Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNA5SP147-201ENST00000516493 109 ntBASIC-1.14□□□□□ -2.59
RAB40BQ12829 SNORD116-10-201ENST00000363791 102 ntBASIC-1.15□□□□□ -2.59
RAB40BQ12829 MIR521-2-201ENST00000384818 87 ntBASIC-1.15□□□□□ -2.59
RAB40BQ12829 MIR203A-201ENST00000384836 110 ntBASIC-1.15□□□□□ -2.59
RAB40BQ12829 MIR6509-201ENST00000614603 85 ntBASIC-1.15□□□□□ -2.59
RAB40BQ12829 MIR6874-201ENST00000635894 71 ntBASIC-1.15□□□□□ -2.59
RAB40BQ12829 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.15□□□□□ -2.59
RAB40BQ12829 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
RAB40BQ12829 MIR548AG1-201ENST00000579932 66 ntBASIC-1.16□□□□□ -2.6
RAB40BQ12829 MIR1302-5-201ENST00000408164 150 ntBASIC-1.17□□□□□ -2.6
RAB40BQ12829 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.17□□□□□ -2.6
RAB40BQ12829 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.17□□□□□ -2.6
RAB40BQ12829 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.17□□□□□ -2.6
RAB40BQ12829 MIR6739-201ENST00000622461 75 ntBASIC-1.17□□□□□ -2.6
RAB40BQ12829 MIR409-201ENST00000362237 79 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 AL691482.2-201ENST00000457453 84 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 RNU6-732P-201ENST00000516033 103 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 MIR4796-201ENST00000580742 81 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 U6.81-201ENST00000612550 106 ntBASIC-1.18□□□□□ -2.6
RAB40BQ12829 RNU6-246P-201ENST00000384702 107 ntBASIC-1.19□□□□□ -2.6
RAB40BQ12829 MIR507-201ENST00000385234 94 ntBASIC-1.19□□□□□ -2.6
RAB40BQ12829 RNU7-61P-201ENST00000515897 61 ntBASIC-1.19□□□□□ -2.6
RAB40BQ12829 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
RAB40BQ12829 MIR6129-201ENST00000616087 109 ntBASIC-1.19□□□□□ -2.6
RAB40BQ12829 AL078595.1-201ENST00000404458 226 ntBASIC-1.2□□□□□ -2.6
RAB40BQ12829 AC090616.4-201ENST00000448026 115 ntBASIC-1.2□□□□□ -2.6
RAB40BQ12829 RNU6-226P-201ENST00000363778 107 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 MIR590-201ENST00000385008 97 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 MIR1236-201ENST00000408340 102 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 RNU6-518P-201ENST00000516056 96 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 MIR5683-201ENST00000636514 76 ntBASIC-1.21□□□□□ -2.6
RAB40BQ12829 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 RNA5SP86-201ENST00000390869 98 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 AL021921.1-201ENST00000442774 93 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 RNU6-168P-201ENST00000516189 101 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 U7.5-201ENST00000517224 61 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 RNU6-537P-201ENST00000517277 103 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 MIR3133-201ENST00000583157 78 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.22□□□□□ -2.6
RAB40BQ12829 RNU6-209P-201ENST00000384118 107 ntBASIC-1.23□□□□□ -2.61
RAB40BQ12829 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.23□□□□□ -2.61
RAB40BQ12829 RNA5SP461-201ENST00000516451 104 ntBASIC-1.23□□□□□ -2.61
RAB40BQ12829 RNU6-704P-201ENST00000364162 103 ntBASIC-1.24□□□□□ -2.61
RAB40BQ12829 SNORD57-201ENST00000448188 72 ntBASIC-1.24□□□□□ -2.61
RAB40BQ12829 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.24□□□□□ -2.61
RAB40BQ12829 MIR4490-201ENST00000582647 84 ntBASIC-1.24□□□□□ -2.61
RAB40BQ12829 RNU6-79P-201ENST00000362511 107 ntBASIC-1.25□□□□□ -2.61
RAB40BQ12829 RNU7-88P-201ENST00000458752 63 ntBASIC-1.25□□□□□ -2.61
RAB40BQ12829 RPL35AP4-201ENST00000412007 102 ntBASIC-1.26□□□□□ -2.61
RAB40BQ12829 RNU6-162P-201ENST00000516228 103 ntBASIC-1.26□□□□□ -2.61
RAB40BQ12829 RNU6-752P-201ENST00000516376 102 ntBASIC-1.26□□□□□ -2.61
RAB40BQ12829 RNU6-656P-201ENST00000516785 107 ntBASIC-1.26□□□□□ -2.61
RAB40BQ12829 U2.7-201ENST00000619197 100 ntBASIC-1.26□□□□□ -2.61
RAB40BQ12829 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.27□□□□□ -2.61
RAB40BQ12829 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.27□□□□□ -2.61
RAB40BQ12829 AL450471.1-201ENST00000447509 127 ntBASIC-1.27□□□□□ -2.61
RAB40BQ12829 U7.3-201ENST00000616123 62 ntBASIC-1.27□□□□□ -2.61
RAB40BQ12829 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 RNU6-478P-201ENST00000363904 110 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 RNU6-400P-201ENST00000391173 106 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 RNU6-554P-201ENST00000410466 106 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
RAB40BQ12829 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.28□□□□□ -2.61
RAB40BQ12829 RNA5SP266-201ENST00000410273 108 ntBASIC-1.29□□□□□ -2.62
RAB40BQ12829 AC008267.6-201ENST00000441664 139 ntBASIC-1.29□□□□□ -2.62
RAB40BQ12829 RNU6-109P-201ENST00000516364 107 ntBASIC-1.29□□□□□ -2.62
RAB40BQ12829 RNU6-184P-201ENST00000516514 107 ntBASIC-1.29□□□□□ -2.62
RAB40BQ12829 MIR4320-201ENST00000636981 65 ntBASIC-1.29□□□□□ -2.62
RAB40BQ12829 SNORD115-27-201ENST00000364430 82 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 RNU6-959P-201ENST00000384671 107 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 MIR548H1-201ENST00000408610 102 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 RNU7-153P-201ENST00000516455 62 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 RNU6-807P-201ENST00000516805 107 ntBASIC-1.3□□□□□ -2.62
RAB40BQ12829 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.31□□□□□ -2.62
RAB40BQ12829 RNU6-608P-201ENST00000383927 104 ntBASIC-1.31□□□□□ -2.62
RAB40BQ12829 RNU6-106P-201ENST00000384405 107 ntBASIC-1.31□□□□□ -2.62
RAB40BQ12829 AC018880.2-201ENST00000414265 201 ntBASIC-1.31□□□□□ -2.62
RAB40BQ12829 AL627230.5-201ENST00000619807 58 ntBASIC-1.31□□□□□ -2.62
RAB40BQ12829 RNU6-340P-201ENST00000364005 107 ntBASIC-1.32□□□□□ -2.62
RAB40BQ12829 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.32□□□□□ -2.62
RAB40BQ12829 SNORA19-201ENST00000384737 128 ntBASIC-1.32□□□□□ -2.62
RAB40BQ12829 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.32□□□□□ -2.62
RAB40BQ12829 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.32□□□□□ -2.62
RAB40BQ12829 RNU6-540P-201ENST00000384622 101 ntBASIC-1.33□□□□□ -2.62
RAB40BQ12829 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.33□□□□□ -2.62
RAB40BQ12829 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.34□□□□□ -2.62
RAB40BQ12829 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.34□□□□□ -2.62
RAB40BQ12829 RNU6-681P-201ENST00000364012 104 ntBASIC-1.34□□□□□ -2.62
RAB40BQ12829 MIR548Q-201ENST00000408404 100 ntBASIC-1.34□□□□□ -2.62
RAB40BQ12829 AL035461.1-201ENST00000421490 332 ntBASIC-1.34□□□□□ -2.62
RAB40BQ12829 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms