Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-172P-201ENST00000411000 93 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 SNORA40.14-201ENST00000516543 86 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 RNU6-681P-201ENST00000364012 104 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 SNORD2.1-201ENST00000458762 69 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 RNU6-300P-201ENST00000459080 104 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 SNORD116.3-201ENST00000517176 78 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 Y_RNA.183-201ENST00000363882 113 ntBASIC-4.62□□□□□ -3.15
HMGA1P17096 SNORD58B-201ENST00000607313 66 ntBASIC-4.62□□□□□ -3.15
HMGA1P17096 SNORA41B-201ENST00000384785 128 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 MIR1263-201ENST00000408324 86 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 RNU6-554P-201ENST00000410466 106 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 Y_RNA.402-201ENST00000383972 102 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 RNU6-813P-201ENST00000384691 107 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 SNORA75.5-201ENST00000391291 81 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 RNU6-121P-201ENST00000410525 99 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 RNU6-982P-201ENST00000516216 102 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 RNU6-176P-201ENST00000517196 105 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 MIR5690-201ENST00000583739 73 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 MIR4439-201ENST00000583746 80 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 MIR656-201ENST00000385224 78 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 Y_RNA.590-201ENST00000410140 107 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 AL160413.1-201ENST00000622780 310 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 SNORA63-201ENST00000363450 132 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 RNU5A-2P-201ENST00000384337 116 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 Y_RNA.496-201ENST00000384444 101 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 MIR4694-201ENST00000578534 80 ntBASIC-4.69□□□□□ -3.16
HMGA1P17096 MIR3613-201ENST00000579844 87 ntBASIC-4.69□□□□□ -3.16
HMGA1P17096 Y_RNA.262-201ENST00000364641 102 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 Y_RNA.359-201ENST00000365498 102 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 MIR6844-201ENST00000637122 62 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 RNU6-755P-201ENST00000364400 103 ntBASIC-4.71□□□□□ -3.16
HMGA1P17096 Y_RNA.44-201ENST00000362676 108 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 RNU4-11P-201ENST00000365287 132 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-604P-201ENST00000390917 100 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-956P-201ENST00000458868 103 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU7-160P-201ENST00000516660 62 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 MIR3149-201ENST00000584629 83 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-822P-201ENST00000362707 106 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 SNORD58A-201ENST00000383875 65 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNU6-510P-201ENST00000391239 108 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 Y_RNA.635-201ENST00000459041 101 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNY3P16-201ENST00000516338 101 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 Y_RNA.166-201ENST00000363730 102 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 SNORD45B-201ENST00000364617 72 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 RNY4P18-201ENST00000391107 89 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.75□□□□□ -3.17
HMGA1P17096 MIR363-201ENST00000384840 75 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 RNU6-493P-201ENST00000391321 108 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 RNA5SP449-201ENST00000516871 130 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 SNORD77.2-201ENST00000391045 68 ntBASIC-4.77□□□□□ -3.17
HMGA1P17096 RNY3P2-201ENST00000362918 102 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 AC009094.1-201ENST00000564443 426 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 RNU6-275P-201ENST00000364910 107 ntBASIC-4.79□□□□□ -3.18
HMGA1P17096 RNA5SP136-201ENST00000410906 107 ntBASIC-4.79□□□□□ -3.18
HMGA1P17096 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 AC139453.2-201ENST00000487255 133 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 MTND1P19-201ENST00000511780 315 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 MIR548P-201ENST00000408336 84 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 RNU7-153P-201ENST00000516455 62 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 AC109635.3-201ENST00000529536 185 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 RNA5SP224-201ENST00000365069 126 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 RNU6-1338P-201ENST00000516328 91 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 SNORD45C-201ENST00000383893 79 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-259P-201ENST00000383999 107 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-788P-201ENST00000390967 104 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 MTND5P22-201ENST00000458380 195 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 AC078883.4-201ENST00000623218 367 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU4-85P-201ENST00000364675 123 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 RNA5SP173-201ENST00000364857 136 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 MIR1236-201ENST00000408340 102 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 RNU6-129P-201ENST00000391022 107 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 SNORD37.2-201ENST00000391075 66 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 AC062037.1-201ENST00000605302 128 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 RNU6-330P-201ENST00000363015 107 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 RNU6-795P-201ENST00000516323 103 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 SNORA40.15-201ENST00000516884 107 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 SNORD127-201ENST00000458892 86 ntBASIC-4.88□□□□□ -3.19
HMGA1P17096 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.88□□□□□ -3.19
HMGA1P17096 AC090971.5-201ENST00000621102 293 ntBASIC-4.88□□□□□ -3.19
HMGA1P17096 RNU6-806P-201ENST00000365147 105 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 Y_RNA.337-201ENST00000365312 102 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 MIR4282-201ENST00000583613 67 ntBASIC-4.89□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms