Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.02□□□□□ -2.41
SHC1P29353 RNU6-24P-201ENST00000384440 107 ntBASIC-0.02□□□□□ -2.41
SHC1P29353 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
SHC1P29353 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.02□□□□□ -2.41
SHC1P29353 RNU6-70P-201ENST00000516438 60 ntBASIC-0.02□□□□□ -2.41
SHC1P29353 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
SHC1P29353 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 SNORD115-22-201ENST00000364456 82 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 MIR521-2-201ENST00000384818 87 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 RNU6-604P-201ENST00000390917 100 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 AC244250.2-201ENST00000418731 148 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 RNU6-656P-201ENST00000516785 107 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 MIR6773-201ENST00000612812 74 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 U6.96-201ENST00000636425 70 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
SHC1P29353 RNU6-982P-201ENST00000516216 102 ntBASIC-0.04□□□□□ -2.42
SHC1P29353 U7.4-201ENST00000614961 63 ntBASIC-0.04□□□□□ -2.42
SHC1P29353 RNU6-881P-201ENST00000516813 102 ntBASIC-0.05□□□□□ -2.42
SHC1P29353 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.05□□□□□ -2.42
SHC1P29353 RNA5SP257-201ENST00000363023 116 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 RNU6-645P-201ENST00000364649 106 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 SNORD45A-201ENST00000384512 84 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 MIR9-2-201ENST00000384838 87 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SHC1P29353 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 CYP3A54P-201ENST00000566950 75 ntBASIC-0.06□□□□□ -2.42
SHC1P29353 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 RNU6-455P-201ENST00000384681 107 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 MIRLET7B-201ENST00000385140 83 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 MIR889-201ENST00000401280 79 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 RNU6-523P-201ENST00000516304 54 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 RNU6-687P-201ENST00000516443 89 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
SHC1P29353 SNORD113.1-201ENST00000363280 73 ntBASIC-0.08□□□□□ -2.42
SHC1P29353 RNU6-900P-201ENST00000384498 102 ntBASIC-0.08□□□□□ -2.42
SHC1P29353 SNORD115-31-201ENST00000365318 82 ntBASIC-0.09□□□□□ -2.42
SHC1P29353 RNU6-587P-201ENST00000391282 106 ntBASIC-0.09□□□□□ -2.42
SHC1P29353 RNU7-55P-201ENST00000459426 62 ntBASIC-0.09□□□□□ -2.42
SHC1P29353 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.09□□□□□ -2.42
SHC1P29353 MIR8053-201ENST00000613344 75 ntBASIC-0.09□□□□□ -2.42
SHC1P29353 uc_338.36-201ENST00000622331 158 ntBASIC-0.09□□□□□ -2.42
SHC1P29353 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
SHC1P29353 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
SHC1P29353 MIR1255B2-201ENST00000408618 67 ntBASIC-0.1□□□□□ -2.43
SHC1P29353 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.1□□□□□ -2.43
SHC1P29353 RNU6-411P-201ENST00000384451 107 ntBASIC-0.11□□□□□ -2.43
SHC1P29353 MIR154-201ENST00000385243 84 ntBASIC-0.11□□□□□ -2.43
SHC1P29353 AC104692.1-201ENST00000472406 90 ntBASIC-0.11□□□□□ -2.43
SHC1P29353 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
SHC1P29353 SNORD115-23-201ENST00000364461 82 ntBASIC-0.12□□□□□ -2.43
SHC1P29353 U2.7-201ENST00000619197 100 ntBASIC-0.12□□□□□ -2.43
SHC1P29353 SNORA18.1-201ENST00000363418 128 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 RNU6-776P-201ENST00000364403 104 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 SNORD116-24-201ENST00000384549 92 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 SNORD56B-201ENST00000384713 71 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 AL391099.1-201ENST00000624635 187 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
SHC1P29353 RNU6-973P-201ENST00000364690 107 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 MIR519A2-201ENST00000384990 87 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 MIR4280-201ENST00000582178 76 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 AL590491.3-201ENST00000610731 82 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 MIR4662A-201ENST00000637499 67 ntBASIC-0.14□□□□□ -2.43
SHC1P29353 RNU6-634P-201ENST00000459134 106 ntBASIC-0.15□□□□□ -2.43
SHC1P29353 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
SHC1P29353 MIR4432-201ENST00000581823 84 ntBASIC-0.15□□□□□ -2.43
SHC1P29353 MIR5704-201ENST00000584029 77 ntBASIC-0.15□□□□□ -2.43
SHC1P29353 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 AC096531.1-201ENST00000419107 107 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 MTND4LP1-201ENST00000446263 157 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 MIR8068-201ENST00000618032 68 ntBASIC-0.16□□□□□ -2.44
SHC1P29353 RNU6-668P-201ENST00000364180 107 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 RNU6-901P-201ENST00000384593 106 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 RNU6-540P-201ENST00000384622 101 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 MIR548C-201ENST00000384815 97 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 RNU6-518P-201ENST00000516056 96 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 AL353803.5-201ENST00000599815 141 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 snoR1.1-201ENST00000628177 80 ntBASIC-0.17□□□□□ -2.44
SHC1P29353 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 RNU6-895P-201ENST00000384125 103 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 MIR329-2-201ENST00000385029 84 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
SHC1P29353 AL445193.1-201ENST00000441183 141 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 RNU7-174P-201ENST00000516248 59 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 RNA5SP470-201ENST00000516463 106 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 RNU6-638P-201ENST00000516582 104 ntBASIC-0.18□□□□□ -2.44
SHC1P29353 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms