Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
SHKBP1Q8TBC3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
SHKBP1Q8TBC3 SNORA2A-201ENST00000383885 135 ntBASIC0.93□□□□□ -2.26
SHKBP1Q8TBC3 RNU6-246P-201ENST00000384702 107 ntBASIC0.93□□□□□ -2.26
SHKBP1Q8TBC3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SHKBP1Q8TBC3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.93□□□□□ -2.26
SHKBP1Q8TBC3 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
SHKBP1Q8TBC3 RNU4-33P-201ENST00000364316 85 ntBASIC0.92□□□□□ -2.26
SHKBP1Q8TBC3 RNU6-35P-201ENST00000384530 107 ntBASIC0.92□□□□□ -2.26
SHKBP1Q8TBC3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
SHKBP1Q8TBC3 RNU6-229P-201ENST00000516614 102 ntBASIC0.92□□□□□ -2.26
SHKBP1Q8TBC3 SNORD1B-201ENST00000363091 84 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 MIR598-201ENST00000384868 97 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 MIRLET7B-201ENST00000385140 83 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 SNORA40.8-201ENST00000411034 126 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 RNA5SP470-201ENST00000516463 106 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
SHKBP1Q8TBC3 Y_RNA.109-201ENST00000363215 102 ntBASIC0.9□□□□□ -2.27
SHKBP1Q8TBC3 SNORA40B-201ENST00000385573 128 ntBASIC0.9□□□□□ -2.27
SHKBP1Q8TBC3 MIR4677-201ENST00000584153 80 ntBASIC0.9□□□□□ -2.27
SHKBP1Q8TBC3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-502P-201ENST00000362419 108 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-810P-201ENST00000364001 107 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 MIR501-201ENST00000390204 84 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-172P-201ENST00000411000 93 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 RNA5SP480-201ENST00000516840 109 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 MIR548X-201ENST00000580069 75 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 MIR6755-201ENST00000619993 66 ntBASIC0.89□□□□□ -2.27
SHKBP1Q8TBC3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.87□□□□□ -2.27
SHKBP1Q8TBC3 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
SHKBP1Q8TBC3 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-458P-201ENST00000384179 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-848P-201ENST00000515948 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-617P-201ENST00000516147 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-473P-201ENST00000516164 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 U6.58-201ENST00000613107 107 ntBASIC0.86□□□□□ -2.27
SHKBP1Q8TBC3 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
SHKBP1Q8TBC3 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-782P-201ENST00000516852 104 ntBASIC0.85□□□□□ -2.27
SHKBP1Q8TBC3 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
SHKBP1Q8TBC3 MIR429-201ENST00000362106 83 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 RNU6-930P-201ENST00000390938 100 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 MIR4490-201ENST00000582647 84 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 RN7SL660P-201ENST00000614852 299 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 AC084368.1-201ENST00000620935 65 ntBASIC0.84□□□□□ -2.27
SHKBP1Q8TBC3 SNORD114-26-201ENST00000363543 72 ntBASIC0.82□□□□□ -2.28
SHKBP1Q8TBC3 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
SHKBP1Q8TBC3 MIR760-201ENST00000390220 80 ntBASIC0.82□□□□□ -2.28
SHKBP1Q8TBC3 AC098934.3-201ENST00000430450 190 ntBASIC0.82□□□□□ -2.28
SHKBP1Q8TBC3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SHKBP1Q8TBC3 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
SHKBP1Q8TBC3 MIR548F3-201ENST00000408509 87 ntBASIC0.81□□□□□ -2.28
SHKBP1Q8TBC3 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
SHKBP1Q8TBC3 MIR3925-201ENST00000584674 77 ntBASIC0.81□□□□□ -2.28
SHKBP1Q8TBC3 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
SHKBP1Q8TBC3 MIR876-201ENST00000401147 81 ntBASIC0.8□□□□□ -2.28
SHKBP1Q8TBC3 AL353803.5-201ENST00000599815 141 ntBASIC0.8□□□□□ -2.28
SHKBP1Q8TBC3 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
SHKBP1Q8TBC3 RNU6-598P-201ENST00000364017 105 ntBASIC0.79□□□□□ -2.28
SHKBP1Q8TBC3 SNORD115-23-201ENST00000364461 82 ntBASIC0.79□□□□□ -2.28
SHKBP1Q8TBC3 RNA5SP128-201ENST00000365305 116 ntBASIC0.79□□□□□ -2.28
SHKBP1Q8TBC3 RNU6-419P-201ENST00000517030 63 ntBASIC0.79□□□□□ -2.28
SHKBP1Q8TBC3 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
SHKBP1Q8TBC3 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
SHKBP1Q8TBC3 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
SHKBP1Q8TBC3 MIR6779-201ENST00000617283 64 ntBASIC0.77□□□□□ -2.29
SHKBP1Q8TBC3 MIR499B-201ENST00000636498 73 ntBASIC0.77□□□□□ -2.29
SHKBP1Q8TBC3 MIR106A-201ENST00000384870 81 ntBASIC0.76□□□□□ -2.29
SHKBP1Q8TBC3 U2.18-201ENST00000622185 84 ntBASIC0.76□□□□□ -2.29
SHKBP1Q8TBC3 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
SHKBP1Q8TBC3 RNU6-838P-201ENST00000363399 108 ntBASIC0.75□□□□□ -2.29
SHKBP1Q8TBC3 MIR579-201ENST00000385221 98 ntBASIC0.75□□□□□ -2.29
SHKBP1Q8TBC3 RNU7-160P-201ENST00000516660 62 ntBASIC0.75□□□□□ -2.29
SHKBP1Q8TBC3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SHKBP1Q8TBC3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SHKBP1Q8TBC3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.74□□□□□ -2.29
SHKBP1Q8TBC3 Y_RNA.698-201ENST00000516798 118 ntBASIC0.74□□□□□ -2.29
SHKBP1Q8TBC3 RNU7-151P-201ENST00000516930 53 ntBASIC0.74□□□□□ -2.29
SHKBP1Q8TBC3 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
SHKBP1Q8TBC3 AP000676.1-201ENST00000533307 52 ntBASIC0.73□□□□□ -2.29
SHKBP1Q8TBC3 RN7SL793P-201ENST00000583259 296 ntBASIC0.73□□□□□ -2.29
SHKBP1Q8TBC3 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
SHKBP1Q8TBC3 Y_RNA.69-201ENST00000362885 109 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 RNU6-924P-201ENST00000362926 108 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 MIR216A-201ENST00000385063 110 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 RNU6-863P-201ENST00000515989 104 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 RNU7-129P-201ENST00000516128 62 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 RNU6-1206P-201ENST00000516339 103 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 AC108676.2-201ENST00000605225 163 ntBASIC0.72□□□□□ -2.29
SHKBP1Q8TBC3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
SHKBP1Q8TBC3 SNORD44.1-201ENST00000363202 61 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms