Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR664B-201ENST00000626756 61 ntBASIC-1.76□□□□□ -2.69
RFC3P40938 RNU6-574P-201ENST00000384265 107 ntBASIC-1.77□□□□□ -2.69
RFC3P40938 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.77□□□□□ -2.69
RFC3P40938 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.77□□□□□ -2.69
RFC3P40938 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.77□□□□□ -2.69
RFC3P40938 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.77□□□□□ -2.69
RFC3P40938 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 MIR519A2-201ENST00000384990 87 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 MTND4LP9-201ENST00000427694 174 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 RNU7-154P-201ENST00000516194 62 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 RNU6-426P-201ENST00000516464 97 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 MIR4490-201ENST00000582647 84 ntBASIC-1.78□□□□□ -2.69
RFC3P40938 RNU6-379P-201ENST00000363813 104 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 RNU6-119P-201ENST00000364882 107 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 MIR521-2-201ENST00000384818 87 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 RPL35AP4-201ENST00000412007 102 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 RNU6-518P-201ENST00000516056 96 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 RNU6-980P-201ENST00000516925 103 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 AP002795.1-201ENST00000534879 84 ntBASIC-1.79□□□□□ -2.7
RFC3P40938 SNORD115-27-201ENST00000364430 82 ntBASIC-1.8□□□□□ -2.7
RFC3P40938 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.8□□□□□ -2.7
RFC3P40938 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.8□□□□□ -2.7
RFC3P40938 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.8□□□□□ -2.7
RFC3P40938 MIR5683-201ENST00000636514 76 ntBASIC-1.8□□□□□ -2.7
RFC3P40938 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.81□□□□□ -2.7
RFC3P40938 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.81□□□□□ -2.7
RFC3P40938 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 RNU6-463P-201ENST00000384340 107 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 RNU7-88P-201ENST00000458752 63 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 RNU6-795P-201ENST00000516323 103 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 MIR3139-201ENST00000579145 76 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.82□□□□□ -2.7
RFC3P40938 U6.81-201ENST00000612550 106 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 AC012531.4-201ENST00000616509 177 ntBASIC-1.82□□□□□ -2.7
RFC3P40938 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.83□□□□□ -2.7
RFC3P40938 SNORA19.1-201ENST00000410656 129 ntBASIC-1.83□□□□□ -2.7
RFC3P40938 AC090616.4-201ENST00000448026 115 ntBASIC-1.83□□□□□ -2.7
RFC3P40938 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.83□□□□□ -2.7
RFC3P40938 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.83□□□□□ -2.7
RFC3P40938 SNORD58A-201ENST00000383875 65 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 SNORD19-201ENST00000391191 68 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 RNU6-972P-201ENST00000391208 107 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 RNU6-168P-201ENST00000516189 101 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 RNU6-388P-201ENST00000517012 105 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 RNU6-389P-201ENST00000517048 105 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 MTND5P41-201ENST00000517498 206 ntBASIC-1.84□□□□□ -2.7
RFC3P40938 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.85□□□□□ -2.71
RFC3P40938 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.85□□□□□ -2.71
RFC3P40938 SNORA40-201ENST00000388090 126 ntBASIC-1.85□□□□□ -2.71
RFC3P40938 AL353621.2-201ENST00000605340 133 ntBASIC-1.85□□□□□ -2.71
RFC3P40938 RNU7-107P-201ENST00000459121 61 ntBASIC-1.86□□□□□ -2.71
RFC3P40938 U7.5-201ENST00000517224 61 ntBASIC-1.86□□□□□ -2.71
RFC3P40938 MIR6739-201ENST00000622461 75 ntBASIC-1.86□□□□□ -2.71
RFC3P40938 MIR3914-2-201ENST00000637339 95 ntBASIC-1.86□□□□□ -2.71
RFC3P40938 RNA5SP405-201ENST00000363059 114 ntBASIC-1.87□□□□□ -2.71
RFC3P40938 MIR4796-201ENST00000580742 81 ntBASIC-1.87□□□□□ -2.71
RFC3P40938 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 RNU6-887P-201ENST00000410660 100 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 AC018880.2-201ENST00000414265 201 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 AL021921.1-201ENST00000442774 93 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 RNU6-752P-201ENST00000516376 102 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.88□□□□□ -2.71
RFC3P40938 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.89□□□□□ -2.71
RFC3P40938 RNU6-694P-201ENST00000364071 147 ntBASIC-1.89□□□□□ -2.71
RFC3P40938 MT-TM-201ENST00000387377 68 ntBASIC-1.89□□□□□ -2.71
RFC3P40938 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.89□□□□□ -2.71
RFC3P40938 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.89□□□□□ -2.71
RFC3P40938 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 MT-TG-201ENST00000387429 68 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 RNU6-400P-201ENST00000391173 106 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 MIR548Q-201ENST00000408404 100 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 SCARNA23-201ENST00000516060 130 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 RNU6-182P-201ENST00000516970 105 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.9□□□□□ -2.71
RFC3P40938 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
RFC3P40938 RNU6-774P-201ENST00000363238 107 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 SNORD116-10-201ENST00000363791 102 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 MIR548A3-201ENST00000385297 97 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 RNU6-257P-201ENST00000410238 98 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 SNORD33.1-201ENST00000516213 88 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 U6.95-201ENST00000636931 70 ntBASIC-1.91□□□□□ -2.72
RFC3P40938 RNU6-246P-201ENST00000384702 107 ntBASIC-1.92□□□□□ -2.72
RFC3P40938 MIR548AG1-201ENST00000579932 66 ntBASIC-1.92□□□□□ -2.72
RFC3P40938 RNU6-194P-201ENST00000363862 105 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 MIR1236-201ENST00000408340 102 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 RNU6-904P-201ENST00000516206 101 ntBASIC-1.93□□□□□ -2.72
RFC3P40938 SNORD54-201ENST00000459159 67 ntBASIC-1.94□□□□□ -2.72
RFC3P40938 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.94□□□□□ -2.72
RFC3P40938 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.95□□□□□ -2.72
RFC3P40938 RNU6-886P-201ENST00000384319 105 ntBASIC-1.95□□□□□ -2.72
RFC3P40938 RNU6-79P-201ENST00000362511 107 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 235.1 ms