Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
RNF43Q68DV7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RNF43Q68DV7 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
RNF43Q68DV7 SNORA40.16-201ENST00000517238 121 ntBASIC0.98□□□□□ -2.25
RNF43Q68DV7 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
RNF43Q68DV7 AL590095.2-201ENST00000604136 117 ntBASIC0.98□□□□□ -2.25
RNF43Q68DV7 MIR7110-201ENST00000612638 86 ntBASIC0.98□□□□□ -2.25
RNF43Q68DV7 SNORD114-29-201ENST00000364819 70 ntBASIC0.97□□□□□ -2.25
RNF43Q68DV7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.97□□□□□ -2.25
RNF43Q68DV7 MIR6773-201ENST00000612812 74 ntBASIC0.97□□□□□ -2.25
RNF43Q68DV7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
RNF43Q68DV7 MIR140-201ENST00000385282 100 ntBASIC0.96□□□□□ -2.26
RNF43Q68DV7 SNORA49-201ENST00000386157 136 ntBASIC0.96□□□□□ -2.26
RNF43Q68DV7 RNU7-188P-201ENST00000517063 64 ntBASIC0.96□□□□□ -2.26
RNF43Q68DV7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.96□□□□□ -2.26
RNF43Q68DV7 SNORD115-25-201ENST00000362619 82 ntBASIC0.95□□□□□ -2.26
RNF43Q68DV7 SNORA2A-201ENST00000383885 135 ntBASIC0.95□□□□□ -2.26
RNF43Q68DV7 SNORD2-201ENST00000459163 69 ntBASIC0.95□□□□□ -2.26
RNF43Q68DV7 RNU6-229P-201ENST00000516614 102 ntBASIC0.95□□□□□ -2.26
RNF43Q68DV7 SNORD118-201ENST00000363593 134 ntBASIC0.94□□□□□ -2.26
RNF43Q68DV7 RNA5SP457-201ENST00000363657 124 ntBASIC0.94□□□□□ -2.26
RNF43Q68DV7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.94□□□□□ -2.26
RNF43Q68DV7 RNU6-246P-201ENST00000384702 107 ntBASIC0.93□□□□□ -2.26
RNF43Q68DV7 RNU6-175P-201ENST00000516896 107 ntBASIC0.93□□□□□ -2.26
RNF43Q68DV7 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
RNF43Q68DV7 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
RNF43Q68DV7 Y_RNA.109-201ENST00000363215 102 ntBASIC0.92□□□□□ -2.26
RNF43Q68DV7 RNU4-33P-201ENST00000364316 85 ntBASIC0.92□□□□□ -2.26
RNF43Q68DV7 RNU7-154P-201ENST00000516194 62 ntBASIC0.92□□□□□ -2.26
RNF43Q68DV7 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
RNF43Q68DV7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
RNF43Q68DV7 SNORD1B-201ENST00000363091 84 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 RNU6-810P-201ENST00000364001 107 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 RNU6-35P-201ENST00000384530 107 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
RNF43Q68DV7 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 SNORA40.8-201ENST00000411034 126 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 RNU4-54P-201ENST00000516428 129 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 MIR4677-201ENST00000584153 80 ntBASIC0.91□□□□□ -2.26
RNF43Q68DV7 MIRLET7B-201ENST00000385140 83 ntBASIC0.9□□□□□ -2.27
RNF43Q68DV7 SNORA40B-201ENST00000385573 128 ntBASIC0.9□□□□□ -2.27
RNF43Q68DV7 RNA5SP470-201ENST00000516463 106 ntBASIC0.9□□□□□ -2.27
RNF43Q68DV7 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
RNF43Q68DV7 SNORD114-23-201ENST00000363536 72 ntBASIC0.89□□□□□ -2.27
RNF43Q68DV7 RNU6-1036P-201ENST00000383959 104 ntBASIC0.89□□□□□ -2.27
RNF43Q68DV7 MIR501-201ENST00000390204 84 ntBASIC0.89□□□□□ -2.27
RNF43Q68DV7 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
RNF43Q68DV7 MIR924-201ENST00000638017 53 ntBASIC0.89□□□□□ -2.27
RNF43Q68DV7 RNU6-502P-201ENST00000362419 108 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 RNU6-782P-201ENST00000516852 104 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 MIR548X-201ENST00000580069 75 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 MIR6755-201ENST00000619993 66 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 AC084368.1-201ENST00000620935 65 ntBASIC0.88□□□□□ -2.27
RNF43Q68DV7 SNORD71-201ENST00000411292 86 ntBASIC0.87□□□□□ -2.27
RNF43Q68DV7 AC010487.4-201ENST00000637027 61 ntBASIC0.87□□□□□ -2.27
RNF43Q68DV7 RNU6-458P-201ENST00000384179 107 ntBASIC0.86□□□□□ -2.27
RNF43Q68DV7 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
RNF43Q68DV7 U6.58-201ENST00000613107 107 ntBASIC0.86□□□□□ -2.27
RNF43Q68DV7 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.86□□□□□ -2.27
RNF43Q68DV7 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
RNF43Q68DV7 MIR936-201ENST00000401264 98 ntBASIC0.85□□□□□ -2.27
RNF43Q68DV7 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
RNF43Q68DV7 MIR4490-201ENST00000582647 84 ntBASIC0.85□□□□□ -2.27
RNF43Q68DV7 RN7SL660P-201ENST00000614852 299 ntBASIC0.85□□□□□ -2.27
RNF43Q68DV7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
RNF43Q68DV7 MIR429-201ENST00000362106 83 ntBASIC0.84□□□□□ -2.27
RNF43Q68DV7 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
RNF43Q68DV7 MIR760-201ENST00000390220 80 ntBASIC0.84□□□□□ -2.27
RNF43Q68DV7 RNU6-930P-201ENST00000390938 100 ntBASIC0.84□□□□□ -2.27
RNF43Q68DV7 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
RNF43Q68DV7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.83□□□□□ -2.28
RNF43Q68DV7 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
RNF43Q68DV7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RNF43Q68DV7 MIR579-201ENST00000385221 98 ntBASIC0.81□□□□□ -2.28
RNF43Q68DV7 AC098934.3-201ENST00000430450 190 ntBASIC0.81□□□□□ -2.28
RNF43Q68DV7 MIR3925-201ENST00000584674 77 ntBASIC0.81□□□□□ -2.28
RNF43Q68DV7 AL353803.5-201ENST00000599815 141 ntBASIC0.81□□□□□ -2.28
RNF43Q68DV7 MIR499B-201ENST00000636498 73 ntBASIC0.81□□□□□ -2.28
RNF43Q68DV7 RNU6-598P-201ENST00000364017 105 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 RNU6-848P-201ENST00000515948 107 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 RNU6-617P-201ENST00000516147 107 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 RNU6-473P-201ENST00000516164 107 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.8□□□□□ -2.28
RNF43Q68DV7 AP000676.1-201ENST00000533307 52 ntBASIC0.79□□□□□ -2.28
RNF43Q68DV7 MIR8087-201ENST00000612745 78 ntBASIC0.79□□□□□ -2.28
RNF43Q68DV7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RNF43Q68DV7 RNA5SP257-201ENST00000363023 116 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 RNA5SP128-201ENST00000365305 116 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 U2.18-201ENST00000622185 84 ntBASIC0.78□□□□□ -2.28
RNF43Q68DV7 MIR876-201ENST00000401147 81 ntBASIC0.77□□□□□ -2.29
RNF43Q68DV7 MIR548F3-201ENST00000408509 87 ntBASIC0.77□□□□□ -2.29
RNF43Q68DV7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.77□□□□□ -2.29
RNF43Q68DV7 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms