Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MTND4LP9-201ENST00000427694 174 ntBASIC-1.5□□□□□ -2.65
USF1P22415 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.5□□□□□ -2.65
USF1P22415 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.5□□□□□ -2.65
USF1P22415 RNU6-426P-201ENST00000516464 97 ntBASIC-1.5□□□□□ -2.65
USF1P22415 RNU6-774P-201ENST00000363238 107 ntBASIC-1.51□□□□□ -2.65
USF1P22415 RNU6-246P-201ENST00000384702 107 ntBASIC-1.51□□□□□ -2.65
USF1P22415 SNORD19-201ENST00000391191 68 ntBASIC-1.51□□□□□ -2.65
USF1P22415 AL078595.1-201ENST00000404458 226 ntBASIC-1.51□□□□□ -2.65
USF1P22415 AL021921.1-201ENST00000442774 93 ntBASIC-1.51□□□□□ -2.65
USF1P22415 MIR4796-201ENST00000580742 81 ntBASIC-1.51□□□□□ -2.65
USF1P22415 SNORD18.1-201ENST00000363807 70 ntBASIC-1.52□□□□□ -2.65
USF1P22415 RNU6-379P-201ENST00000363813 104 ntBASIC-1.52□□□□□ -2.65
USF1P22415 RNU6-463P-201ENST00000384340 107 ntBASIC-1.52□□□□□ -2.65
USF1P22415 RNU6-983P-201ENST00000516004 103 ntBASIC-1.52□□□□□ -2.65
USF1P22415 RNU6-752P-201ENST00000516376 102 ntBASIC-1.52□□□□□ -2.65
USF1P22415 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.52□□□□□ -2.65
USF1P22415 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.53□□□□□ -2.65
USF1P22415 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.53□□□□□ -2.65
USF1P22415 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.53□□□□□ -2.65
USF1P22415 RNU6-972P-201ENST00000391208 107 ntBASIC-1.54□□□□□ -2.66
USF1P22415 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.54□□□□□ -2.66
USF1P22415 RNU6-887P-201ENST00000410660 100 ntBASIC-1.54□□□□□ -2.66
USF1P22415 RNU7-107P-201ENST00000459121 61 ntBASIC-1.54□□□□□ -2.66
USF1P22415 U7.5-201ENST00000517224 61 ntBASIC-1.54□□□□□ -2.66
USF1P22415 MTND5P41-201ENST00000517498 206 ntBASIC-1.54□□□□□ -2.66
USF1P22415 RNU6-228P-201ENST00000362700 106 ntBASIC-1.55□□□□□ -2.66
USF1P22415 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.55□□□□□ -2.66
USF1P22415 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.55□□□□□ -2.66
USF1P22415 RNU7-88P-201ENST00000458752 63 ntBASIC-1.55□□□□□ -2.66
USF1P22415 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
USF1P22415 MIR5683-201ENST00000636514 76 ntBASIC-1.55□□□□□ -2.66
USF1P22415 MIR3914-2-201ENST00000637339 95 ntBASIC-1.55□□□□□ -2.66
USF1P22415 RNU6-694P-201ENST00000364071 147 ntBASIC-1.56□□□□□ -2.66
USF1P22415 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.56□□□□□ -2.66
USF1P22415 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.56□□□□□ -2.66
USF1P22415 SNORD33.1-201ENST00000516213 88 ntBASIC-1.56□□□□□ -2.66
USF1P22415 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RPL35AP4-201ENST00000412007 102 ntBASIC-1.57□□□□□ -2.66
USF1P22415 AC090616.4-201ENST00000448026 115 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RNU6-168P-201ENST00000516189 101 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RNU6-904P-201ENST00000516206 101 ntBASIC-1.57□□□□□ -2.66
USF1P22415 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RNU6-656P-201ENST00000516785 107 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RNU6-388P-201ENST00000517012 105 ntBASIC-1.57□□□□□ -2.66
USF1P22415 RNU6-389P-201ENST00000517048 105 ntBASIC-1.57□□□□□ -2.66
USF1P22415 MIR4490-201ENST00000582647 84 ntBASIC-1.57□□□□□ -2.66
USF1P22415 U2.7-201ENST00000619197 100 ntBASIC-1.57□□□□□ -2.66
USF1P22415 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.58□□□□□ -2.66
USF1P22415 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.58□□□□□ -2.66
USF1P22415 SCARNA23-201ENST00000516060 130 ntBASIC-1.58□□□□□ -2.66
USF1P22415 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.58□□□□□ -2.66
USF1P22415 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.58□□□□□ -2.66
USF1P22415 SNORD116-10-201ENST00000363791 102 ntBASIC-1.59□□□□□ -2.66
USF1P22415 RNU6-340P-201ENST00000364005 107 ntBASIC-1.59□□□□□ -2.66
USF1P22415 SNORA40-201ENST00000388090 126 ntBASIC-1.59□□□□□ -2.66
USF1P22415 RNU6-257P-201ENST00000410238 98 ntBASIC-1.59□□□□□ -2.66
USF1P22415 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.59□□□□□ -2.66
USF1P22415 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.59□□□□□ -2.66
USF1P22415 AL353621.2-201ENST00000605340 133 ntBASIC-1.59□□□□□ -2.66
USF1P22415 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.6□□□□□ -2.67
USF1P22415 MIR1236-201ENST00000408340 102 ntBASIC-1.6□□□□□ -2.67
USF1P22415 AC108019.1-201ENST00000512540 175 ntBASIC-1.6□□□□□ -2.67
USF1P22415 RNU7-153P-201ENST00000516455 62 ntBASIC-1.6□□□□□ -2.67
USF1P22415 AL035461.1-201ENST00000421490 332 ntBASIC-1.61□□□□□ -2.67
USF1P22415 AL450471.1-201ENST00000447509 127 ntBASIC-1.61□□□□□ -2.67
USF1P22415 RNU6-807P-201ENST00000516805 107 ntBASIC-1.61□□□□□ -2.67
USF1P22415 RNU6-182P-201ENST00000516970 105 ntBASIC-1.61□□□□□ -2.67
USF1P22415 RNU6-537P-201ENST00000517277 103 ntBASIC-1.61□□□□□ -2.67
USF1P22415 MIR4756-201ENST00000577874 78 ntBASIC-1.61□□□□□ -2.67
USF1P22415 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.62□□□□□ -2.67
USF1P22415 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.62□□□□□ -2.67
USF1P22415 MT-TG-201ENST00000387429 68 ntBASIC-1.62□□□□□ -2.67
USF1P22415 RNU6-478P-201ENST00000363904 110 ntBASIC-1.63□□□□□ -2.67
USF1P22415 SNORD115-27-201ENST00000364430 82 ntBASIC-1.63□□□□□ -2.67
USF1P22415 MIR548A3-201ENST00000385297 97 ntBASIC-1.63□□□□□ -2.67
USF1P22415 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.63□□□□□ -2.67
USF1P22415 U6.95-201ENST00000636931 70 ntBASIC-1.63□□□□□ -2.67
USF1P22415 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.64□□□□□ -2.67
USF1P22415 RNU6-79P-201ENST00000362511 107 ntBASIC-1.65□□□□□ -2.67
USF1P22415 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.65□□□□□ -2.67
USF1P22415 RNU6-971P-201ENST00000516920 106 ntBASIC-1.65□□□□□ -2.67
USF1P22415 RNU6-681P-201ENST00000364012 104 ntBASIC-1.66□□□□□ -2.68
USF1P22415 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.66□□□□□ -2.68
USF1P22415 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.66□□□□□ -2.68
USF1P22415 RNU6-400P-201ENST00000391173 106 ntBASIC-1.66□□□□□ -2.68
USF1P22415 RNU7-61P-201ENST00000515897 61 ntBASIC-1.66□□□□□ -2.68
USF1P22415 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.67□□□□□ -2.68
USF1P22415 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.67□□□□□ -2.68
USF1P22415 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.67□□□□□ -2.68
USF1P22415 RNU6-886P-201ENST00000384319 105 ntBASIC-1.67□□□□□ -2.68
USF1P22415 SNORD77.2-201ENST00000391045 68 ntBASIC-1.67□□□□□ -2.68
USF1P22415 RNU7-200P-201ENST00000516105 62 ntBASIC-1.67□□□□□ -2.68
USF1P22415 RNU6-659P-201ENST00000516454 104 ntBASIC-1.67□□□□□ -2.68
USF1P22415 RNU6-645P-201ENST00000364649 106 ntBASIC-1.68□□□□□ -2.68
USF1P22415 RNU6-880P-201ENST00000384526 107 ntBASIC-1.68□□□□□ -2.68
USF1P22415 MIR548Q-201ENST00000408404 100 ntBASIC-1.68□□□□□ -2.68
USF1P22415 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.68□□□□□ -2.68
USF1P22415 MIR664B-201ENST00000626756 61 ntBASIC-1.68□□□□□ -2.68
USF1P22415 RNU6-458P-201ENST00000384179 107 ntBASIC-1.69□□□□□ -2.68
USF1P22415 MIR590-201ENST00000385008 97 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms