Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 Y_RNA.433-201ENST00000384089 102 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 SNORA15B-1-201ENST00000384334 135 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 Y_RNA.633-201ENST00000459107 95 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 RNU6-92P-201ENST00000605893 104 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 U2.7-201ENST00000619197 100 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 MIR517B-201ENST00000385102 67 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 RNU6-1232P-201ENST00000516299 86 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 RNU1-29P-201ENST00000606574 126 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 AC090617.8-201ENST00000623339 167 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 U6.96-201ENST00000636425 70 ntBASIC0.45□□□□□ -2.34
HOXC13P31276 RNU6-302P-201ENST00000365249 107 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 MIR516B1-201ENST00000385211 90 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 RNU7-174P-201ENST00000516248 59 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 CYP3A54P-201ENST00000566950 75 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 U4.4-201ENST00000620626 117 ntBASIC0.44□□□□□ -2.34
HOXC13P31276 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
HOXC13P31276 SNORD60.1-201ENST00000362451 73 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 RNU6-446P-201ENST00000362827 106 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 Y_RNA.325-201ENST00000365171 122 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 RNU6-1246P-201ENST00000391064 107 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 SNORD113-2-201ENST00000391082 72 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 MIR5706-201ENST00000579841 80 ntBASIC0.43□□□□□ -2.34
HOXC13P31276 SNORA9.1-201ENST00000362412 131 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 RNU6-698P-201ENST00000363523 107 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 Y_RNA.236-201ENST00000364427 111 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 RNU6-34P-201ENST00000364874 107 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 SNORA2A-201ENST00000383885 135 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 RNU6-122P-201ENST00000516818 107 ntBASIC0.42□□□□□ -2.34
HOXC13P31276 MIR20A-201ENST00000362279 71 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 Y_RNA.246-201ENST00000364495 108 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 MIR1255B2-201ENST00000408618 67 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 RNU6-518P-201ENST00000516056 96 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 RNU7-188P-201ENST00000517063 64 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 MIR3938-201ENST00000582157 103 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 MIR6718-201ENST00000616153 80 ntBASIC0.41□□□□□ -2.34
HOXC13P31276 SNORA41B-201ENST00000384785 128 ntBASIC0.4□□□□□ -2.35
HOXC13P31276 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
HOXC13P31276 AC244090.1-201ENST00000441884 93 ntBASIC0.4□□□□□ -2.35
HOXC13P31276 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HOXC13P31276 SNORD113-4-201ENST00000364802 75 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 SNORD114-29-201ENST00000364819 70 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 MIR519A2-201ENST00000384990 87 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 RNU6-141P-201ENST00000410499 105 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 MIR499B-201ENST00000636498 73 ntBASIC0.39□□□□□ -2.35
HOXC13P31276 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
HOXC13P31276 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 MIR760-201ENST00000390220 80 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 RNU6-337P-201ENST00000391243 106 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 RNU7-129P-201ENST00000516128 62 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 RNU6-175P-201ENST00000516896 107 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 MIR7978-201ENST00000636158 59 ntBASIC0.38□□□□□ -2.35
HOXC13P31276 RNU6-1312P-201ENST00000362425 108 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 RNU6-1036P-201ENST00000383959 104 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 SNORA49-201ENST00000386157 136 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 AL021921.1-201ENST00000442774 93 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
HOXC13P31276 MIR548AG1-201ENST00000579932 66 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 MIR4677-201ENST00000584153 80 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 U7.6-201ENST00000610841 64 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 MIR6773-201ENST00000612812 74 ntBASIC0.37□□□□□ -2.35
HOXC13P31276 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
HOXC13P31276 MIR527-201ENST00000385244 85 ntBASIC0.36□□□□□ -2.35
HOXC13P31276 RN7SL660P-201ENST00000614852 299 ntBASIC0.36□□□□□ -2.35
HOXC13P31276 RNU6-936P-201ENST00000384005 107 ntBASIC0.35□□□□□ -2.35
HOXC13P31276 RNU6-782P-201ENST00000516852 104 ntBASIC0.35□□□□□ -2.35
HOXC13P31276 MIR3925-201ENST00000584674 77 ntBASIC0.35□□□□□ -2.35
HOXC13P31276 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
HOXC13P31276 SNORD115-25-201ENST00000362619 82 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 Y_RNA.74-201ENST00000362911 99 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 Y_RNA.282-201ENST00000364793 102 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 RNA5SP128-201ENST00000365305 116 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 RNU6-35P-201ENST00000384530 107 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 Y_RNA.722-201ENST00000517279 114 ntBASIC0.34□□□□□ -2.36
HOXC13P31276 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 SNORD116.2-201ENST00000391251 93 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 SNORD2-201ENST00000459163 69 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 AP000676.1-201ENST00000533307 52 ntBASIC0.33□□□□□ -2.36
HOXC13P31276 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 RNU6-502P-201ENST00000362419 108 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 SNORD116-16-201ENST00000384533 92 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 MIRLET7B-201ENST00000385140 83 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 RNU6-231P-201ENST00000517122 103 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 SCARNA11.2-201ENST00000517183 154 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
HOXC13P31276 Y_RNA.109-201ENST00000363215 102 ntBASIC0.31□□□□□ -2.36
HOXC13P31276 HAR1A.1-201ENST00000459583 118 ntBASIC0.31□□□□□ -2.36
HOXC13P31276 RNU6-1184P-201ENST00000384588 108 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms