Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR518A1-201ENST00000385068 85 ntBASIC1.05□□□□□ -2.24
CCDC116Q8IYX3 MIRLET7B-201ENST00000385140 83 ntBASIC1.05□□□□□ -2.24
CCDC116Q8IYX3 RNA5SP470-201ENST00000516463 106 ntBASIC1.05□□□□□ -2.24
CCDC116Q8IYX3 RNU6-980P-201ENST00000516925 103 ntBASIC1.05□□□□□ -2.24
CCDC116Q8IYX3 RNU6-1036P-201ENST00000383959 104 ntBASIC1.04□□□□□ -2.24
CCDC116Q8IYX3 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
CCDC116Q8IYX3 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
CCDC116Q8IYX3 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
CCDC116Q8IYX3 SNORD1B-201ENST00000363091 84 ntBASIC1.03□□□□□ -2.24
CCDC116Q8IYX3 AC084368.1-201ENST00000620935 65 ntBASIC1.03□□□□□ -2.24
CCDC116Q8IYX3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC116Q8IYX3 RNU6-502P-201ENST00000362419 108 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 Y_RNA.109-201ENST00000363215 102 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 RNU6-782P-201ENST00000516852 104 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
CCDC116Q8IYX3 MIR429-201ENST00000362106 83 ntBASIC1.01□□□□□ -2.25
CCDC116Q8IYX3 SNORA40B-201ENST00000385573 128 ntBASIC1.01□□□□□ -2.25
CCDC116Q8IYX3 MIR760-201ENST00000390220 80 ntBASIC1.01□□□□□ -2.25
CCDC116Q8IYX3 RNU6-172P-201ENST00000411000 93 ntBASIC1.01□□□□□ -2.25
CCDC116Q8IYX3 RNU6-810P-201ENST00000364001 107 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 RNU6-848P-201ENST00000515948 107 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 RNU6-617P-201ENST00000516147 107 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 RNU6-473P-201ENST00000516164 107 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 RNU6-1049P-201ENST00000516414 107 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
CCDC116Q8IYX3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC116Q8IYX3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CCDC116Q8IYX3 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
CCDC116Q8IYX3 RNU4-33P-201ENST00000364316 85 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 RNU6-458P-201ENST00000384179 107 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 RNU6-110P-201ENST00000384508 104 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 AL590095.2-201ENST00000604136 117 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 U6.58-201ENST00000613107 107 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 RN7SL660P-201ENST00000614852 299 ntBASIC0.98□□□□□ -2.25
CCDC116Q8IYX3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.97□□□□□ -2.25
CCDC116Q8IYX3 AC098934.3-201ENST00000430450 190 ntBASIC0.97□□□□□ -2.25
CCDC116Q8IYX3 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
CCDC116Q8IYX3 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
CCDC116Q8IYX3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.96□□□□□ -2.26
CCDC116Q8IYX3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 RNA5SP128-201ENST00000365305 116 ntBASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 RNU6-35P-201ENST00000384530 107 ntBASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 MIR548X-201ENST00000580069 75 ntBASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC116Q8IYX3 MIR3925-201ENST00000584674 77 ntBASIC0.94□□□□□ -2.26
CCDC116Q8IYX3 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
CCDC116Q8IYX3 MIR876-201ENST00000401147 81 ntBASIC0.93□□□□□ -2.26
CCDC116Q8IYX3 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
CCDC116Q8IYX3 RNU7-129P-201ENST00000516128 62 ntBASIC0.93□□□□□ -2.26
CCDC116Q8IYX3 MIR499B-201ENST00000636498 73 ntBASIC0.93□□□□□ -2.26
CCDC116Q8IYX3 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
CCDC116Q8IYX3 AL353803.5-201ENST00000599815 141 ntBASIC0.92□□□□□ -2.26
CCDC116Q8IYX3 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
CCDC116Q8IYX3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC116Q8IYX3 AP000676.1-201ENST00000533307 52 ntBASIC0.9□□□□□ -2.27
CCDC116Q8IYX3 MIR4490-201ENST00000582647 84 ntBASIC0.9□□□□□ -2.27
CCDC116Q8IYX3 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.9□□□□□ -2.27
CCDC116Q8IYX3 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
CCDC116Q8IYX3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.89□□□□□ -2.27
CCDC116Q8IYX3 RNA5SP457-201ENST00000363657 124 ntBASIC0.89□□□□□ -2.27
CCDC116Q8IYX3 MIR193B-201ENST00000384907 83 ntBASIC0.89□□□□□ -2.27
CCDC116Q8IYX3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC116Q8IYX3 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
CCDC116Q8IYX3 SNORD115-23-201ENST00000364461 82 ntBASIC0.88□□□□□ -2.27
CCDC116Q8IYX3 RNU6-598P-201ENST00000364017 105 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 MIR106A-201ENST00000384870 81 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 RNU6-930P-201ENST00000390938 100 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 RNU6-863P-201ENST00000515989 104 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 MIR1273G-201ENST00000577677 100 ntBASIC0.87□□□□□ -2.27
CCDC116Q8IYX3 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
CCDC116Q8IYX3 U2.18-201ENST00000622185 84 ntBASIC0.86□□□□□ -2.27
CCDC116Q8IYX3 MIR579-201ENST00000385221 98 ntBASIC0.85□□□□□ -2.27
CCDC116Q8IYX3 SNORD44.1-201ENST00000363202 61 ntBASIC0.84□□□□□ -2.27
CCDC116Q8IYX3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.84□□□□□ -2.27
CCDC116Q8IYX3 snoR1.1-201ENST00000628177 80 ntBASIC0.84□□□□□ -2.27
CCDC116Q8IYX3 RNU6-945P-201ENST00000383947 107 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 RNU6-419P-201ENST00000517030 63 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 MIR4432-201ENST00000581823 84 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 AC108676.2-201ENST00000605225 163 ntBASIC0.83□□□□□ -2.28
CCDC116Q8IYX3 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
CCDC116Q8IYX3 RNU7-160P-201ENST00000516660 62 ntBASIC0.81□□□□□ -2.28
CCDC116Q8IYX3 RNU7-151P-201ENST00000516930 53 ntBASIC0.81□□□□□ -2.28
CCDC116Q8IYX3 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
CCDC116Q8IYX3 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
CCDC116Q8IYX3 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
CCDC116Q8IYX3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC116Q8IYX3 RNA5SP98-201ENST00000363158 137 ntBASIC0.8□□□□□ -2.28
CCDC116Q8IYX3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.8□□□□□ -2.28
CCDC116Q8IYX3 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
CCDC116Q8IYX3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CCDC116Q8IYX3 Y_RNA.698-201ENST00000516798 118 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms