Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNA5SP173-201ENST00000364857 136 ntBASIC-0.19□□□□□ -2.44
HDAC3O15379 SNORA26.2-201ENST00000390922 122 ntBASIC-0.19□□□□□ -2.44
HDAC3O15379 MIR3675-201ENST00000583661 73 ntBASIC-0.19□□□□□ -2.44
HDAC3O15379 MIR6739-201ENST00000622461 75 ntBASIC-0.19□□□□□ -2.44
HDAC3O15379 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
HDAC3O15379 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.2□□□□□ -2.44
HDAC3O15379 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.2□□□□□ -2.44
HDAC3O15379 AL445193.1-201ENST00000441183 141 ntBASIC-0.2□□□□□ -2.44
HDAC3O15379 MIR5704-201ENST00000584029 77 ntBASIC-0.2□□□□□ -2.44
HDAC3O15379 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.2□□□□□ -2.44
HDAC3O15379 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 MIR521-2-201ENST00000384818 87 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
HDAC3O15379 RNU6-604P-201ENST00000390917 100 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.21□□□□□ -2.44
HDAC3O15379 RNU6-656P-201ENST00000516785 107 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.21□□□□□ -2.44
HDAC3O15379 MIR3666-201ENST00000607845 111 ntBASIC-0.21□□□□□ -2.44
HDAC3O15379 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
HDAC3O15379 SNORD115-23-201ENST00000364461 82 ntBASIC-0.22□□□□□ -2.44
HDAC3O15379 MIR8068-201ENST00000618032 68 ntBASIC-0.22□□□□□ -2.44
HDAC3O15379 AL391099.1-201ENST00000624635 187 ntBASIC-0.22□□□□□ -2.44
HDAC3O15379 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
HDAC3O15379 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HDAC3O15379 RNU6-228P-201ENST00000362700 106 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 RNU6-973P-201ENST00000364690 107 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 MIR1255B2-201ENST00000408618 67 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 RNU6-982P-201ENST00000516216 102 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 RNU6-807P-201ENST00000516805 107 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 CYP3A54P-201ENST00000566950 75 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 MIR4280-201ENST00000582178 76 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 MIR1297-201ENST00000637311 77 ntBASIC-0.23□□□□□ -2.45
HDAC3O15379 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 SNORD45.1-201ENST00000363181 77 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 RNU6-645P-201ENST00000364649 106 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 RNU6-901P-201ENST00000384593 106 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 RNU6-881P-201ENST00000516813 102 ntBASIC-0.24□□□□□ -2.45
HDAC3O15379 SNORD115-22-201ENST00000364456 82 ntBASIC-0.25□□□□□ -2.45
HDAC3O15379 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
HDAC3O15379 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.25□□□□□ -2.45
HDAC3O15379 RNA5SP66-201ENST00000517178 101 ntBASIC-0.25□□□□□ -2.45
HDAC3O15379 MIR4432-201ENST00000581823 84 ntBASIC-0.25□□□□□ -2.45
HDAC3O15379 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 RNU6-380P-201ENST00000410207 107 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 AC114755.3-201ENST00000481111 251 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 SNORD38.3-201ENST00000516599 73 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 RNA5SP169-201ENST00000517268 117 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 MIR4263-201ENST00000584745 83 ntBASIC-0.26□□□□□ -2.45
HDAC3O15379 MIR1255A-201ENST00000408338 113 ntBASIC-0.27□□□□□ -2.45
HDAC3O15379 MIR3134-201ENST00000579433 74 ntBASIC-0.27□□□□□ -2.45
HDAC3O15379 snoR1.1-201ENST00000628177 80 ntBASIC-0.27□□□□□ -2.45
HDAC3O15379 SNORD45A-201ENST00000384512 84 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 MIR1302-4-201ENST00000408701 150 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 MIR4464-201ENST00000580818 92 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 AL353803.5-201ENST00000599815 141 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 MIR6851-201ENST00000617060 67 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 U2.7-201ENST00000619197 100 ntBASIC-0.28□□□□□ -2.45
HDAC3O15379 MIR519A2-201ENST00000384990 87 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 MIR329-2-201ENST00000385029 84 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 RNA5SP225-201ENST00000410874 135 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 MIR548AG1-201ENST00000579932 66 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 MIR3202-2-201ENST00000635980 79 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 AC093726.3-201ENST00000637588 150 ntBASIC-0.29□□□□□ -2.46
HDAC3O15379 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 RNU6-518P-201ENST00000516056 96 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 RNU6-70P-201ENST00000516438 60 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 MIR6854-201ENST00000614935 69 ntBASIC-0.3□□□□□ -2.46
HDAC3O15379 SNORD113.1-201ENST00000363280 73 ntBASIC-0.31□□□□□ -2.46
HDAC3O15379 SNORD78.1-201ENST00000390866 65 ntBASIC-0.31□□□□□ -2.46
HDAC3O15379 MIR6888-201ENST00000621977 67 ntBASIC-0.31□□□□□ -2.46
HDAC3O15379 MIR6759-201ENST00000638110 65 ntBASIC-0.31□□□□□ -2.46
HDAC3O15379 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.32□□□□□ -2.46
HDAC3O15379 MIR548C-201ENST00000384815 97 ntBASIC-0.32□□□□□ -2.46
HDAC3O15379 RNU6-857P-201ENST00000515893 110 ntBASIC-0.32□□□□□ -2.46
HDAC3O15379 RNA5SP285-201ENST00000516619 119 ntBASIC-0.32□□□□□ -2.46
HDAC3O15379 SNORD115-31-201ENST00000365318 82 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 MIR196A2-201ENST00000385189 110 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNU6-279P-201ENST00000391297 101 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNU6-687P-201ENST00000516443 89 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNA5SP470-201ENST00000516463 106 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNA5SP395-201ENST00000516567 118 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.33□□□□□ -2.46
HDAC3O15379 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 RNU6-587P-201ENST00000391282 106 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 AL021921.1-201ENST00000442774 93 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 RNU7-154P-201ENST00000516194 62 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 MIR8053-201ENST00000613344 75 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 295.1 ms