Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 MIR577-201ENST00000385196 96 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 MIR3171-201ENST00000584270 74 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 U2.7-201ENST00000619197 100 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.68□□□□□ -2.68
SHOX2O60902 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 RNU6-824P-201ENST00000363724 104 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 RNU6-151P-201ENST00000364158 107 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 RNU6-635P-201ENST00000516651 102 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 MIR6509-201ENST00000614603 85 ntBASIC-1.69□□□□□ -2.68
SHOX2O60902 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 RNU6-639P-201ENST00000384074 107 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 RNU6-458P-201ENST00000384179 107 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 RNU7-197P-201ENST00000458836 62 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 SNORD4B-201ENST00000459083 72 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 U6.58-201ENST00000613107 107 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 AC013734.1-201ENST00000619329 111 ntBASIC-1.7□□□□□ -2.68
SHOX2O60902 SNORD18C-201ENST00000362704 69 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 MIR203A-201ENST00000384836 110 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 RNA5SP292-201ENST00000390974 118 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 AC020661.2-201ENST00000560114 134 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 MIR3170-201ENST00000582699 77 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 AC005520.4-201ENST00000604337 90 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 U6.81-201ENST00000612550 106 ntBASIC-1.71□□□□□ -2.68
SHOX2O60902 RNU6-238P-201ENST00000363313 106 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 RNU6-915P-201ENST00000364943 103 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 RNY4P25-201ENST00000459254 96 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 RNU6-656P-201ENST00000516785 107 ntBASIC-1.72□□□□□ -2.68
SHOX2O60902 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 RNU6-460P-201ENST00000391158 108 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 MTND3P2-201ENST00000438452 342 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 MIR4694-201ENST00000578534 80 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.73□□□□□ -2.69
SHOX2O60902 SNORA27.2-201ENST00000363365 126 ntBASIC-1.74□□□□□ -2.69
SHOX2O60902 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.74□□□□□ -2.69
SHOX2O60902 RNU6-752P-201ENST00000516376 102 ntBASIC-1.74□□□□□ -2.69
SHOX2O60902 RNU6-781P-201ENST00000516377 101 ntBASIC-1.74□□□□□ -2.69
SHOX2O60902 MIR4773-1-201ENST00000637203 78 ntBASIC-1.74□□□□□ -2.69
SHOX2O60902 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 RNU6-987P-201ENST00000384759 104 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 RNU6-644P-201ENST00000391155 98 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 RNU6-587P-201ENST00000391282 106 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 MTATP8P1-201ENST00000467115 207 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 MIR3144-201ENST00000579460 79 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 MIR3613-201ENST00000579844 87 ntBASIC-1.75□□□□□ -2.69
SHOX2O60902 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.76□□□□□ -2.69
SHOX2O60902 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.76□□□□□ -2.69
SHOX2O60902 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.76□□□□□ -2.69
SHOX2O60902 SNORA33.2-201ENST00000365413 134 ntBASIC-1.76□□□□□ -2.69
SHOX2O60902 SNORA18.5-201ENST00000516616 101 ntBASIC-1.76□□□□□ -2.69
SHOX2O60902 RNU6-834P-201ENST00000362367 110 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 RNY1P1-201ENST00000364372 112 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 RNU4-11P-201ENST00000365287 132 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 MIR581-201ENST00000384895 96 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 MIR548A3-201ENST00000385297 97 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 RNU6-995P-201ENST00000391244 107 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 AL118496.2-201ENST00000448300 230 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 RNU7-174P-201ENST00000516248 59 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 MIR4439-201ENST00000583746 80 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 MIR548Z-201ENST00000584743 97 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.77□□□□□ -2.69
SHOX2O60902 MIR548I1-201ENST00000408810 149 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 MTATP6P29-201ENST00000415057 132 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 AL691482.2-201ENST00000457453 84 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 RNU4-71P-201ENST00000516258 113 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 RNU6-861P-201ENST00000516745 106 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 RNU6-971P-201ENST00000516920 106 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 AC022559.1-201ENST00000520905 205 ntBASIC-1.78□□□□□ -2.69
SHOX2O60902 RNY3P2-201ENST00000362918 102 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 MIR548AA1-201ENST00000384971 97 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 MIR548N-201ENST00000408742 75 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 SNORA81.3-201ENST00000517283 198 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.79□□□□□ -2.7
SHOX2O60902 AC103810.7-201ENST00000607821 91 ntBASIC-1.79□□□□□ -2.7
SHOX2O60902 AL158147.1-201ENST00000443970 75 ntBASIC-1.8□□□□□ -2.7
SHOX2O60902 AC141273.2-201ENST00000618989 130 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 242.8 ms