Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SNORD114-17-201ENST00000364699 75 ntBASIC-0.62□□□□□ -2.51
Q9N2K0 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.62□□□□□ -2.51
Q9N2K0 AL500527.2-201ENST00000454105 95 ntBASIC-0.62□□□□□ -2.51
Q9N2K0 MIR548AI-201ENST00000579940 88 ntBASIC-0.62□□□□□ -2.51
Q9N2K0 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
Q9N2K0 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 RNA5SP331-201ENST00000364986 107 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 MIR196A1-201ENST00000388006 70 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 SNORA13-201ENST00000458790 133 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 CYP3A54P-201ENST00000566950 75 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 U6.81-201ENST00000612550 106 ntBASIC-0.63□□□□□ -2.51
Q9N2K0 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNU6-32P-201ENST00000383948 107 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNU6-13P-201ENST00000384248 107 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNU6-12P-201ENST00000384604 107 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNU6-41P-201ENST00000384741 107 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 SNORD64-201ENST00000386683 67 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNA5SP266-201ENST00000410273 108 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 AL450471.1-201ENST00000447509 127 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 RNU6-919P-201ENST00000516731 104 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 YWHAEP3-201ENST00000582767 121 ntBASIC-0.64□□□□□ -2.51
Q9N2K0 SNORD115-37-201ENST00000363768 82 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 RNU6-215P-201ENST00000365169 102 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 RNU6-431P-201ENST00000383874 107 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 MIR548AG1-201ENST00000579932 66 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 AL445584.3-201ENST00000617173 78 ntBASIC-0.65□□□□□ -2.51
Q9N2K0 RNU6-633P-201ENST00000362612 103 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 SNORA2.1-201ENST00000363089 137 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 RNU6-752P-201ENST00000516376 102 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 MIR4668-201ENST00000582284 70 ntBASIC-0.66□□□□□ -2.52
Q9N2K0 RNU6-681P-201ENST00000364012 104 ntBASIC-0.67□□□□□ -2.52
Q9N2K0 SNORD116-22-201ENST00000384430 92 ntBASIC-0.67□□□□□ -2.52
Q9N2K0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
Q9N2K0 RNU6-267P-201ENST00000516714 103 ntBASIC-0.67□□□□□ -2.52
Q9N2K0 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.67□□□□□ -2.52
Q9N2K0 MALAT1.1-201ENST00000618249 95 ntBASIC-0.67□□□□□ -2.52
Q9N2K0 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.68□□□□□ -2.52
Q9N2K0 RNU6-330P-201ENST00000363015 107 ntBASIC-0.69□□□□□ -2.52
Q9N2K0 RNU6-340P-201ENST00000364005 107 ntBASIC-0.69□□□□□ -2.52
Q9N2K0 MIR519A2-201ENST00000384990 87 ntBASIC-0.69□□□□□ -2.52
Q9N2K0 SNORD74.6-201ENST00000364796 70 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 SNORD20-201ENST00000384550 80 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 AL035461.1-201ENST00000421490 332 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 RNU6-518P-201ENST00000516056 96 ntBASIC-0.7□□□□□ -2.52
Q9N2K0 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.71□□□□□ -2.52
Q9N2K0 SNORA62.4-201ENST00000365504 151 ntBASIC-0.71□□□□□ -2.52
Q9N2K0 MIR521-2-201ENST00000384818 87 ntBASIC-0.71□□□□□ -2.52
Q9N2K0 RNU6-402P-201ENST00000410678 103 ntBASIC-0.71□□□□□ -2.52
Q9N2K0 RNY1P9-201ENST00000532431 109 ntBASIC-0.71□□□□□ -2.52
Q9N2K0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Q9N2K0 SNORA63.4-201ENST00000362763 126 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 RNY1P7-201ENST00000384743 110 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 MIR548C-201ENST00000384815 97 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 RNU7-88P-201ENST00000458752 63 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 uc_338.19-201ENST00000616808 99 ntBASIC-0.72□□□□□ -2.52
Q9N2K0 MIR488-201ENST00000365739 83 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 RNU6-147P-201ENST00000383983 107 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 AC093729.1-201ENST00000513074 128 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 RNU6-656P-201ENST00000516785 107 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 AC140658.3-201ENST00000567603 271 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
Q9N2K0 MIR382-201ENST00000637119 76 ntBASIC-0.73□□□□□ -2.53
Q9N2K0 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 SNORD63.1-201ENST00000516178 80 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 MIR4499-201ENST00000584834 69 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 MIR6739-201ENST00000622461 75 ntBASIC-0.74□□□□□ -2.53
Q9N2K0 SNORD115-22-201ENST00000364456 82 ntBASIC-0.75□□□□□ -2.53
Q9N2K0 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
Q9N2K0 U2.22-201ENST00000636441 106 ntBASIC-0.75□□□□□ -2.53
Q9N2K0 RNU6-219P-201ENST00000364728 107 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 SNORD57-201ENST00000448188 72 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 RNA5SP470-201ENST00000516463 106 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 MIR4484-201ENST00000582855 83 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
Q9N2K0 RNU6-624P-201ENST00000363411 107 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 RNU6-645P-201ENST00000364649 106 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 RNU6-982P-201ENST00000516216 102 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 U2.7-201ENST00000619197 100 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 MIR548BB-201ENST00000626714 66 ntBASIC-0.77□□□□□ -2.53
Q9N2K0 RNU6-640P-201ENST00000363693 105 ntBASIC-0.78□□□□□ -2.53
Q9N2K0 RNU6-478P-201ENST00000363904 110 ntBASIC-0.78□□□□□ -2.53
Q9N2K0 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms