Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 AL035461.1-201ENST00000421490 332 ntBASIC-1.11□□□□□ -2.59
CCDC54Q8NEL0 RNU6-497P-201ENST00000365316 104 ntBASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 RNU6-22P-201ENST00000384355 107 ntBASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 RNU6-752P-201ENST00000516376 102 ntBASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 RNU6-656P-201ENST00000516785 107 ntBASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC54Q8NEL0 MIR450A1-201ENST00000362262 91 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 RNU6-633P-201ENST00000362612 103 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 RNU6-30P-201ENST00000384561 107 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 SCARNA17-201ENST00000516183 144 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 RNU7-154P-201ENST00000516194 62 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.13□□□□□ -2.59
CCDC54Q8NEL0 SNORD77.2-201ENST00000391045 68 ntBASIC-1.14□□□□□ -2.59
CCDC54Q8NEL0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
CCDC54Q8NEL0 MIR4668-201ENST00000582284 70 ntBASIC-1.14□□□□□ -2.59
CCDC54Q8NEL0 MIR4499-201ENST00000584834 69 ntBASIC-1.14□□□□□ -2.59
CCDC54Q8NEL0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.14□□□□□ -2.59
CCDC54Q8NEL0 RNU6-834P-201ENST00000362367 110 ntBASIC-1.15□□□□□ -2.59
CCDC54Q8NEL0 RNU6-624P-201ENST00000363411 107 ntBASIC-1.15□□□□□ -2.59
CCDC54Q8NEL0 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.15□□□□□ -2.59
CCDC54Q8NEL0 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.15□□□□□ -2.59
CCDC54Q8NEL0 RNU6-518P-201ENST00000516056 96 ntBASIC-1.15□□□□□ -2.59
CCDC54Q8NEL0 SNORD115-22-201ENST00000364456 82 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 RNU6-219P-201ENST00000364728 107 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 RNY4P18-201ENST00000391107 89 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 RNU6-267P-201ENST00000516714 103 ntBASIC-1.16□□□□□ -2.6
CCDC54Q8NEL0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.17□□□□□ -2.6
CCDC54Q8NEL0 RNA5SP67-201ENST00000516422 131 ntBASIC-1.17□□□□□ -2.6
CCDC54Q8NEL0 U2.7-201ENST00000619197 100 ntBASIC-1.17□□□□□ -2.6
CCDC54Q8NEL0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.17□□□□□ -2.6
CCDC54Q8NEL0 RNU6-330P-201ENST00000363015 107 ntBASIC-1.18□□□□□ -2.6
CCDC54Q8NEL0 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.18□□□□□ -2.6
CCDC54Q8NEL0 AC140658.3-201ENST00000567603 271 ntBASIC-1.18□□□□□ -2.6
CCDC54Q8NEL0 AP001318.4-201ENST00000616637 121 ntBASIC-1.18□□□□□ -2.6
CCDC54Q8NEL0 uc_338.19-201ENST00000616808 99 ntBASIC-1.18□□□□□ -2.6
CCDC54Q8NEL0 RNU6-924P-201ENST00000362926 108 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 RNU6-246P-201ENST00000384702 107 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 SNORA26.4-201ENST00000391188 123 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 RNA5SP476-201ENST00000516613 103 ntBASIC-1.2□□□□□ -2.6
CCDC54Q8NEL0 MIR488-201ENST00000365739 83 ntBASIC-1.21□□□□□ -2.6
CCDC54Q8NEL0 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.21□□□□□ -2.6
CCDC54Q8NEL0 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.21□□□□□ -2.6
CCDC54Q8NEL0 RNU6-402P-201ENST00000410678 103 ntBASIC-1.21□□□□□ -2.6
CCDC54Q8NEL0 MALAT1.1-201ENST00000618249 95 ntBASIC-1.21□□□□□ -2.6
CCDC54Q8NEL0 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 MIR548M-201ENST00000408260 86 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 AL031737.1-201ENST00000450125 223 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 AP002795.1-201ENST00000534879 84 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 MIR3910-1-201ENST00000580936 111 ntBASIC-1.22□□□□□ -2.6
CCDC54Q8NEL0 RNU6-478P-201ENST00000363904 110 ntBASIC-1.23□□□□□ -2.61
CCDC54Q8NEL0 RNU6-681P-201ENST00000364012 104 ntBASIC-1.23□□□□□ -2.61
CCDC54Q8NEL0 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.23□□□□□ -2.61
CCDC54Q8NEL0 AL021921.1-201ENST00000442774 93 ntBASIC-1.23□□□□□ -2.61
CCDC54Q8NEL0 AC093729.1-201ENST00000513074 128 ntBASIC-1.23□□□□□ -2.61
CCDC54Q8NEL0 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
CCDC54Q8NEL0 RNU6-645P-201ENST00000364649 106 ntBASIC-1.24□□□□□ -2.61
CCDC54Q8NEL0 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.24□□□□□ -2.61
CCDC54Q8NEL0 MIR6738-201ENST00000619620 64 ntBASIC-1.24□□□□□ -2.61
CCDC54Q8NEL0 MIR548BB-201ENST00000626714 66 ntBASIC-1.24□□□□□ -2.61
CCDC54Q8NEL0 RNU6-640P-201ENST00000363693 105 ntBASIC-1.25□□□□□ -2.61
CCDC54Q8NEL0 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.25□□□□□ -2.61
CCDC54Q8NEL0 SNORD113-1-201ENST00000365321 69 ntBASIC-1.25□□□□□ -2.61
CCDC54Q8NEL0 MIR2052-201ENST00000636055 55 ntBASIC-1.25□□□□□ -2.61
CCDC54Q8NEL0 SNORD19-201ENST00000391191 68 ntBASIC-1.26□□□□□ -2.61
CCDC54Q8NEL0 RNU6-313P-201ENST00000516317 112 ntBASIC-1.26□□□□□ -2.61
CCDC54Q8NEL0 RNU6-557P-201ENST00000516842 110 ntBASIC-1.26□□□□□ -2.61
CCDC54Q8NEL0 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 SNORD115-37-201ENST00000363768 82 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 RNU6-755P-201ENST00000364400 103 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 SNORD116-22-201ENST00000384430 92 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 RNU2-51P-201ENST00000410708 197 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 AC074348.1-201ENST00000426503 132 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 HAR1A.1-201ENST00000459583 118 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 snoU83B.1-201ENST00000517136 88 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 U7.5-201ENST00000517224 61 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 RNY1P9-201ENST00000532431 109 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 MIR4324-201ENST00000584846 72 ntBASIC-1.27□□□□□ -2.61
CCDC54Q8NEL0 RNA5SP26-201ENST00000362406 119 ntBASIC-1.28□□□□□ -2.61
CCDC54Q8NEL0 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.28□□□□□ -2.61
CCDC54Q8NEL0 MIR587-201ENST00000384845 96 ntBASIC-1.28□□□□□ -2.61
CCDC54Q8NEL0 RNU7-88P-201ENST00000458752 63 ntBASIC-1.28□□□□□ -2.61
CCDC54Q8NEL0 RNU6-982P-201ENST00000516216 102 ntBASIC-1.28□□□□□ -2.61
CCDC54Q8NEL0 RNU6-10P-201ENST00000384036 107 ntBASIC-1.29□□□□□ -2.62
CCDC54Q8NEL0 SNORD57-201ENST00000448188 72 ntBASIC-1.29□□□□□ -2.62
CCDC54Q8NEL0 RNU6-732P-201ENST00000516033 103 ntBASIC-1.29□□□□□ -2.62
CCDC54Q8NEL0 SNORA40.13-201ENST00000516379 120 ntBASIC-1.29□□□□□ -2.62
CCDC54Q8NEL0 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms