Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNU6-1204P-201ENST00000363948 107 ntBASIC1.17□□□□□ -2.22
CHRNA4P43681 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
CHRNA4P43681 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
CHRNA4P43681 SNORD99-201ENST00000408612 74 ntBASIC1.16□□□□□ -2.22
CHRNA4P43681 MIR548AA1-201ENST00000384971 97 ntBASIC1.15□□□□□ -2.23
CHRNA4P43681 RNU6-782P-201ENST00000516852 104 ntBASIC1.15□□□□□ -2.23
CHRNA4P43681 RNU6-175P-201ENST00000516896 107 ntBASIC1.15□□□□□ -2.23
CHRNA4P43681 RNU7-188P-201ENST00000517063 64 ntBASIC1.15□□□□□ -2.23
CHRNA4P43681 U6.103-201ENST00000637085 61 ntBASIC1.15□□□□□ -2.23
CHRNA4P43681 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
CHRNA4P43681 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
CHRNA4P43681 RNU6-995P-201ENST00000391244 107 ntBASIC1.14□□□□□ -2.23
CHRNA4P43681 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.14□□□□□ -2.23
CHRNA4P43681 PVT1_3.1-201ENST00000620853 95 ntBASIC1.14□□□□□ -2.23
CHRNA4P43681 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CHRNA4P43681 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 RNU6-822P-201ENST00000362707 106 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 RNU6-945P-201ENST00000383947 107 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 RNU6-1262P-201ENST00000516217 96 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
CHRNA4P43681 AL353803.5-201ENST00000599815 141 ntBASIC1.12□□□□□ -2.23
CHRNA4P43681 U7.6-201ENST00000610841 64 ntBASIC1.12□□□□□ -2.23
CHRNA4P43681 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
CHRNA4P43681 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CHRNA4P43681 RNU6-742P-201ENST00000365289 107 ntBASIC1.11□□□□□ -2.23
CHRNA4P43681 SNORD115-23-201ENST00000364461 82 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 RNU6-721P-201ENST00000410155 105 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 AC069271.1-201ENST00000445577 156 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CHRNA4P43681 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.1□□□□□ -2.23
CHRNA4P43681 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
CHRNA4P43681 Y_RNA.139-201ENST00000363464 102 ntBASIC1.09□□□□□ -2.23
CHRNA4P43681 SNORD45.2-201ENST00000363552 72 ntBASIC1.09□□□□□ -2.23
CHRNA4P43681 RNU6-1267P-201ENST00000410747 107 ntBASIC1.09□□□□□ -2.23
CHRNA4P43681 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHRNA4P43681 RNU6-1036P-201ENST00000383959 104 ntBASIC1.08□□□□□ -2.24
CHRNA4P43681 MIR29B1-201ENST00000385015 81 ntBASIC1.08□□□□□ -2.24
CHRNA4P43681 SNORD57-201ENST00000448188 72 ntBASIC1.08□□□□□ -2.24
CHRNA4P43681 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
CHRNA4P43681 RNA5SP517-201ENST00000364724 117 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 SNORA2A-201ENST00000383885 135 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
CHRNA4P43681 Y_RNA.698-201ENST00000516798 118 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 MIR4677-201ENST00000584153 80 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 AC108676.2-201ENST00000605225 163 ntBASIC1.07□□□□□ -2.24
CHRNA4P43681 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CHRNA4P43681 MIR4432-201ENST00000581823 84 ntBASIC1.06□□□□□ -2.24
CHRNA4P43681 Y_RNA.374-201ENST00000365606 101 ntBASIC1.05□□□□□ -2.24
CHRNA4P43681 RNU6-229P-201ENST00000516614 102 ntBASIC1.05□□□□□ -2.24
CHRNA4P43681 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
CHRNA4P43681 MTRNR2L9-201ENST00000622562 75 ntBASIC1.05□□□□□ -2.24
CHRNA4P43681 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CHRNA4P43681 RNU6-59P-201ENST00000384787 107 ntBASIC1.04□□□□□ -2.24
CHRNA4P43681 MIR501-201ENST00000390204 84 ntBASIC1.04□□□□□ -2.24
CHRNA4P43681 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 RNU6-974P-201ENST00000384099 108 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 MIR548H4-201ENST00000408689 111 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 AC098934.3-201ENST00000430450 190 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 SNORA25.18-201ENST00000607153 114 ntBASIC1.03□□□□□ -2.24
CHRNA4P43681 SNORD118-201ENST00000363593 134 ntBASIC1.02□□□□□ -2.25
CHRNA4P43681 RNU6-1232P-201ENST00000516299 86 ntBASIC1.02□□□□□ -2.25
CHRNA4P43681 U7.5-201ENST00000517224 61 ntBASIC1.02□□□□□ -2.25
CHRNA4P43681 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
CHRNA4P43681 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
CHRNA4P43681 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
CHRNA4P43681 RN7SL660P-201ENST00000614852 299 ntBASIC1.01□□□□□ -2.25
CHRNA4P43681 AC084368.1-201ENST00000620935 65 ntBASIC1.01□□□□□ -2.25
CHRNA4P43681 MIR140-201ENST00000385282 100 ntBASIC1□□□□□ -2.25
CHRNA4P43681 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1□□□□□ -2.25
CHRNA4P43681 RNU6-848P-201ENST00000515948 107 ntBASIC1□□□□□ -2.25
CHRNA4P43681 RNU6-617P-201ENST00000516147 107 ntBASIC1□□□□□ -2.25
CHRNA4P43681 RNU6-473P-201ENST00000516164 107 ntBASIC1□□□□□ -2.25
CHRNA4P43681 SNORD63.1-201ENST00000516178 80 ntBASIC1□□□□□ -2.25
CHRNA4P43681 RNU6-1049P-201ENST00000516414 107 ntBASIC1□□□□□ -2.25
CHRNA4P43681 RNU6-1174P-201ENST00000517278 101 ntBASIC1□□□□□ -2.25
CHRNA4P43681 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
CHRNA4P43681 Y_RNA.423-201ENST00000384057 113 ntBASIC0.99□□□□□ -2.25
CHRNA4P43681 RNU6-1008P-201ENST00000384160 104 ntBASIC0.99□□□□□ -2.25
CHRNA4P43681 MIR876-201ENST00000401147 81 ntBASIC0.99□□□□□ -2.25
CHRNA4P43681 MIR4464-201ENST00000580818 92 ntBASIC0.99□□□□□ -2.25
CHRNA4P43681 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
CHRNA4P43681 SNORA40.8-201ENST00000411034 126 ntBASIC0.98□□□□□ -2.25
CHRNA4P43681 RNU7-88P-201ENST00000458752 63 ntBASIC0.98□□□□□ -2.25
CHRNA4P43681 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
CHRNA4P43681 Y_RNA.321-201ENST00000365149 102 ntBASIC0.97□□□□□ -2.25
CHRNA4P43681 MIR106A-201ENST00000384870 81 ntBASIC0.97□□□□□ -2.25
CHRNA4P43681 MIR6755-201ENST00000619993 66 ntBASIC0.97□□□□□ -2.25
CHRNA4P43681 MIR6888-201ENST00000621977 67 ntBASIC0.97□□□□□ -2.25
CHRNA4P43681 SNORD63.2-201ENST00000516303 64 ntBASIC0.96□□□□□ -2.26
CHRNA4P43681 AP000676.1-201ENST00000533307 52 ntBASIC0.96□□□□□ -2.26
CHRNA4P43681 MIR3170-201ENST00000582699 77 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 309.4 ms