Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR504-201ENST00000385065 83 ntBASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR764-201ENST00000390811 85 ntBASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP489-201ENST00000410986 109 ntBASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR4263-201ENST00000584745 83 ntBASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
KRTAP4-12Q9BQ66 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 MIRLET7A2-201ENST00000362105 72 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.189-201ENST00000363959 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 RNA5SP163-201ENST00000410304 99 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORD105B-201ENST00000458770 79 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.647-201ENST00000459194 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.640-201ENST00000459296 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR4319-201ENST00000577285 85 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR4276-201ENST00000584832 70 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.803-201ENST00000614432 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.815-201ENST00000616655 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.795-201ENST00000619475 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 SMCR2_2.1-201ENST00000619783 161 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.827-201ENST00000638104 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-12Q9BQ66 RNA5SP37-201ENST00000365420 130 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR892B-201ENST00000401279 77 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR1289-2-201ENST00000408360 111 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORA74C-2-201ENST00000411179 201 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 AC097484.2-201ENST00000509147 251 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.663-201ENST00000516043 101 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 RNU6-180P-201ENST00000516697 61 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3179-1-201ENST00000578940 84 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR5004-201ENST00000579078 107 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3179-2-201ENST00000579107 84 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3179-3-201ENST00000579566 84 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3179-4-201ENST00000617599 84 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 Z82195.2-201ENST00000612348 18351 ntBASIC0.7□□□□□ -2.3
KRTAP4-12Q9BQ66 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.226-201ENST00000364337 114 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 RNU6-164P-201ENST00000364604 103 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORA70B-201ENST00000384210 135 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 RNA5SP424-201ENST00000390988 115 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 RNA5SP425-201ENST00000410336 112 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 AL603825.1-201ENST00000438481 80 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 AC244205.2-202ENST00000635781 342 ntBASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-12Q9BQ66 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORA70.9-201ENST00000384370 135 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR196B-201ENST00000384852 84 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR1287-201ENST00000408492 90 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 HLA-N-201ENST00000437516 135 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 RNU6-916P-201ENST00000516088 109 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 AC079600.2-201ENST00000550076 130 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR4644-201ENST00000579929 84 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 AC046143.2-201ENST00000609789 160 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR7851-201ENST00000610611 160 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 AP000553.6-201ENST00000641242 118 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 SCN1A-220ENST00000641603 12506 ntBASIC0.68□□□□□ -2.3
KRTAP4-12Q9BQ66 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 Y_RNA.355-201ENST00000365462 98 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR489-201ENST00000384923 84 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR199A2-201ENST00000385289 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR676-201ENST00000390702 67 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 snoU13.15-201ENST00000459407 104 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORD53-201ENST00000579969 78 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3123-201ENST00000583417 75 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR7702-201ENST00000621931 59 ntBASIC0.67□□□□□ -2.3
KRTAP4-12Q9BQ66 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
KRTAP4-12Q9BQ66 SNORA71.1-201ENST00000364523 117 ntBASIC0.66□□□□□ -2.3
KRTAP4-12Q9BQ66 MIR3605-201ENST00000583214 100 ntBASIC0.66□□□□□ -2.3
KRTAP4-12Q9BQ66 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RNA5SP289-201ENST00000362332 137 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RNU6-400P-201ENST00000391173 106 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 MIR921-201ENST00000401133 56 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 SNORA3.2-201ENST00000408221 125 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RNU4-47P-201ENST00000410876 114 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 snoU13.23-201ENST00000458863 104 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 SNORD109B-201ENST00000458961 67 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 SNORD109A-201ENST00000459128 67 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RN7SL499P-201ENST00000481141 276 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RNA5SP458-201ENST00000516188 119 ntBASIC0.65□□□□□ -2.31
KRTAP4-12Q9BQ66 RNA5SP24-201ENST00000516478 95 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 1891.1 ms