Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.97□□□□□ -2.88
APOEP02649 RNU6-807P-201ENST00000516805 107 ntBASIC-2.97□□□□□ -2.88
APOEP02649 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.98□□□□□ -2.89
APOEP02649 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.98□□□□□ -2.89
APOEP02649 MT-TM-201ENST00000387377 68 ntBASIC-2.98□□□□□ -2.89
APOEP02649 AC012531.4-201ENST00000616509 177 ntBASIC-2.98□□□□□ -2.89
APOEP02649 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.99□□□□□ -2.89
APOEP02649 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.99□□□□□ -2.89
APOEP02649 Y_RNA.630-201ENST00000411370 108 ntBASIC-3□□□□□ -2.89
APOEP02649 MIR5009-201ENST00000578736 100 ntBASIC-3□□□□□ -2.89
APOEP02649 RNU6-608P-201ENST00000383927 104 ntBASIC-3.01□□□□□ -2.89
APOEP02649 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.01□□□□□ -2.89
APOEP02649 SNORD58A-201ENST00000383875 65 ntBASIC-3.02□□□□□ -2.89
APOEP02649 RNU6-458P-201ENST00000384179 107 ntBASIC-3.02□□□□□ -2.89
APOEP02649 AL450471.1-201ENST00000447509 127 ntBASIC-3.02□□□□□ -2.89
APOEP02649 U6.58-201ENST00000613107 107 ntBASIC-3.02□□□□□ -2.89
APOEP02649 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.03□□□□□ -2.89
APOEP02649 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.03□□□□□ -2.89
APOEP02649 RNU6-630P-201ENST00000391258 106 ntBASIC-3.03□□□□□ -2.89
APOEP02649 MTCYBP6-201ENST00000441810 138 ntBASIC-3.03□□□□□ -2.89
APOEP02649 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.03□□□□□ -2.89
APOEP02649 SNORA20.1-201ENST00000364790 130 ntBASIC-3.04□□□□□ -2.9
APOEP02649 MIR548C-201ENST00000384815 97 ntBASIC-3.04□□□□□ -2.9
APOEP02649 MIR548X2-201ENST00000579776 100 ntBASIC-3.04□□□□□ -2.9
APOEP02649 RNU6-340P-201ENST00000364005 107 ntBASIC-3.05□□□□□ -2.9
APOEP02649 RNU6-696P-201ENST00000390834 107 ntBASIC-3.05□□□□□ -2.9
APOEP02649 RNU6-861P-201ENST00000516745 106 ntBASIC-3.05□□□□□ -2.9
APOEP02649 AL035461.1-201ENST00000421490 332 ntBASIC-3.06□□□□□ -2.9
APOEP02649 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.06□□□□□ -2.9
APOEP02649 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.06□□□□□ -2.9
APOEP02649 AL117187.1-201ENST00000555482 181 ntBASIC-3.06□□□□□ -2.9
APOEP02649 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.07□□□□□ -2.9
APOEP02649 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.07□□□□□ -2.9
APOEP02649 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.07□□□□□ -2.9
APOEP02649 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.08□□□□□ -2.9
APOEP02649 RNU6-258P-201ENST00000390884 101 ntBASIC-3.08□□□□□ -2.9
APOEP02649 RNU6-972P-201ENST00000391208 107 ntBASIC-3.08□□□□□ -2.9
APOEP02649 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.08□□□□□ -2.9
APOEP02649 SNORD116-18-201ENST00000383961 92 ntBASIC-3.09□□□□□ -2.9
APOEP02649 MIR520D-201ENST00000385002 87 ntBASIC-3.09□□□□□ -2.9
APOEP02649 MIR1236-201ENST00000408340 102 ntBASIC-3.09□□□□□ -2.9
APOEP02649 MIR23C-201ENST00000579846 100 ntBASIC-3.09□□□□□ -2.9
APOEP02649 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.09□□□□□ -2.9
APOEP02649 RNU6-681P-201ENST00000364012 104 ntBASIC-3.1□□□□□ -2.91
APOEP02649 MIR548A3-201ENST00000385297 97 ntBASIC-3.1□□□□□ -2.91
APOEP02649 RNU6-887P-201ENST00000410660 100 ntBASIC-3.1□□□□□ -2.91
APOEP02649 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.1□□□□□ -2.91
APOEP02649 RNU6-645P-201ENST00000364649 106 ntBASIC-3.11□□□□□ -2.91
APOEP02649 RNU6-772P-201ENST00000516042 105 ntBASIC-3.11□□□□□ -2.91
APOEP02649 MIR466-201ENST00000580653 84 ntBASIC-3.11□□□□□ -2.91
APOEP02649 RNU6-563P-201ENST00000364872 108 ntBASIC-3.12□□□□□ -2.91
APOEP02649 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.12□□□□□ -2.91
APOEP02649 SNORD54-201ENST00000459159 67 ntBASIC-3.12□□□□□ -2.91
APOEP02649 RNU7-153P-201ENST00000516455 62 ntBASIC-3.12□□□□□ -2.91
APOEP02649 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.12□□□□□ -2.91
APOEP02649 AC120024.2-201ENST00000576526 175 ntBASIC-3.12□□□□□ -2.91
APOEP02649 AL157777.2-201ENST00000258070 137 ntBASIC-3.13□□□□□ -2.91
APOEP02649 RNU6-682P-201ENST00000363843 106 ntBASIC-3.13□□□□□ -2.91
APOEP02649 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.13□□□□□ -2.91
APOEP02649 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.13□□□□□ -2.91
APOEP02649 MIR3144-201ENST00000579460 79 ntBASIC-3.13□□□□□ -2.91
APOEP02649 AC062037.2-201ENST00000610137 73 ntBASIC-3.13□□□□□ -2.91
APOEP02649 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.14□□□□□ -2.91
APOEP02649 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.14□□□□□ -2.91
APOEP02649 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.14□□□□□ -2.91
APOEP02649 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.14□□□□□ -2.91
APOEP02649 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.15□□□□□ -2.91
APOEP02649 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.15□□□□□ -2.91
APOEP02649 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.15□□□□□ -2.91
APOEP02649 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.15□□□□□ -2.91
APOEP02649 MIR569-201ENST00000385228 96 ntBASIC-3.15□□□□□ -2.91
APOEP02649 AC044792.1-201ENST00000593294 196 ntBASIC-3.15□□□□□ -2.91
APOEP02649 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.16□□□□□ -2.92
APOEP02649 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.17□□□□□ -2.92
APOEP02649 RNU7-174P-201ENST00000516248 59 ntBASIC-3.17□□□□□ -2.92
APOEP02649 SNORD116-10-201ENST00000363791 102 ntBASIC-3.18□□□□□ -2.92
APOEP02649 RNU6-598P-201ENST00000364017 105 ntBASIC-3.18□□□□□ -2.92
APOEP02649 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.18□□□□□ -2.92
APOEP02649 MIR4748-201ENST00000578076 82 ntBASIC-3.18□□□□□ -2.92
APOEP02649 MIR429-201ENST00000362106 83 ntBASIC-3.19□□□□□ -2.92
APOEP02649 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.19□□□□□ -2.92
APOEP02649 SCARNA23-201ENST00000516060 130 ntBASIC-3.19□□□□□ -2.92
APOEP02649 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.19□□□□□ -2.92
APOEP02649 RNU6-537P-201ENST00000517277 103 ntBASIC-3.19□□□□□ -2.92
APOEP02649 RNU7-120P-201ENST00000459334 63 ntBASIC-3.2□□□□□ -2.92
APOEP02649 AC008737.2-201ENST00000599446 118 ntBASIC-3.2□□□□□ -2.92
APOEP02649 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.21□□□□□ -2.92
APOEP02649 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.21□□□□□ -2.92
APOEP02649 SNORD77.2-201ENST00000391045 68 ntBASIC-3.21□□□□□ -2.92
APOEP02649 RNU6-587P-201ENST00000391282 106 ntBASIC-3.23□□□□□ -2.93
APOEP02649 RNU6-394P-201ENST00000410735 107 ntBASIC-3.23□□□□□ -2.93
APOEP02649 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.24□□□□□ -2.93
APOEP02649 SNORD115-31-201ENST00000365318 82 ntBASIC-3.24□□□□□ -2.93
APOEP02649 MIR4801-201ENST00000582704 82 ntBASIC-3.24□□□□□ -2.93
APOEP02649 U2.18-201ENST00000622185 84 ntBASIC-3.24□□□□□ -2.93
APOEP02649 MIR548W-201ENST00000581970 74 ntBASIC-3.25□□□□□ -2.93
APOEP02649 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.25□□□□□ -2.93
APOEP02649 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.26□□□□□ -2.93
APOEP02649 RNU6-766P-201ENST00000362478 107 ntBASIC-3.26□□□□□ -2.93
APOEP02649 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.26□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms