Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORD118-201ENST00000363593 134 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 RNU6-458P-201ENST00000384179 107 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 MIR489-201ENST00000384923 84 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 MIRLET7B-201ENST00000385140 83 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 SNORD2-201ENST00000459163 69 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 U6.58-201ENST00000613107 107 ntBASIC0.87□□□□□ -2.27
ATG4DQ86TL0 MIR579-201ENST00000385221 98 ntBASIC0.86□□□□□ -2.27
ATG4DQ86TL0 MIR4677-201ENST00000584153 80 ntBASIC0.86□□□□□ -2.27
ATG4DQ86TL0 RNU6-502P-201ENST00000362419 108 ntBASIC0.85□□□□□ -2.27
ATG4DQ86TL0 MIR501-201ENST00000390204 84 ntBASIC0.85□□□□□ -2.27
ATG4DQ86TL0 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
ATG4DQ86TL0 RNA5SP470-201ENST00000516463 106 ntBASIC0.85□□□□□ -2.27
ATG4DQ86TL0 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
ATG4DQ86TL0 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
ATG4DQ86TL0 U7.6-201ENST00000610841 64 ntBASIC0.84□□□□□ -2.27
ATG4DQ86TL0 RN7SL660P-201ENST00000614852 299 ntBASIC0.84□□□□□ -2.27
ATG4DQ86TL0 MIR6755-201ENST00000619993 66 ntBASIC0.84□□□□□ -2.27
ATG4DQ86TL0 AC084368.1-201ENST00000620935 65 ntBASIC0.84□□□□□ -2.27
ATG4DQ86TL0 MIR548F3-201ENST00000408509 87 ntBASIC0.83□□□□□ -2.28
ATG4DQ86TL0 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
ATG4DQ86TL0 RNU6-598P-201ENST00000364017 105 ntBASIC0.82□□□□□ -2.28
ATG4DQ86TL0 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
ATG4DQ86TL0 MIR6734-201ENST00000621166 68 ntBASIC0.82□□□□□ -2.28
ATG4DQ86TL0 U2.18-201ENST00000622185 84 ntBASIC0.82□□□□□ -2.28
ATG4DQ86TL0 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
ATG4DQ86TL0 MIR760-201ENST00000390220 80 ntBASIC0.81□□□□□ -2.28
ATG4DQ86TL0 SNORD71-201ENST00000411292 86 ntBASIC0.81□□□□□ -2.28
ATG4DQ86TL0 AL353803.5-201ENST00000599815 141 ntBASIC0.81□□□□□ -2.28
ATG4DQ86TL0 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
ATG4DQ86TL0 MIR429-201ENST00000362106 83 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 snoU13.18-201ENST00000459483 104 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 MIR499B-201ENST00000636498 73 ntBASIC0.8□□□□□ -2.28
ATG4DQ86TL0 RNA5SP436-201ENST00000516020 115 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 RNA5SP220-201ENST00000516298 104 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 RNU7-151P-201ENST00000516930 53 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 RNU6-419P-201ENST00000517030 63 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 MIR3925-201ENST00000584674 77 ntBASIC0.79□□□□□ -2.28
ATG4DQ86TL0 RNU6-924P-201ENST00000362926 108 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 RNU6-42P-201ENST00000384165 107 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 MIR545-201ENST00000385085 106 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 AP000676.1-201ENST00000533307 52 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 AC022709.1-201ENST00000615967 87 ntBASIC0.78□□□□□ -2.28
ATG4DQ86TL0 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
ATG4DQ86TL0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
ATG4DQ86TL0 RNU6-838P-201ENST00000363399 108 ntBASIC0.76□□□□□ -2.29
ATG4DQ86TL0 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
ATG4DQ86TL0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.76□□□□□ -2.29
ATG4DQ86TL0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
ATG4DQ86TL0 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
ATG4DQ86TL0 MIR4432-201ENST00000581823 84 ntBASIC0.75□□□□□ -2.29
ATG4DQ86TL0 Y_RNA.69-201ENST00000362885 109 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 SNORD115-23-201ENST00000364461 82 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 AC108676.2-201ENST00000605225 163 ntBASIC0.74□□□□□ -2.29
ATG4DQ86TL0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ATG4DQ86TL0 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
ATG4DQ86TL0 RNU6-1262P-201ENST00000516217 96 ntBASIC0.73□□□□□ -2.29
ATG4DQ86TL0 RNU6-1206P-201ENST00000516339 103 ntBASIC0.73□□□□□ -2.29
ATG4DQ86TL0 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
ATG4DQ86TL0 MIR876-201ENST00000401147 81 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 RNU7-88P-201ENST00000458752 63 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 Y_RNA.698-201ENST00000516798 118 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
ATG4DQ86TL0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
ATG4DQ86TL0 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
ATG4DQ86TL0 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
ATG4DQ86TL0 uc_338.36-201ENST00000622331 158 ntBASIC0.71□□□□□ -2.3
ATG4DQ86TL0 snoR1.1-201ENST00000628177 80 ntBASIC0.71□□□□□ -2.3
ATG4DQ86TL0 RNU6-848P-201ENST00000515948 107 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 RNU6-617P-201ENST00000516147 107 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 RNU6-473P-201ENST00000516164 107 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 RNU7-160P-201ENST00000516660 62 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 U7.5-201ENST00000517224 61 ntBASIC0.7□□□□□ -2.3
ATG4DQ86TL0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
ATG4DQ86TL0 RNU6-247P-201ENST00000362636 107 ntBASIC0.69□□□□□ -2.3
ATG4DQ86TL0 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
ATG4DQ86TL0 MIR329-2-201ENST00000385029 84 ntBASIC0.69□□□□□ -2.3
ATG4DQ86TL0 RNU6-1267P-201ENST00000410747 107 ntBASIC0.69□□□□□ -2.3
ATG4DQ86TL0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.69□□□□□ -2.3
ATG4DQ86TL0 MIR548AA1-201ENST00000384971 97 ntBASIC0.68□□□□□ -2.3
ATG4DQ86TL0 RNU6-995P-201ENST00000391244 107 ntBASIC0.68□□□□□ -2.3
ATG4DQ86TL0 MIR6888-201ENST00000621977 67 ntBASIC0.68□□□□□ -2.3
ATG4DQ86TL0 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
ATG4DQ86TL0 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
ATG4DQ86TL0 RNU6-696P-201ENST00000390834 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms