Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNA5SP180-201ENST00000516181 101 ntBASIC-1.16□□□□□ -2.6
XRCC1P18887 MIR3657-201ENST00000584818 117 ntBASIC-1.16□□□□□ -2.6
XRCC1P18887 RNU6-959P-201ENST00000384671 107 ntBASIC-1.17□□□□□ -2.6
XRCC1P18887 RNU7-61P-201ENST00000515897 61 ntBASIC-1.17□□□□□ -2.6
XRCC1P18887 MIR6129-201ENST00000616087 109 ntBASIC-1.17□□□□□ -2.6
XRCC1P18887 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.18□□□□□ -2.6
XRCC1P18887 RNU6-752P-201ENST00000516376 102 ntBASIC-1.18□□□□□ -2.6
XRCC1P18887 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 SNORA33.1-201ENST00000364957 130 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 MIR1468-201ENST00000410600 86 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 HLA-S-202ENST00000425174 53 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 RNA5SP147-201ENST00000516493 109 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 RNU6-158P-201ENST00000517104 100 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 MIR3671-201ENST00000580455 88 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 MIR3668-201ENST00000582138 75 ntBASIC-1.19□□□□□ -2.6
XRCC1P18887 MIR203A-201ENST00000384836 110 ntBASIC-1.2□□□□□ -2.6
XRCC1P18887 MIR1255B2-201ENST00000408618 67 ntBASIC-1.2□□□□□ -2.6
XRCC1P18887 RNU6-924P-201ENST00000362926 108 ntBASIC-1.21□□□□□ -2.6
XRCC1P18887 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.21□□□□□ -2.6
XRCC1P18887 AL450471.1-201ENST00000447509 127 ntBASIC-1.21□□□□□ -2.6
XRCC1P18887 RNU6-479P-201ENST00000516348 105 ntBASIC-1.21□□□□□ -2.6
XRCC1P18887 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.21□□□□□ -2.6
XRCC1P18887 AC138207.3-201ENST00000585289 166 ntBASIC-1.21□□□□□ -2.6
XRCC1P18887 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 RNU6-106P-201ENST00000384405 107 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 MIR521-2-201ENST00000384818 87 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 MIR29B1-201ENST00000385015 81 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 CYP3A54P-201ENST00000566950 75 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 MIR1246-201ENST00000636535 73 ntBASIC-1.22□□□□□ -2.6
XRCC1P18887 RNU6-834P-201ENST00000362367 110 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 SNORA26.4-201ENST00000391188 123 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 MIR889-201ENST00000401280 79 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 RNU6-554P-201ENST00000410466 106 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 U7.3-201ENST00000616123 62 ntBASIC-1.23□□□□□ -2.61
XRCC1P18887 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
XRCC1P18887 RNU6-681P-201ENST00000364012 104 ntBASIC-1.24□□□□□ -2.61
XRCC1P18887 RNU6-81P-201ENST00000365608 104 ntBASIC-1.24□□□□□ -2.61
XRCC1P18887 MIR5591-201ENST00000578248 65 ntBASIC-1.24□□□□□ -2.61
XRCC1P18887 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.24□□□□□ -2.61
XRCC1P18887 AC132825.6-201ENST00000638861 357 ntBASIC-1.24□□□□□ -2.61
XRCC1P18887 RNU6-774P-201ENST00000363238 107 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 RNU6-540P-201ENST00000384622 101 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 RNU2-51P-201ENST00000410708 197 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 SNORD63.1-201ENST00000516178 80 ntBASIC-1.25□□□□□ -2.61
XRCC1P18887 RNU7-154P-201ENST00000516194 62 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 RNU6-162P-201ENST00000516228 103 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 RNU6-109P-201ENST00000516364 107 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 RNU6-184P-201ENST00000516514 107 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 MIR6739-201ENST00000622461 75 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 MIR198-201ENST00000637333 62 ntBASIC-1.26□□□□□ -2.61
XRCC1P18887 RNU6-766P-201ENST00000362478 107 ntBASIC-1.27□□□□□ -2.61
XRCC1P18887 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.27□□□□□ -2.61
XRCC1P18887 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.27□□□□□ -2.61
XRCC1P18887 MIR1285-2-201ENST00000408311 88 ntBASIC-1.27□□□□□ -2.61
XRCC1P18887 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.27□□□□□ -2.61
XRCC1P18887 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 MIR519C-201ENST00000385053 87 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 RNU7-153P-201ENST00000516455 62 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 MIR4520-1-201ENST00000582609 70 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 MIR6818-201ENST00000621576 65 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 MIR2052-201ENST00000636055 55 ntBASIC-1.28□□□□□ -2.61
XRCC1P18887 RNU6-340P-201ENST00000364005 107 ntBASIC-1.29□□□□□ -2.62
XRCC1P18887 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.29□□□□□ -2.62
XRCC1P18887 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.29□□□□□ -2.62
XRCC1P18887 AL365222.1-201ENST00000614661 98 ntBASIC-1.29□□□□□ -2.62
XRCC1P18887 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.3□□□□□ -2.62
XRCC1P18887 SNORD77.2-201ENST00000391045 68 ntBASIC-1.3□□□□□ -2.62
XRCC1P18887 MTATP8P2-201ENST00000435212 202 ntBASIC-1.3□□□□□ -2.62
XRCC1P18887 RNU6-589P-201ENST00000516485 107 ntBASIC-1.3□□□□□ -2.62
XRCC1P18887 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
XRCC1P18887 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.3□□□□□ -2.62
XRCC1P18887 SNORD115-22-201ENST00000364456 82 ntBASIC-1.31□□□□□ -2.62
XRCC1P18887 SNORA19-201ENST00000384737 128 ntBASIC-1.31□□□□□ -2.62
XRCC1P18887 MIR519A2-201ENST00000384990 87 ntBASIC-1.31□□□□□ -2.62
XRCC1P18887 MIR527-201ENST00000385244 85 ntBASIC-1.31□□□□□ -2.62
XRCC1P18887 SNORD115-37-201ENST00000363768 82 ntBASIC-1.32□□□□□ -2.62
XRCC1P18887 MIR365A-201ENST00000362260 87 ntBASIC-1.33□□□□□ -2.62
XRCC1P18887 RNA5SP26-201ENST00000362406 119 ntBASIC-1.33□□□□□ -2.62
XRCC1P18887 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
XRCC1P18887 RNU6-576P-201ENST00000390854 102 ntBASIC-1.33□□□□□ -2.62
XRCC1P18887 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
XRCC1P18887 RNU4-61P-201ENST00000411243 107 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 AL021921.1-201ENST00000442774 93 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 AL353691.2-201ENST00000443795 59 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 RNU6-518P-201ENST00000516056 96 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 MIR6502-201ENST00000617296 76 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 U4.2-201ENST00000618561 85 ntBASIC-1.34□□□□□ -2.62
XRCC1P18887 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.35□□□□□ -2.63
XRCC1P18887 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.35□□□□□ -2.63
XRCC1P18887 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.35□□□□□ -2.63
XRCC1P18887 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.35□□□□□ -2.63
XRCC1P18887 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.35□□□□□ -2.63
XRCC1P18887 RNU6-633P-201ENST00000362612 103 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms