Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU6-604P-201ENST00000390917 100 ntBASIC0.03□□□□□ -2.4
CLIP4Q8N3C7 U6.96-201ENST00000636425 70 ntBASIC0.03□□□□□ -2.4
CLIP4Q8N3C7 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
CLIP4Q8N3C7 SNORD115-25-201ENST00000362619 82 ntBASIC0.02□□□□□ -2.41
CLIP4Q8N3C7 SNORA33.1-201ENST00000364957 130 ntBASIC0.02□□□□□ -2.41
CLIP4Q8N3C7 MIR521-2-201ENST00000384818 87 ntBASIC0.02□□□□□ -2.41
CLIP4Q8N3C7 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.02□□□□□ -2.41
CLIP4Q8N3C7 RNA5SP257-201ENST00000363023 116 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 Y_RNA.244-201ENST00000364484 109 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR8053-201ENST00000613344 75 ntBASIC0.01□□□□□ -2.41
CLIP4Q8N3C7 SNORD115-22-201ENST00000364456 82 ntBASIC0□□□□□ -2.41
CLIP4Q8N3C7 RNU6-1241P-201ENST00000384536 107 ntBASIC0□□□□□ -2.41
CLIP4Q8N3C7 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CLIP4Q8N3C7 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
CLIP4Q8N3C7 RNU6-502P-201ENST00000362419 108 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 RNU6-645P-201ENST00000364649 106 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 RNU6-411P-201ENST00000384451 107 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR154-201ENST00000385243 84 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR889-201ENST00000401280 79 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR6773-201ENST00000612812 74 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
CLIP4Q8N3C7 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 RNU6-337P-201ENST00000391243 106 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 RNU6-587P-201ENST00000391282 106 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 RNU6-982P-201ENST00000516216 102 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 RNU6-656P-201ENST00000516785 107 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 MIR4662A-201ENST00000637499 67 ntBASIC-0.02□□□□□ -2.41
CLIP4Q8N3C7 SNORD45A-201ENST00000384512 84 ntBASIC-0.03□□□□□ -2.41
CLIP4Q8N3C7 RNU6-687P-201ENST00000516443 89 ntBASIC-0.03□□□□□ -2.41
CLIP4Q8N3C7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
CLIP4Q8N3C7 SNORD113.1-201ENST00000363280 73 ntBASIC-0.04□□□□□ -2.42
CLIP4Q8N3C7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CLIP4Q8N3C7 CYP3A54P-201ENST00000566950 75 ntBASIC-0.04□□□□□ -2.42
CLIP4Q8N3C7 AC090617.8-201ENST00000623339 167 ntBASIC-0.04□□□□□ -2.42
CLIP4Q8N3C7 RNU6-46P-201ENST00000383860 107 ntBASIC-0.05□□□□□ -2.42
CLIP4Q8N3C7 RNU6-455P-201ENST00000384681 107 ntBASIC-0.05□□□□□ -2.42
CLIP4Q8N3C7 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
CLIP4Q8N3C7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP4Q8N3C7 RNU6-776P-201ENST00000364403 104 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 MIRLET7B-201ENST00000385140 83 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 AC244250.2-201ENST00000418731 148 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 RNU6-881P-201ENST00000516813 102 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.06□□□□□ -2.42
CLIP4Q8N3C7 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
CLIP4Q8N3C7 RNU6-900P-201ENST00000384498 102 ntBASIC-0.07□□□□□ -2.42
CLIP4Q8N3C7 MTND4LP1-201ENST00000446263 157 ntBASIC-0.07□□□□□ -2.42
CLIP4Q8N3C7 RNU6-638P-201ENST00000516582 104 ntBASIC-0.07□□□□□ -2.42
CLIP4Q8N3C7 SNORD115-31-201ENST00000365318 82 ntBASIC-0.08□□□□□ -2.42
CLIP4Q8N3C7 RNU6-895P-201ENST00000384125 103 ntBASIC-0.08□□□□□ -2.42
CLIP4Q8N3C7 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.08□□□□□ -2.42
CLIP4Q8N3C7 MIR9-2-201ENST00000384838 87 ntBASIC-0.08□□□□□ -2.42
CLIP4Q8N3C7 MIR1255B2-201ENST00000408618 67 ntBASIC-0.08□□□□□ -2.42
CLIP4Q8N3C7 MIR655-201ENST00000362159 97 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 SNORD49B-201ENST00000365172 72 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 MIR548C-201ENST00000384815 97 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 RNU6-523P-201ENST00000516304 54 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 uc_338.36-201ENST00000622331 158 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
CLIP4Q8N3C7 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.1□□□□□ -2.43
CLIP4Q8N3C7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
CLIP4Q8N3C7 RNU7-55P-201ENST00000459426 62 ntBASIC-0.1□□□□□ -2.43
CLIP4Q8N3C7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
CLIP4Q8N3C7 snoR1.1-201ENST00000628177 80 ntBASIC-0.1□□□□□ -2.43
CLIP4Q8N3C7 RNU6-668P-201ENST00000364180 107 ntBASIC-0.11□□□□□ -2.43
CLIP4Q8N3C7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
CLIP4Q8N3C7 RNU6-634P-201ENST00000459134 106 ntBASIC-0.11□□□□□ -2.43
CLIP4Q8N3C7 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.11□□□□□ -2.43
CLIP4Q8N3C7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.12□□□□□ -2.43
CLIP4Q8N3C7 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.12□□□□□ -2.43
CLIP4Q8N3C7 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.12□□□□□ -2.43
CLIP4Q8N3C7 U2.7-201ENST00000619197 100 ntBASIC-0.12□□□□□ -2.43
CLIP4Q8N3C7 AL391099.1-201ENST00000624635 187 ntBASIC-0.12□□□□□ -2.43
CLIP4Q8N3C7 RNU6-901P-201ENST00000384593 106 ntBASIC-0.13□□□□□ -2.43
CLIP4Q8N3C7 RNA5SP470-201ENST00000516463 106 ntBASIC-0.13□□□□□ -2.43
CLIP4Q8N3C7 RNA5SP285-201ENST00000516619 119 ntBASIC-0.13□□□□□ -2.43
CLIP4Q8N3C7 RNU6-973P-201ENST00000364690 107 ntBASIC-0.14□□□□□ -2.43
CLIP4Q8N3C7 MIR329-2-201ENST00000385029 84 ntBASIC-0.14□□□□□ -2.43
CLIP4Q8N3C7 RNU6-871P-201ENST00000516122 100 ntBASIC-0.14□□□□□ -2.43
CLIP4Q8N3C7 MIR4432-201ENST00000581823 84 ntBASIC-0.14□□□□□ -2.43
CLIP4Q8N3C7 SNORD115-23-201ENST00000364461 82 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 SNORD116-24-201ENST00000384549 92 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 RNU6-540P-201ENST00000384622 101 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 AL445193.1-201ENST00000441183 141 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 RNU6-518P-201ENST00000516056 96 ntBASIC-0.15□□□□□ -2.43
CLIP4Q8N3C7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 SNORD56B-201ENST00000384713 71 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 MIR519A2-201ENST00000384990 87 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 AL021921.1-201ENST00000442774 93 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 SNORD4A-201ENST00000459174 72 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 MIR5704-201ENST00000584029 77 ntBASIC-0.16□□□□□ -2.44
CLIP4Q8N3C7 AC096531.1-201ENST00000419107 107 ntBASIC-0.17□□□□□ -2.44
CLIP4Q8N3C7 MIR4263-201ENST00000584745 83 ntBASIC-0.17□□□□□ -2.44
CLIP4Q8N3C7 AL353803.5-201ENST00000599815 141 ntBASIC-0.17□□□□□ -2.44
CLIP4Q8N3C7 MIR6759-201ENST00000638110 65 ntBASIC-0.17□□□□□ -2.44
CLIP4Q8N3C7 RNA5SP215-201ENST00000363440 122 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms