Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-915P-201ENST00000364943 103 ntBASIC-3.68□□□□□ -3
HIST1H1AQ02539 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.68□□□□□ -3
HIST1H1AQ02539 MIR4760-201ENST00000585040 80 ntBASIC-3.68□□□□□ -3
HIST1H1AQ02539 AC005520.4-201ENST00000604337 90 ntBASIC-3.68□□□□□ -3
HIST1H1AQ02539 SNORD116-4-201ENST00000384733 96 ntBASIC-3.69□□□□□ -3
HIST1H1AQ02539 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.71□□□□□ -3
HIST1H1AQ02539 RNU6-918P-201ENST00000391219 106 ntBASIC-3.71□□□□□ -3
HIST1H1AQ02539 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.72□□□□□ -3
HIST1H1AQ02539 MIR4777-201ENST00000583710 86 ntBASIC-3.72□□□□□ -3
HIST1H1AQ02539 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.73□□□□□ -3.01
HIST1H1AQ02539 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.73□□□□□ -3.01
HIST1H1AQ02539 RNU6-460P-201ENST00000391158 108 ntBASIC-3.73□□□□□ -3.01
HIST1H1AQ02539 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.73□□□□□ -3.01
HIST1H1AQ02539 SNORA27.2-201ENST00000363365 126 ntBASIC-3.74□□□□□ -3.01
HIST1H1AQ02539 AC139792.2-201ENST00000624218 587 ntBASIC-3.74□□□□□ -3.01
HIST1H1AQ02539 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.75□□□□□ -3.01
HIST1H1AQ02539 RNU6-698P-201ENST00000363523 107 ntBASIC-3.75□□□□□ -3.01
HIST1H1AQ02539 RNU6-34P-201ENST00000364874 107 ntBASIC-3.75□□□□□ -3.01
HIST1H1AQ02539 RNU7-197P-201ENST00000458836 62 ntBASIC-3.75□□□□□ -3.01
HIST1H1AQ02539 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.76□□□□□ -3.01
HIST1H1AQ02539 AL158147.1-201ENST00000443970 75 ntBASIC-3.76□□□□□ -3.01
HIST1H1AQ02539 AC025166.1-201ENST00000612411 163 ntBASIC-3.76□□□□□ -3.01
HIST1H1AQ02539 U4.4-201ENST00000620626 117 ntBASIC-3.76□□□□□ -3.01
HIST1H1AQ02539 RNU6-694P-201ENST00000364071 147 ntBASIC-3.77□□□□□ -3.01
HIST1H1AQ02539 RNU6-639P-201ENST00000384074 107 ntBASIC-3.77□□□□□ -3.01
HIST1H1AQ02539 MIR1236-201ENST00000408340 102 ntBASIC-3.77□□□□□ -3.01
HIST1H1AQ02539 MIR369-201ENST00000362155 70 ntBASIC-3.78□□□□□ -3.01
HIST1H1AQ02539 SNORD18C-201ENST00000362704 69 ntBASIC-3.78□□□□□ -3.01
HIST1H1AQ02539 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.78□□□□□ -3.01
HIST1H1AQ02539 SNORD58A-201ENST00000383875 65 ntBASIC-3.78□□□□□ -3.01
HIST1H1AQ02539 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.78□□□□□ -3.01
HIST1H1AQ02539 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.79□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.79□□□□□ -3.02
HIST1H1AQ02539 RNU6-713P-201ENST00000384761 107 ntBASIC-3.79□□□□□ -3.02
HIST1H1AQ02539 RNU6-988P-201ENST00000519081 107 ntBASIC-3.79□□□□□ -3.02
HIST1H1AQ02539 AL035470.1-201ENST00000622571 220 ntBASIC-3.79□□□□□ -3.02
HIST1H1AQ02539 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 RNY3P1-201ENST00000365085 102 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 MIR4679-2-201ENST00000578358 77 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 U6.104-201ENST00000637979 90 ntBASIC-3.8□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.81□□□□□ -3.02
HIST1H1AQ02539 RNY3P8-201ENST00000411366 126 ntBASIC-3.81□□□□□ -3.02
HIST1H1AQ02539 RNU6-795P-201ENST00000516323 103 ntBASIC-3.81□□□□□ -3.02
HIST1H1AQ02539 AC012531.4-201ENST00000616509 177 ntBASIC-3.82□□□□□ -3.02
HIST1H1AQ02539 RNU4-11P-201ENST00000365287 132 ntBASIC-3.83□□□□□ -3.02
HIST1H1AQ02539 SNORD42.2-201ENST00000365570 69 ntBASIC-3.83□□□□□ -3.02
HIST1H1AQ02539 RNU6-995P-201ENST00000391244 107 ntBASIC-3.83□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 SNORD77.2-201ENST00000391045 68 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 RNU6-972P-201ENST00000391208 107 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 MTND2P23-201ENST00000422990 651 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 SNORD63.2-201ENST00000516303 64 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 MIR548V-201ENST00000584165 80 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.84□□□□□ -3.02
HIST1H1AQ02539 RNU7-153P-201ENST00000516455 62 ntBASIC-3.85□□□□□ -3.03
HIST1H1AQ02539 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.85□□□□□ -3.03
HIST1H1AQ02539 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.85□□□□□ -3.03
HIST1H1AQ02539 SNORD116-16-201ENST00000384533 92 ntBASIC-3.86□□□□□ -3.03
HIST1H1AQ02539 SNORD113-3-201ENST00000364830 72 ntBASIC-3.87□□□□□ -3.03
HIST1H1AQ02539 RNU6-669P-201ENST00000365575 107 ntBASIC-3.87□□□□□ -3.03
HIST1H1AQ02539 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.87□□□□□ -3.03
HIST1H1AQ02539 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.87□□□□□ -3.03
HIST1H1AQ02539 SNORD58C-201ENST00000365223 64 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 MIR581-201ENST00000384895 96 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 MIR4680-201ENST00000580906 66 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 AP001340.1-201ENST00000624405 217 ntBASIC-3.88□□□□□ -3.03
HIST1H1AQ02539 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.89□□□□□ -3.03
HIST1H1AQ02539 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.89□□□□□ -3.03
HIST1H1AQ02539 RNU6-887P-201ENST00000410660 100 ntBASIC-3.89□□□□□ -3.03
HIST1H1AQ02539 MIR5009-201ENST00000578736 100 ntBASIC-3.89□□□□□ -3.03
HIST1H1AQ02539 SNORD113-2-201ENST00000391082 72 ntBASIC-3.9□□□□□ -3.03
HIST1H1AQ02539 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.9□□□□□ -3.03
HIST1H1AQ02539 SNORD1B-201ENST00000363091 84 ntBASIC-3.91□□□□□ -3.04
HIST1H1AQ02539 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.91□□□□□ -3.04
HIST1H1AQ02539 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.91□□□□□ -3.04
HIST1H1AQ02539 RNU7-151P-201ENST00000516930 53 ntBASIC-3.91□□□□□ -3.04
HIST1H1AQ02539 RNY1P1-201ENST00000364372 112 ntBASIC-3.92□□□□□ -3.04
HIST1H1AQ02539 RNU6-982P-201ENST00000516216 102 ntBASIC-3.92□□□□□ -3.04
HIST1H1AQ02539 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.92□□□□□ -3.04
HIST1H1AQ02539 RNU6-537P-201ENST00000517277 103 ntBASIC-3.92□□□□□ -3.04
HIST1H1AQ02539 MIR8062-201ENST00000621515 85 ntBASIC-3.92□□□□□ -3.04
HIST1H1AQ02539 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.93□□□□□ -3.04
HIST1H1AQ02539 MIR630-201ENST00000384957 97 ntBASIC-3.93□□□□□ -3.04
HIST1H1AQ02539 SNORD58.1-201ENST00000391313 66 ntBASIC-3.93□□□□□ -3.04
HIST1H1AQ02539 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.93□□□□□ -3.04
HIST1H1AQ02539 RNU6-803P-201ENST00000516034 102 ntBASIC-3.93□□□□□ -3.04
HIST1H1AQ02539 SNORD116-10-201ENST00000363791 102 ntBASIC-3.94□□□□□ -3.04
HIST1H1AQ02539 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.94□□□□□ -3.04
HIST1H1AQ02539 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.95□□□□□ -3.04
HIST1H1AQ02539 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.95□□□□□ -3.04
HIST1H1AQ02539 RNU6-523P-201ENST00000516304 54 ntBASIC-3.95□□□□□ -3.04
HIST1H1AQ02539 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.95□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms