87□□□□□ -2.71
CISHQ9NSE2 MTND5P41-201ENST00000517498 206 ntBASIC-1.87□□□□□ -2.71
CISHQ9NSE2 MIR4756-201ENST00000577874 78 ntBASIC-1.87□□□□□ -2.71
CISHQ9NSE2 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.88□□□□□ -2.71
CISHQ9NSE2 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.88□□□□□ -2.71
CISHQ9NSE2 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.88□□□□□ -2.71
CISHQ9NSE2 MIR3170-201ENST00000582699 77 ntBASIC-1.88□□□□□ -2.71
CISHQ9NSE2 MIR548AM-201ENST00000584298 74 ntBASIC-1.88□□□□□ -2.71
CISHQ9NSE2 RNU6-330P-201ENST00000363015 107 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 AC004792.1-201ENST00000614523 137 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 MIR664B-201ENST00000626756 61 ntBASIC-1.89□□□□□ -2.71
CISHQ9NSE2 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 MIR519C-201ENST00000385053 87 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 RNU6-258P-201ENST00000390884 101 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 RNU6-257P-201ENST00000410238 98 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms