Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNA5SP470-201ENST00000516463 106 ntBASIC0.95□□□□□ -2.26
KRT1P04264 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.94□□□□□ -2.26
KRT1P04264 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
KRT1P04264 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
KRT1P04264 U7.6-201ENST00000610841 64 ntBASIC0.94□□□□□ -2.26
KRT1P04264 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
KRT1P04264 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
KRT1P04264 RNU6-810P-201ENST00000364001 107 ntBASIC0.92□□□□□ -2.26
KRT1P04264 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
KRT1P04264 SNORD115-25-201ENST00000362619 82 ntBASIC0.91□□□□□ -2.26
KRT1P04264 MIR216A-201ENST00000385063 110 ntBASIC0.91□□□□□ -2.26
KRT1P04264 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
KRT1P04264 AC098934.3-201ENST00000430450 190 ntBASIC0.91□□□□□ -2.26
KRT1P04264 MIR6773-201ENST00000612812 74 ntBASIC0.91□□□□□ -2.26
KRT1P04264 AL627230.5-201ENST00000619807 58 ntBASIC0.91□□□□□ -2.26
KRT1P04264 RNA5SP62-201ENST00000363457 110 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
KRT1P04264 RNU6-337P-201ENST00000391243 106 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
KRT1P04264 SNORD1B-201ENST00000363091 84 ntBASIC0.89□□□□□ -2.27
KRT1P04264 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
KRT1P04264 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
KRT1P04264 RNU1-29P-201ENST00000606574 126 ntBASIC0.89□□□□□ -2.27
KRT1P04264 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
KRT1P04264 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRT1P04264 Y_RNA.109-201ENST00000363215 102 ntBASIC0.88□□□□□ -2.27
KRT1P04264 RNA5SP457-201ENST00000363657 124 ntBASIC0.88□□□□□ -2.27
KRT1P04264 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
KRT1P04264 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
KRT1P04264 AC069271.1-201ENST00000445577 156 ntBASIC0.88□□□□□ -2.27
KRT1P04264 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
KRT1P04264 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
KRT1P04264 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
KRT1P04264 MIR548F3-201ENST00000408509 87 ntBASIC0.87□□□□□ -2.27
KRT1P04264 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
KRT1P04264 RNU6-838P-201ENST00000363399 108 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-458P-201ENST00000384179 107 ntBASIC0.86□□□□□ -2.27
KRT1P04264 MIRLET7B-201ENST00000385140 83 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-229P-201ENST00000516614 102 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-419P-201ENST00000517030 63 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU7-188P-201ENST00000517063 64 ntBASIC0.86□□□□□ -2.27
KRT1P04264 U6.58-201ENST00000613107 107 ntBASIC0.86□□□□□ -2.27
KRT1P04264 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.86□□□□□ -2.27
KRT1P04264 MIR6086-201ENST00000638065 55 ntBASIC0.86□□□□□ -2.27
KRT1P04264 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
KRT1P04264 SNORA49-201ENST00000386157 136 ntBASIC0.85□□□□□ -2.27
KRT1P04264 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
KRT1P04264 MIR548AG1-201ENST00000579932 66 ntBASIC0.85□□□□□ -2.27
KRT1P04264 MIR193B-201ENST00000384907 83 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-848P-201ENST00000515948 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-617P-201ENST00000516147 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-473P-201ENST00000516164 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-1049P-201ENST00000516414 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR4490-201ENST00000582647 84 ntBASIC0.84□□□□□ -2.27
KRT1P04264 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KRT1P04264 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
KRT1P04264 SNORA40.8-201ENST00000411034 126 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU7-160P-201ENST00000516660 62 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU6-782P-201ENST00000516852 104 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU6-175P-201ENST00000516896 107 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
KRT1P04264 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
KRT1P04264 RNU6-502P-201ENST00000362419 108 ntBASIC0.82□□□□□ -2.28
KRT1P04264 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
KRT1P04264 SNORD71-201ENST00000411292 86 ntBASIC0.82□□□□□ -2.28
KRT1P04264 AC084368.1-201ENST00000620935 65 ntBASIC0.82□□□□□ -2.28
KRT1P04264 RNU6-247P-201ENST00000362636 107 ntBASIC0.81□□□□□ -2.28
KRT1P04264 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
KRT1P04264 MIR4677-201ENST00000584153 80 ntBASIC0.81□□□□□ -2.28
KRT1P04264 RNU6-1036P-201ENST00000383959 104 ntBASIC0.8□□□□□ -2.28
KRT1P04264 Y_RNA.423-201ENST00000384057 113 ntBASIC0.8□□□□□ -2.28
KRT1P04264 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
KRT1P04264 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
KRT1P04264 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
KRT1P04264 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
KRT1P04264 RNU6-1206P-201ENST00000516339 103 ntBASIC0.79□□□□□ -2.28
KRT1P04264 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
KRT1P04264 MIR545-201ENST00000385085 106 ntBASIC0.78□□□□□ -2.28
KRT1P04264 AL353803.5-201ENST00000599815 141 ntBASIC0.78□□□□□ -2.28
KRT1P04264 RNU6-598P-201ENST00000364017 105 ntBASIC0.77□□□□□ -2.29
KRT1P04264 MIR501-201ENST00000390204 84 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNU6-1232P-201ENST00000516299 86 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNU7-151P-201ENST00000516930 53 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNA5SP257-201ENST00000363023 116 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR579-201ENST00000385221 98 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNU6-995P-201ENST00000391244 107 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR548AA1-201ENST00000384971 97 ntBASIC0.75□□□□□ -2.29
KRT1P04264 MIR924-201ENST00000638017 53 ntBASIC0.75□□□□□ -2.29
KRT1P04264 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
KRT1P04264 Y_RNA.69-201ENST00000362885 109 ntBASIC0.74□□□□□ -2.29
KRT1P04264 MIR329-2-201ENST00000385029 84 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 232.2 ms