Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 SNORD18.2-201ENST00000459604 70 ntBASIC-1.03□□□□□ -2.57
KLHDC3Q9BQ90 MIR4306-201ENST00000583390 91 ntBASIC-1.03□□□□□ -2.57
KLHDC3Q9BQ90 MIR3657-201ENST00000584818 117 ntBASIC-1.03□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-208P-201ENST00000362431 107 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-774P-201ENST00000363238 107 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 MIR8485-201ENST00000401372 91 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 SCARNA18B-201ENST00000458806 135 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 RNA5SP147-201ENST00000516493 109 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 AC090617.8-201ENST00000623339 167 ntBASIC-1.04□□□□□ -2.58
KLHDC3Q9BQ90 MIR203A-201ENST00000384836 110 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 MIR1207-201ENST00000408249 87 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-554P-201ENST00000410466 106 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-706P-201ENST00000517229 104 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 AC140658.3-201ENST00000567603 271 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 AL353803.5-201ENST00000599815 141 ntBASIC-1.05□□□□□ -2.58
KLHDC3Q9BQ90 SNORA33.1-201ENST00000364957 130 ntBASIC-1.06□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-106P-201ENST00000384405 107 ntBASIC-1.06□□□□□ -2.58
KLHDC3Q9BQ90 HLA-S-202ENST00000425174 53 ntBASIC-1.06□□□□□ -2.58
KLHDC3Q9BQ90 MIR6129-201ENST00000616087 109 ntBASIC-1.06□□□□□ -2.58
KLHDC3Q9BQ90 U7.3-201ENST00000616123 62 ntBASIC-1.06□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.07□□□□□ -2.58
KLHDC3Q9BQ90 MIR124-2-201ENST00000385081 109 ntBASIC-1.07□□□□□ -2.58
KLHDC3Q9BQ90 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.07□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-752P-201ENST00000516376 102 ntBASIC-1.07□□□□□ -2.58
KLHDC3Q9BQ90 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.07□□□□□ -2.58
KLHDC3Q9BQ90 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.08□□□□□ -2.58
KLHDC3Q9BQ90 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.08□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-81P-201ENST00000365608 104 ntBASIC-1.09□□□□□ -2.58
KLHDC3Q9BQ90 MIR147A-201ENST00000385079 72 ntBASIC-1.09□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-162P-201ENST00000516228 103 ntBASIC-1.09□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-109P-201ENST00000516364 107 ntBASIC-1.09□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-184P-201ENST00000516514 107 ntBASIC-1.09□□□□□ -2.58
KLHDC3Q9BQ90 RNU6-834P-201ENST00000362367 110 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 RNY4P27-201ENST00000363341 96 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 MIR1255B2-201ENST00000408618 67 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 AL450471.1-201ENST00000447509 127 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 MIR4464-201ENST00000580818 92 ntBASIC-1.1□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-766P-201ENST00000362478 107 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-431P-201ENST00000383874 107 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-540P-201ENST00000384622 101 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 SNORA19-201ENST00000384737 128 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 MIR521-2-201ENST00000384818 87 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 AL365222.1-201ENST00000614661 98 ntBASIC-1.11□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 SNORD64-201ENST00000386683 67 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 CYP3A54P-201ENST00000566950 75 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 AL445584.3-201ENST00000617173 78 ntBASIC-1.12□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 MIR519C-201ENST00000385053 87 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-589P-201ENST00000516485 107 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 MIR6888-201ENST00000621977 67 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 MIR6739-201ENST00000622461 75 ntBASIC-1.13□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-681P-201ENST00000364012 104 ntBASIC-1.14□□□□□ -2.59
KLHDC3Q9BQ90 RNU7-153P-201ENST00000516455 62 ntBASIC-1.14□□□□□ -2.59
KLHDC3Q9BQ90 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.14□□□□□ -2.59
KLHDC3Q9BQ90 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.14□□□□□ -2.59
KLHDC3Q9BQ90 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
KLHDC3Q9BQ90 SNORD114-17-201ENST00000364699 75 ntBASIC-1.15□□□□□ -2.59
KLHDC3Q9BQ90 MTATP8P2-201ENST00000435212 202 ntBASIC-1.15□□□□□ -2.59
KLHDC3Q9BQ90 RNU7-154P-201ENST00000516194 62 ntBASIC-1.15□□□□□ -2.59
KLHDC3Q9BQ90 MIR382-201ENST00000637119 76 ntBASIC-1.15□□□□□ -2.59
KLHDC3Q9BQ90 RNU6-340P-201ENST00000364005 107 ntBASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 SNORD77.2-201ENST00000391045 68 ntBASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 MIR2052-201ENST00000636055 55 ntBASIC-1.16□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-924P-201ENST00000362926 108 ntBASIC-1.17□□□□□ -2.6
KLHDC3Q9BQ90 SNORD115-27-201ENST00000364430 82 ntBASIC-1.17□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.18□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.18□□□□□ -2.6
KLHDC3Q9BQ90 RNU7-134P-201ENST00000458997 64 ntBASIC-1.18□□□□□ -2.6
KLHDC3Q9BQ90 SNORD115-37-201ENST00000363768 82 ntBASIC-1.19□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.19□□□□□ -2.6
KLHDC3Q9BQ90 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-22P-201ENST00000384355 107 ntBASIC-1.2□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.2□□□□□ -2.6
KLHDC3Q9BQ90 MIR548M-201ENST00000408260 86 ntBASIC-1.2□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.2□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-633P-201ENST00000362612 103 ntBASIC-1.21□□□□□ -2.6
KLHDC3Q9BQ90 AL035461.1-201ENST00000421490 332 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 AL021921.1-201ENST00000442774 93 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 AL031737.1-201ENST00000450125 223 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 RNU6-479P-201ENST00000516348 105 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 snoU83B.1-201ENST00000517136 88 ntBASIC-1.22□□□□□ -2.6
KLHDC3Q9BQ90 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.23□□□□□ -2.61
KLHDC3Q9BQ90 MT-TR-201ENST00000387439 65 ntBASIC-1.23□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-518P-201ENST00000516056 96 ntBASIC-1.23□□□□□ -2.61
KLHDC3Q9BQ90 MIR4668-201ENST00000582284 70 ntBASIC-1.23□□□□□ -2.61
KLHDC3Q9BQ90 MIR4520-1-201ENST00000582609 70 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms