Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR548F4-201ENST00000408515 105 ntBASIC-3.66□□□□□ -3
TPM4P67936 AL450471.1-201ENST00000447509 127 ntBASIC-3.66□□□□□ -3
TPM4P67936 SNORD114-3-201ENST00000364969 75 ntBASIC-3.67□□□□□ -3
TPM4P67936 RNU6-111P-201ENST00000517179 105 ntBASIC-3.67□□□□□ -3
TPM4P67936 MIR3139-201ENST00000579145 76 ntBASIC-3.67□□□□□ -3
TPM4P67936 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.67□□□□□ -3
TPM4P67936 RNU6-340P-201ENST00000364005 107 ntBASIC-3.68□□□□□ -3
TPM4P67936 RNU6-681P-201ENST00000364012 104 ntBASIC-3.68□□□□□ -3
TPM4P67936 SNORD58A-201ENST00000383875 65 ntBASIC-3.68□□□□□ -3
TPM4P67936 MIR548A3-201ENST00000385297 97 ntBASIC-3.68□□□□□ -3
TPM4P67936 RNU7-174P-201ENST00000516248 59 ntBASIC-3.68□□□□□ -3
TPM4P67936 RNU6-795P-201ENST00000516323 103 ntBASIC-3.68□□□□□ -3
TPM4P67936 MIR5009-201ENST00000578736 100 ntBASIC-3.68□□□□□ -3
TPM4P67936 U2.18-201ENST00000622185 84 ntBASIC-3.68□□□□□ -3
TPM4P67936 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.69□□□□□ -3
TPM4P67936 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.69□□□□□ -3
TPM4P67936 MIR548S-201ENST00000581352 82 ntBASIC-3.69□□□□□ -3
TPM4P67936 MIR3170-201ENST00000582699 77 ntBASIC-3.69□□□□□ -3
TPM4P67936 U4.2-201ENST00000618561 85 ntBASIC-3.69□□□□□ -3
TPM4P67936 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.7□□□□□ -3
TPM4P67936 SNORD115-31-201ENST00000365318 82 ntBASIC-3.7□□□□□ -3
TPM4P67936 AC012531.4-201ENST00000616509 177 ntBASIC-3.7□□□□□ -3
TPM4P67936 RNU6-766P-201ENST00000362478 107 ntBASIC-3.71□□□□□ -3
TPM4P67936 RNU6-972P-201ENST00000391208 107 ntBASIC-3.71□□□□□ -3
TPM4P67936 AL035461.1-201ENST00000421490 332 ntBASIC-3.71□□□□□ -3
TPM4P67936 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.71□□□□□ -3
TPM4P67936 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.71□□□□□ -3
TPM4P67936 MIR3144-201ENST00000579460 79 ntBASIC-3.71□□□□□ -3
TPM4P67936 MIR3128-201ENST00000581957 66 ntBASIC-3.71□□□□□ -3
TPM4P67936 MIR548W-201ENST00000581970 74 ntBASIC-3.71□□□□□ -3
TPM4P67936 MIR429-201ENST00000362106 83 ntBASIC-3.72□□□□□ -3
TPM4P67936 RNU6-645P-201ENST00000364649 106 ntBASIC-3.72□□□□□ -3
TPM4P67936 MIR1236-201ENST00000408340 102 ntBASIC-3.72□□□□□ -3
TPM4P67936 Y_RNA.644-201ENST00000459006 113 ntBASIC-3.72□□□□□ -3
TPM4P67936 RNU6-682P-201ENST00000363843 106 ntBASIC-3.73□□□□□ -3.01
TPM4P67936 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.73□□□□□ -3.01
TPM4P67936 MIR548C-201ENST00000384815 97 ntBASIC-3.73□□□□□ -3.01
TPM4P67936 RNU6-587P-201ENST00000391282 106 ntBASIC-3.73□□□□□ -3.01
TPM4P67936 RNU6-861P-201ENST00000516745 106 ntBASIC-3.74□□□□□ -3.01
TPM4P67936 AC013734.1-201ENST00000619329 111 ntBASIC-3.74□□□□□ -3.01
TPM4P67936 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.74□□□□□ -3.01
TPM4P67936 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.75□□□□□ -3.01
TPM4P67936 RNY4P27-201ENST00000363341 96 ntBASIC-3.75□□□□□ -3.01
TPM4P67936 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.75□□□□□ -3.01
TPM4P67936 MIR548X2-201ENST00000579776 100 ntBASIC-3.75□□□□□ -3.01
TPM4P67936 RNU6-887P-201ENST00000410660 100 ntBASIC-3.76□□□□□ -3.01
TPM4P67936 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.77□□□□□ -3.01
TPM4P67936 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.77□□□□□ -3.01
TPM4P67936 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.77□□□□□ -3.01
TPM4P67936 snoU13.10-201ENST00000459301 103 ntBASIC-3.77□□□□□ -3.01
TPM4P67936 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.78□□□□□ -3.01
TPM4P67936 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.79□□□□□ -3.02
TPM4P67936 SNORA20.1-201ENST00000364790 130 ntBASIC-3.8□□□□□ -3.02
TPM4P67936 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.8□□□□□ -3.02
TPM4P67936 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.8□□□□□ -3.02
TPM4P67936 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.8□□□□□ -3.02
TPM4P67936 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.81□□□□□ -3.02
TPM4P67936 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.81□□□□□ -3.02
TPM4P67936 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.81□□□□□ -3.02
TPM4P67936 AC005520.4-201ENST00000604337 90 ntBASIC-3.81□□□□□ -3.02
TPM4P67936 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 SNORD116-10-201ENST00000363791 102 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 MTCYBP6-201ENST00000441810 138 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 AL117187.1-201ENST00000555482 181 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 MIR4748-201ENST00000578076 82 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 MIR466-201ENST00000580653 84 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 U4.4-201ENST00000620626 117 ntBASIC-3.82□□□□□ -3.02
TPM4P67936 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.83□□□□□ -3.02
TPM4P67936 RNY3P14-201ENST00000384309 102 ntBASIC-3.83□□□□□ -3.02
TPM4P67936 MT-TM-201ENST00000387377 68 ntBASIC-3.83□□□□□ -3.02
TPM4P67936 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.83□□□□□ -3.02
TPM4P67936 RNU6-772P-201ENST00000516042 105 ntBASIC-3.84□□□□□ -3.02
TPM4P67936 AL157777.2-201ENST00000258070 137 ntBASIC-3.85□□□□□ -3.03
TPM4P67936 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.85□□□□□ -3.03
TPM4P67936 SNORD116-18-201ENST00000383961 92 ntBASIC-3.86□□□□□ -3.03
TPM4P67936 SNORD77.2-201ENST00000391045 68 ntBASIC-3.86□□□□□ -3.03
TPM4P67936 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.86□□□□□ -3.03
TPM4P67936 RNU6-537P-201ENST00000517277 103 ntBASIC-3.86□□□□□ -3.03
TPM4P67936 U6.97-201ENST00000636904 101 ntBASIC-3.86□□□□□ -3.03
TPM4P67936 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.87□□□□□ -3.03
TPM4P67936 RNU7-153P-201ENST00000516455 62 ntBASIC-3.87□□□□□ -3.03
TPM4P67936 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.87□□□□□ -3.03
TPM4P67936 RNU6-119P-201ENST00000364882 107 ntBASIC-3.88□□□□□ -3.03
TPM4P67936 MIR548AA1-201ENST00000384971 97 ntBASIC-3.88□□□□□ -3.03
TPM4P67936 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.88□□□□□ -3.03
TPM4P67936 SCARNA23-201ENST00000516060 130 ntBASIC-3.89□□□□□ -3.03
TPM4P67936 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.89□□□□□ -3.03
TPM4P67936 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.9□□□□□ -3.03
TPM4P67936 RNU6-247P-201ENST00000362636 107 ntBASIC-3.91□□□□□ -3.04
TPM4P67936 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.91□□□□□ -3.04
TPM4P67936 MIR569-201ENST00000385228 96 ntBASIC-3.91□□□□□ -3.04
TPM4P67936 AC062037.2-201ENST00000610137 73 ntBASIC-3.91□□□□□ -3.04
TPM4P67936 RNU6-698P-201ENST00000363523 107 ntBASIC-3.92□□□□□ -3.04
TPM4P67936 RNU6-34P-201ENST00000364874 107 ntBASIC-3.92□□□□□ -3.04
TPM4P67936 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.92□□□□□ -3.04
TPM4P67936 RNU7-120P-201ENST00000459334 63 ntBASIC-3.92□□□□□ -3.04
TPM4P67936 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.93□□□□□ -3.04
TPM4P67936 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.94□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms