Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.06□□□□□ -2.24
HOXA10P31260 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXA10P31260 SNORD2-201ENST00000459163 69 ntBASIC1.06□□□□□ -2.24
HOXA10P31260 RNU6-518P-201ENST00000516056 96 ntBASIC1.06□□□□□ -2.24
HOXA10P31260 RNU1-29P-201ENST00000606574 126 ntBASIC1.06□□□□□ -2.24
HOXA10P31260 MIR4714-201ENST00000580728 77 ntBASIC1.05□□□□□ -2.24
HOXA10P31260 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
HOXA10P31260 Y_RNA.282-201ENST00000364793 102 ntBASIC1.04□□□□□ -2.24
HOXA10P31260 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
HOXA10P31260 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HOXA10P31260 MIR330-201ENST00000362196 94 ntBASIC1.03□□□□□ -2.24
HOXA10P31260 MIR519A2-201ENST00000384990 87 ntBASIC1.03□□□□□ -2.24
HOXA10P31260 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
HOXA10P31260 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXA10P31260 VTRNA1-3-201ENST00000365645 89 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 MIR1255B2-201ENST00000408618 67 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 SNORA40.16-201ENST00000517238 121 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 MIR4752-201ENST00000579672 72 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 MIR7110-201ENST00000612638 86 ntBASIC1.02□□□□□ -2.25
HOXA10P31260 RNU7-154P-201ENST00000516194 62 ntBASIC1.01□□□□□ -2.25
HOXA10P31260 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
HOXA10P31260 MIR6513-201ENST00000621188 64 ntBASIC1.01□□□□□ -2.25
HOXA10P31260 RNU4-33P-201ENST00000364316 85 ntBASIC1□□□□□ -2.25
HOXA10P31260 MIR527-201ENST00000385244 85 ntBASIC1□□□□□ -2.25
HOXA10P31260 RNU6-337P-201ENST00000391243 106 ntBASIC1□□□□□ -2.25
HOXA10P31260 SNORD114-29-201ENST00000364819 70 ntBASIC0.99□□□□□ -2.25
HOXA10P31260 SNORD116.2-201ENST00000391251 93 ntBASIC0.99□□□□□ -2.25
HOXA10P31260 RNA5SP222-201ENST00000411039 105 ntBASIC0.99□□□□□ -2.25
HOXA10P31260 U7.6-201ENST00000610841 64 ntBASIC0.99□□□□□ -2.25
HOXA10P31260 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.99□□□□□ -2.25
HOXA10P31260 RNU6-246P-201ENST00000384702 107 ntBASIC0.98□□□□□ -2.25
HOXA10P31260 RNU6-351P-201ENST00000516097 100 ntBASIC0.98□□□□□ -2.25
HOXA10P31260 RNA5SP470-201ENST00000516463 106 ntBASIC0.98□□□□□ -2.25
HOXA10P31260 MIR548X-201ENST00000580069 75 ntBASIC0.98□□□□□ -2.25
HOXA10P31260 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
HOXA10P31260 SNORA40B-201ENST00000385573 128 ntBASIC0.97□□□□□ -2.25
HOXA10P31260 MIR936-201ENST00000401264 98 ntBASIC0.97□□□□□ -2.25
HOXA10P31260 MIR1197-201ENST00000408818 88 ntBASIC0.97□□□□□ -2.25
HOXA10P31260 MIR6773-201ENST00000612812 74 ntBASIC0.97□□□□□ -2.25
HOXA10P31260 SNORD115-25-201ENST00000362619 82 ntBASIC0.96□□□□□ -2.26
HOXA10P31260 SNORA49-201ENST00000386157 136 ntBASIC0.96□□□□□ -2.26
HOXA10P31260 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HOXA10P31260 AC069271.1-201ENST00000445577 156 ntBASIC0.96□□□□□ -2.26
HOXA10P31260 SNORD118-201ENST00000363593 134 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 RNU6-848P-201ENST00000515948 107 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 RNU6-617P-201ENST00000516147 107 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 RNU6-473P-201ENST00000516164 107 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 RNU6-1049P-201ENST00000516414 107 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 MIR6835-201ENST00000621552 64 ntBASIC0.95□□□□□ -2.26
HOXA10P31260 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
HOXA10P31260 SNORA2A-201ENST00000383885 135 ntBASIC0.94□□□□□ -2.26
HOXA10P31260 RNA5SP285-201ENST00000516619 119 ntBASIC0.94□□□□□ -2.26
HOXA10P31260 MIR548AG1-201ENST00000579932 66 ntBASIC0.94□□□□□ -2.26
HOXA10P31260 MIR429-201ENST00000362106 83 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 SNORD1B-201ENST00000363091 84 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 MIRLET7B-201ENST00000385140 83 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 MIR140-201ENST00000385282 100 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 RNU6-175P-201ENST00000516896 107 ntBASIC0.93□□□□□ -2.26
HOXA10P31260 RNU6-930P-201ENST00000390938 100 ntBASIC0.92□□□□□ -2.26
HOXA10P31260 RNU7-188P-201ENST00000517063 64 ntBASIC0.92□□□□□ -2.26
HOXA10P31260 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
HOXA10P31260 Y_RNA.109-201ENST00000363215 102 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 RNU6-810P-201ENST00000364001 107 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 RNY1P8-201ENST00000383970 114 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
HOXA10P31260 RNU6-502P-201ENST00000362419 108 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 MIR508-201ENST00000384857 115 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 MIR548F3-201ENST00000408509 87 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 RNA5SP193-201ENST00000410353 107 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 SNORA40.8-201ENST00000411034 126 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 RNU6-229P-201ENST00000516614 102 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 SNORA25.18-201ENST00000607153 114 ntBASIC0.9□□□□□ -2.27
HOXA10P31260 MIR4677-201ENST00000584153 80 ntBASIC0.89□□□□□ -2.27
HOXA10P31260 RNU6-458P-201ENST00000384179 107 ntBASIC0.88□□□□□ -2.27
HOXA10P31260 U6.58-201ENST00000613107 107 ntBASIC0.88□□□□□ -2.27
HOXA10P31260 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.88□□□□□ -2.27
HOXA10P31260 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
HOXA10P31260 MIR501-201ENST00000390204 84 ntBASIC0.87□□□□□ -2.27
HOXA10P31260 snoU13.19-201ENST00000459148 104 ntBASIC0.87□□□□□ -2.27
HOXA10P31260 RNU6-1232P-201ENST00000516299 86 ntBASIC0.87□□□□□ -2.27
HOXA10P31260 RNU6-419P-201ENST00000517030 63 ntBASIC0.87□□□□□ -2.27
HOXA10P31260 MIR4490-201ENST00000582647 84 ntBASIC0.87□□□□□ -2.27
HOXA10P31260 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.87□□□□□ -2.27
HOXA10P31260 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
HOXA10P31260 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
HOXA10P31260 RNU6-782P-201ENST00000516852 104 ntBASIC0.86□□□□□ -2.27
HOXA10P31260 MIR4711-201ENST00000578274 70 ntBASIC0.86□□□□□ -2.27
HOXA10P31260 RNU6-838P-201ENST00000363399 108 ntBASIC0.85□□□□□ -2.27
HOXA10P31260 RNU6-1036P-201ENST00000383959 104 ntBASIC0.85□□□□□ -2.27
HOXA10P31260 Y_RNA.423-201ENST00000384057 113 ntBASIC0.85□□□□□ -2.27
HOXA10P31260 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
HOXA10P31260 MIR6755-201ENST00000619993 66 ntBASIC0.85□□□□□ -2.27
HOXA10P31260 RNU7-160P-201ENST00000516660 62 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms