Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-412P-201ENST00000516434 106 ntBASIC-1.82□□□□□ -2.7
RPRD1AQ96P16 MIR6739-201ENST00000622461 75 ntBASIC-1.82□□□□□ -2.7
RPRD1AQ96P16 MIR527-201ENST00000385244 85 ntBASIC-1.83□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.83□□□□□ -2.7
RPRD1AQ96P16 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 RNY1P5-201ENST00000383890 115 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 MIR1236-201ENST00000408340 102 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 RNU6-518P-201ENST00000516056 96 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 RNU6-255P-201ENST00000516957 105 ntBASIC-1.84□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.85□□□□□ -2.71
RPRD1AQ96P16 SNORD116-21-201ENST00000384507 92 ntBASIC-1.85□□□□□ -2.71
RPRD1AQ96P16 RNU7-61P-201ENST00000515897 61 ntBASIC-1.85□□□□□ -2.71
RPRD1AQ96P16 RNU6-752P-201ENST00000516376 102 ntBASIC-1.85□□□□□ -2.71
RPRD1AQ96P16 RNU6-537P-201ENST00000517277 103 ntBASIC-1.85□□□□□ -2.71
RPRD1AQ96P16 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 SNORD115-22-201ENST00000364456 82 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 RNU6-576P-201ENST00000390854 102 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 MIR4520-1-201ENST00000582609 70 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 MIR4719-201ENST00000585233 84 ntBASIC-1.86□□□□□ -2.71
RPRD1AQ96P16 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.87□□□□□ -2.71
RPRD1AQ96P16 RNU4-61P-201ENST00000411243 107 ntBASIC-1.87□□□□□ -2.71
RPRD1AQ96P16 RNA5SP180-201ENST00000516181 101 ntBASIC-1.87□□□□□ -2.71
RPRD1AQ96P16 MIR4770-201ENST00000579149 58 ntBASIC-1.87□□□□□ -2.71
RPRD1AQ96P16 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.87□□□□□ -2.71
RPRD1AQ96P16 AL450471.1-201ENST00000447509 127 ntBASIC-1.88□□□□□ -2.71
RPRD1AQ96P16 RNU7-153P-201ENST00000516455 62 ntBASIC-1.88□□□□□ -2.71
RPRD1AQ96P16 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.88□□□□□ -2.71
RPRD1AQ96P16 MIR1246-201ENST00000636535 73 ntBASIC-1.89□□□□□ -2.71
RPRD1AQ96P16 MIR590-201ENST00000385008 97 ntBASIC-1.9□□□□□ -2.71
RPRD1AQ96P16 AL021921.1-201ENST00000442774 93 ntBASIC-1.9□□□□□ -2.71
RPRD1AQ96P16 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
RPRD1AQ96P16 AC091912.2-201ENST00000624798 167 ntBASIC-1.9□□□□□ -2.71
RPRD1AQ96P16 RNU6-907P-201ENST00000390924 102 ntBASIC-1.91□□□□□ -2.72
RPRD1AQ96P16 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.92□□□□□ -2.72
RPRD1AQ96P16 RNU6-340P-201ENST00000364005 107 ntBASIC-1.92□□□□□ -2.72
RPRD1AQ96P16 RNU6-162P-201ENST00000516228 103 ntBASIC-1.92□□□□□ -2.72
RPRD1AQ96P16 SNORD116-14-201ENST00000383894 92 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 SNORD116-17-201ENST00000383929 92 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 SNORD116-15-201ENST00000384445 92 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 SNORD116-19-201ENST00000384729 92 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 AL353691.2-201ENST00000443795 59 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 MIR6502-201ENST00000617296 76 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 MIR6874-201ENST00000635894 71 ntBASIC-1.93□□□□□ -2.72
RPRD1AQ96P16 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.94□□□□□ -2.72
RPRD1AQ96P16 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.94□□□□□ -2.72
RPRD1AQ96P16 MIR1302-5-201ENST00000408164 150 ntBASIC-1.94□□□□□ -2.72
RPRD1AQ96P16 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.94□□□□□ -2.72
RPRD1AQ96P16 MIR1285-2-201ENST00000408311 88 ntBASIC-1.95□□□□□ -2.72
RPRD1AQ96P16 RNU6-158P-201ENST00000517104 100 ntBASIC-1.95□□□□□ -2.72
RPRD1AQ96P16 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.95□□□□□ -2.72
RPRD1AQ96P16 U7.3-201ENST00000616123 62 ntBASIC-1.95□□□□□ -2.72
RPRD1AQ96P16 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.96□□□□□ -2.72
RPRD1AQ96P16 RNU6-681P-201ENST00000364012 104 ntBASIC-1.96□□□□□ -2.72
RPRD1AQ96P16 AL035461.1-201ENST00000421490 332 ntBASIC-1.96□□□□□ -2.72
RPRD1AQ96P16 RNU6-732P-201ENST00000516033 103 ntBASIC-1.96□□□□□ -2.72
RPRD1AQ96P16 MIR548AG1-201ENST00000579932 66 ntBASIC-1.96□□□□□ -2.72
RPRD1AQ96P16 SNORD115-27-201ENST00000364430 82 ntBASIC-1.97□□□□□ -2.72
RPRD1AQ96P16 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.97□□□□□ -2.72
RPRD1AQ96P16 RNU6-656P-201ENST00000516785 107 ntBASIC-1.97□□□□□ -2.72
RPRD1AQ96P16 AP002795.1-201ENST00000534879 84 ntBASIC-1.97□□□□□ -2.72
RPRD1AQ96P16 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 RNU6-164P-201ENST00000364604 103 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 RNU6-540P-201ENST00000384622 101 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 MIR507-201ENST00000385234 94 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 SNORD77.2-201ENST00000391045 68 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 RNU6-109P-201ENST00000516364 107 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 RNU6-184P-201ENST00000516514 107 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 MIR4723-201ENST00000585070 81 ntBASIC-1.98□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.99□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.99□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.99□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.99□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.99□□□□□ -2.73
RPRD1AQ96P16 MIR365A-201ENST00000362260 87 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 RNU6-246P-201ENST00000384702 107 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 RNU6-554P-201ENST00000410466 106 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 RNU7-88P-201ENST00000458752 63 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 U7.5-201ENST00000517224 61 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 U2.7-201ENST00000619197 100 ntBASIC-2.01□□□□□ -2.73
RPRD1AQ96P16 MIR519C-201ENST00000385053 87 ntBASIC-2.02□□□□□ -2.73
RPRD1AQ96P16 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.03□□□□□ -2.73
RPRD1AQ96P16 RNU6-106P-201ENST00000384405 107 ntBASIC-2.04□□□□□ -2.74
RPRD1AQ96P16 SNORD19-201ENST00000391191 68 ntBASIC-2.04□□□□□ -2.74
RPRD1AQ96P16 AL078595.1-201ENST00000404458 226 ntBASIC-2.04□□□□□ -2.74
RPRD1AQ96P16 RNU6-807P-201ENST00000516805 107 ntBASIC-2.04□□□□□ -2.74
RPRD1AQ96P16 U4.2-201ENST00000618561 85 ntBASIC-2.04□□□□□ -2.74
RPRD1AQ96P16 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
RPRD1AQ96P16 RNA5SP86-201ENST00000390869 98 ntBASIC-2.05□□□□□ -2.74
RPRD1AQ96P16 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.05□□□□□ -2.74
RPRD1AQ96P16 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.06□□□□□ -2.74
RPRD1AQ96P16 MIR4441-201ENST00000582623 100 ntBASIC-2.06□□□□□ -2.74
RPRD1AQ96P16 MIR5683-201ENST00000636514 76 ntBASIC-2.06□□□□□ -2.74
RPRD1AQ96P16 RNU6-774P-201ENST00000363238 107 ntBASIC-2.07□□□□□ -2.74
RPRD1AQ96P16 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.07□□□□□ -2.74
RPRD1AQ96P16 SNORA19-201ENST00000384737 128 ntBASIC-2.07□□□□□ -2.74
RPRD1AQ96P16 MIR4490-201ENST00000582647 84 ntBASIC-2.07□□□□□ -2.74
RPRD1AQ96P16 AC090425.1-201ENST00000610007 140 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 257.3 ms