Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORA19-201ENST00000384737 128 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 MIR1285-2-201ENST00000408311 88 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 MIR1236-201ENST00000408340 102 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 AC008267.6-201ENST00000441664 139 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 MIR3657-201ENST00000584818 117 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 AL353803.5-201ENST00000599815 141 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 AL365222.1-201ENST00000614661 98 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 U7.3-201ENST00000616123 62 ntBASIC-1.06□□□□□ -2.58
TRIM3O75382 SNORA33.1-201ENST00000364957 130 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 RNA5SP331-201ENST00000364986 107 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 RNU6-106P-201ENST00000384405 107 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 RNU7-153P-201ENST00000516455 62 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 MIR6129-201ENST00000616087 109 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 MIR198-201ENST00000637333 62 ntBASIC-1.07□□□□□ -2.58
TRIM3O75382 SNORD114-17-201ENST00000364699 75 ntBASIC-1.08□□□□□ -2.58
TRIM3O75382 HLA-S-202ENST00000425174 53 ntBASIC-1.08□□□□□ -2.58
TRIM3O75382 U6.81-201ENST00000612550 106 ntBASIC-1.08□□□□□ -2.58
TRIM3O75382 SNORA2.1-201ENST00000363089 137 ntBASIC-1.09□□□□□ -2.58
TRIM3O75382 MIR4441-201ENST00000582623 100 ntBASIC-1.09□□□□□ -2.58
TRIM3O75382 MIR365A-201ENST00000362260 87 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 RNU6-540P-201ENST00000384622 101 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 MIR1255B2-201ENST00000408618 67 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 MIR5591-201ENST00000578248 65 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.1□□□□□ -2.59
TRIM3O75382 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.11□□□□□ -2.59
TRIM3O75382 CYP3A54P-201ENST00000566950 75 ntBASIC-1.11□□□□□ -2.59
TRIM3O75382 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRIM3O75382 AL450471.1-201ENST00000447509 127 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 RNU7-134P-201ENST00000458997 64 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 MIR4464-201ENST00000580818 92 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.12□□□□□ -2.59
TRIM3O75382 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.13□□□□□ -2.59
TRIM3O75382 MIR8485-201ENST00000401372 91 ntBASIC-1.13□□□□□ -2.59
TRIM3O75382 RNU6-479P-201ENST00000516348 105 ntBASIC-1.13□□□□□ -2.59
TRIM3O75382 AC132825.6-201ENST00000638861 357 ntBASIC-1.13□□□□□ -2.59
TRIM3O75382 RNU6-81P-201ENST00000365608 104 ntBASIC-1.14□□□□□ -2.59
TRIM3O75382 MT-TR-201ENST00000387439 65 ntBASIC-1.14□□□□□ -2.59
TRIM3O75382 MIR6888-201ENST00000621977 67 ntBASIC-1.14□□□□□ -2.59
TRIM3O75382 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.14□□□□□ -2.59
TRIM3O75382 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 SNORD115-27-201ENST00000364430 82 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
TRIM3O75382 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.16□□□□□ -2.6
TRIM3O75382 AL445584.3-201ENST00000617173 78 ntBASIC-1.16□□□□□ -2.6
TRIM3O75382 AL627230.5-201ENST00000619807 58 ntBASIC-1.16□□□□□ -2.6
TRIM3O75382 RNU6-766P-201ENST00000362478 107 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 RNY4P27-201ENST00000363341 96 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 MIR521-2-201ENST00000384818 87 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 RNU6-589P-201ENST00000516485 107 ntBASIC-1.17□□□□□ -2.6
TRIM3O75382 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.17□□□□□ -2.6
TRIM3O75382 MIR29B1-201ENST00000385015 81 ntBASIC-1.18□□□□□ -2.6
TRIM3O75382 MIR519C-201ENST00000385053 87 ntBASIC-1.18□□□□□ -2.6
TRIM3O75382 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.18□□□□□ -2.6
TRIM3O75382 RNU6-340P-201ENST00000364005 107 ntBASIC-1.19□□□□□ -2.6
TRIM3O75382 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.19□□□□□ -2.6
TRIM3O75382 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.2□□□□□ -2.6
TRIM3O75382 MTATP8P2-201ENST00000435212 202 ntBASIC-1.2□□□□□ -2.6
TRIM3O75382 RNU6-983P-201ENST00000516004 103 ntBASIC-1.2□□□□□ -2.6
TRIM3O75382 RNU6-752P-201ENST00000516376 102 ntBASIC-1.2□□□□□ -2.6
TRIM3O75382 MIR6818-201ENST00000621576 65 ntBASIC-1.2□□□□□ -2.6
TRIM3O75382 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.21□□□□□ -2.6
TRIM3O75382 SNORD77.2-201ENST00000391045 68 ntBASIC-1.21□□□□□ -2.6
TRIM3O75382 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
TRIM3O75382 RNU6-681P-201ENST00000364012 104 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 RNU6-22P-201ENST00000384355 107 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 MIR889-201ENST00000401280 79 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 MIR548M-201ENST00000408260 86 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 RNU6-732P-201ENST00000516033 103 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 MIR6739-201ENST00000622461 75 ntBASIC-1.22□□□□□ -2.6
TRIM3O75382 RNU6-834P-201ENST00000362367 110 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 SNORD114-3-201ENST00000364969 75 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 MIR527-201ENST00000385244 85 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 RNU6-576P-201ENST00000390854 102 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 RNU2-51P-201ENST00000410708 197 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 RNU6-518P-201ENST00000516056 96 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.23□□□□□ -2.61
TRIM3O75382 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.24□□□□□ -2.61
TRIM3O75382 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.24□□□□□ -2.61
TRIM3O75382 MIR519A2-201ENST00000384990 87 ntBASIC-1.24□□□□□ -2.61
TRIM3O75382 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
TRIM3O75382 SNORD63.1-201ENST00000516178 80 ntBASIC-1.24□□□□□ -2.61
TRIM3O75382 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.24□□□□□ -2.61
TRIM3O75382 MIR450A1-201ENST00000362262 91 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 1206 ms