Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.84□□□□□ -2.54
HDHD3Q9BSH5 AP001318.4-201ENST00000616637 121 ntBASIC-0.84□□□□□ -2.54
HDHD3Q9BSH5 MIR450A1-201ENST00000362262 91 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 RNU6-755P-201ENST00000364400 103 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 SNORD114-15-201ENST00000364687 72 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 MIR4668-201ENST00000582284 70 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 MIR2052-201ENST00000636055 55 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 MIR6086-201ENST00000638065 55 ntBASIC-0.85□□□□□ -2.55
HDHD3Q9BSH5 RNU6-219P-201ENST00000364728 107 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 MIR124-2-201ENST00000385081 109 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 SNORD77.2-201ENST00000391045 68 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 RNU2-51P-201ENST00000410708 197 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 AL031737.1-201ENST00000450125 223 ntBASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.86□□□□□ -2.55
HDHD3Q9BSH5 MIR147A-201ENST00000385079 72 ntBASIC-0.87□□□□□ -2.55
HDHD3Q9BSH5 snoU13.19-201ENST00000459148 104 ntBASIC-0.87□□□□□ -2.55
HDHD3Q9BSH5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.88□□□□□ -2.55
HDHD3Q9BSH5 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 RNY1P7-201ENST00000384743 110 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 AL035461.1-201ENST00000421490 332 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 SNORD18.2-201ENST00000459604 70 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 AC140658.3-201ENST00000567603 271 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 MALAT1.1-201ENST00000618249 95 ntBASIC-0.89□□□□□ -2.55
HDHD3Q9BSH5 MIR519A2-201ENST00000384990 87 ntBASIC-0.9□□□□□ -2.55
HDHD3Q9BSH5 RNU7-154P-201ENST00000516194 62 ntBASIC-0.9□□□□□ -2.55
HDHD3Q9BSH5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.9□□□□□ -2.55
HDHD3Q9BSH5 RNU6-681P-201ENST00000364012 104 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 AC093729.1-201ENST00000513074 128 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 RNU6-656P-201ENST00000516785 107 ntBASIC-0.91□□□□□ -2.56
HDHD3Q9BSH5 RNU6-640P-201ENST00000363693 105 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 SNORD64-201ENST00000386683 67 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 AL500527.2-201ENST00000454105 95 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 SNORA40.13-201ENST00000516379 120 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 MIR548AX-201ENST00000580117 73 ntBASIC-0.92□□□□□ -2.56
HDHD3Q9BSH5 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 MIR488-201ENST00000365739 83 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 RNU6-267P-201ENST00000516714 103 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 RNU6-557P-201ENST00000516842 110 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.93□□□□□ -2.56
HDHD3Q9BSH5 SNORD114-17-201ENST00000364699 75 ntBASIC-0.94□□□□□ -2.56
HDHD3Q9BSH5 SNORD116-22-201ENST00000384430 92 ntBASIC-0.94□□□□□ -2.56
HDHD3Q9BSH5 SCARNA17-201ENST00000516183 144 ntBASIC-0.94□□□□□ -2.56
HDHD3Q9BSH5 RNA5SP67-201ENST00000516422 131 ntBASIC-0.94□□□□□ -2.56
HDHD3Q9BSH5 MIR196A1-201ENST00000388006 70 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 RNU6-402P-201ENST00000410678 103 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 MIR548AG1-201ENST00000579932 66 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 MIR548BB-201ENST00000626714 66 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 MIR382-201ENST00000637119 76 ntBASIC-0.95□□□□□ -2.56
HDHD3Q9BSH5 SNORD115-37-201ENST00000363768 82 ntBASIC-0.96□□□□□ -2.56
HDHD3Q9BSH5 RNU6-215P-201ENST00000365169 102 ntBASIC-0.96□□□□□ -2.56
HDHD3Q9BSH5 U2.7-201ENST00000619197 100 ntBASIC-0.96□□□□□ -2.56
HDHD3Q9BSH5 RNU6-330P-201ENST00000363015 107 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 RNU6-147P-201ENST00000383983 107 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 RNU6-675P-201ENST00000384236 104 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 AC074348.1-201ENST00000426503 132 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 RNU6-518P-201ENST00000516056 96 ntBASIC-0.97□□□□□ -2.56
HDHD3Q9BSH5 RNU6-924P-201ENST00000362926 108 ntBASIC-0.98□□□□□ -2.57
HDHD3Q9BSH5 RNU6-478P-201ENST00000363904 110 ntBASIC-0.98□□□□□ -2.57
HDHD3Q9BSH5 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.98□□□□□ -2.57
HDHD3Q9BSH5 AL021921.1-201ENST00000442774 93 ntBASIC-0.98□□□□□ -2.57
HDHD3Q9BSH5 SNORA63.4-201ENST00000362763 126 ntBASIC-0.99□□□□□ -2.57
HDHD3Q9BSH5 AL603908.1-201ENST00000406098 201 ntBASIC-0.99□□□□□ -2.57
HDHD3Q9BSH5 AL606753.1-201ENST00000427435 87 ntBASIC-0.99□□□□□ -2.57
HDHD3Q9BSH5 RNU6-303P-201ENST00000517091 106 ntBASIC-0.99□□□□□ -2.57
HDHD3Q9BSH5 MIRLET7A1-201ENST00000362295 80 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 RNU6-645P-201ENST00000364649 106 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 RNU6-32P-201ENST00000383948 107 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 RNU6-13P-201ENST00000384248 107 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 RNU6-12P-201ENST00000384604 107 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 RNU6-41P-201ENST00000384741 107 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 Y_RNA.613-201ENST00000410726 97 ntBASIC-1□□□□□ -2.57
HDHD3Q9BSH5 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.01□□□□□ -2.57
HDHD3Q9BSH5 RNU6-686P-201ENST00000364839 107 ntBASIC-1.01□□□□□ -2.57
HDHD3Q9BSH5 SNORD20-201ENST00000384550 80 ntBASIC-1.01□□□□□ -2.57
HDHD3Q9BSH5 SCARNA18B-201ENST00000458806 135 ntBASIC-1.01□□□□□ -2.57
HDHD3Q9BSH5 MIR6738-201ENST00000619620 64 ntBASIC-1.01□□□□□ -2.57
HDHD3Q9BSH5 RNU6-246P-201ENST00000384702 107 ntBASIC-1.02□□□□□ -2.57
HDHD3Q9BSH5 SNORA26.4-201ENST00000391188 123 ntBASIC-1.02□□□□□ -2.57
HDHD3Q9BSH5 SNORD63.1-201ENST00000516178 80 ntBASIC-1.02□□□□□ -2.57
HDHD3Q9BSH5 RNU6-406P-201ENST00000516470 107 ntBASIC-1.02□□□□□ -2.57
HDHD3Q9BSH5 MIR3675-201ENST00000583661 73 ntBASIC-1.02□□□□□ -2.57
HDHD3Q9BSH5 SNORD115-33-201ENST00000363723 82 ntBASIC-1.03□□□□□ -2.57
HDHD3Q9BSH5 SNORD115-22-201ENST00000364456 82 ntBASIC-1.03□□□□□ -2.57
HDHD3Q9BSH5 RNU6-919P-201ENST00000516731 104 ntBASIC-1.03□□□□□ -2.57
HDHD3Q9BSH5 RNU6-807P-201ENST00000516805 107 ntBASIC-1.03□□□□□ -2.57
HDHD3Q9BSH5 MIR4324-201ENST00000584846 72 ntBASIC-1.03□□□□□ -2.57
HDHD3Q9BSH5 RNU6-844P-201ENST00000517175 102 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms