Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR519A2-201ENST00000384990 87 ntBASIC-0.96□□□□□ -2.56
SLC28A1O00337 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.96□□□□□ -2.56
SLC28A1O00337 SNORD77.2-201ENST00000391045 68 ntBASIC-0.96□□□□□ -2.56
SLC28A1O00337 SCARNA17-201ENST00000516183 144 ntBASIC-0.96□□□□□ -2.56
SLC28A1O00337 RNU6-752P-201ENST00000516376 102 ntBASIC-0.96□□□□□ -2.56
SLC28A1O00337 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.97□□□□□ -2.56
SLC28A1O00337 RNU6-479P-201ENST00000516348 105 ntBASIC-0.97□□□□□ -2.56
SLC28A1O00337 RNY4P18-201ENST00000391107 89 ntBASIC-0.98□□□□□ -2.57
SLC28A1O00337 MIR548AG1-201ENST00000579932 66 ntBASIC-0.98□□□□□ -2.57
SLC28A1O00337 RNU6-219P-201ENST00000364728 107 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 AL031737.1-201ENST00000450125 223 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 RNU6-313P-201ENST00000516317 112 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 RNU6-267P-201ENST00000516714 103 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 RNU6-656P-201ENST00000516785 107 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 MIR3910-1-201ENST00000580936 111 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 MIR382-201ENST00000637119 76 ntBASIC-0.99□□□□□ -2.57
SLC28A1O00337 RNU6-497P-201ENST00000365316 104 ntBASIC-1□□□□□ -2.57
SLC28A1O00337 RNA5SP25-201ENST00000410815 110 ntBASIC-1□□□□□ -2.57
SLC28A1O00337 RNU6-518P-201ENST00000516056 96 ntBASIC-1□□□□□ -2.57
SLC28A1O00337 RNU7-154P-201ENST00000516194 62 ntBASIC-1□□□□□ -2.57
SLC28A1O00337 AP001318.4-201ENST00000616637 121 ntBASIC-1□□□□□ -2.57
SLC28A1O00337 RNU6-624P-201ENST00000363411 107 ntBASIC-1.01□□□□□ -2.57
SLC28A1O00337 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.01□□□□□ -2.57
SLC28A1O00337 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.01□□□□□ -2.57
SLC28A1O00337 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.01□□□□□ -2.57
SLC28A1O00337 MALAT1.1-201ENST00000618249 95 ntBASIC-1.01□□□□□ -2.57
SLC28A1O00337 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
SLC28A1O00337 RNU6-402P-201ENST00000410678 103 ntBASIC-1.02□□□□□ -2.57
SLC28A1O00337 RNU6-330P-201ENST00000363015 107 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 RNU6-681P-201ENST00000364012 104 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 MIR488-201ENST00000365739 83 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 RNU2-51P-201ENST00000410708 197 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 AC140658.3-201ENST00000567603 271 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 AC132825.6-201ENST00000638861 357 ntBASIC-1.03□□□□□ -2.57
SLC28A1O00337 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 RNA5SP395-201ENST00000516567 118 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 U2.7-201ENST00000619197 100 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 MIR2052-201ENST00000636055 55 ntBASIC-1.04□□□□□ -2.58
SLC28A1O00337 SNORD115-37-201ENST00000363768 82 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 SNORD113-1-201ENST00000365321 69 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 SCARNA18B-201ENST00000458806 135 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 AC093729.1-201ENST00000513074 128 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 MIR4499-201ENST00000584834 69 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 uc_338.19-201ENST00000616808 99 ntBASIC-1.05□□□□□ -2.58
SLC28A1O00337 RNU6-924P-201ENST00000362926 108 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 RNU6-640P-201ENST00000363693 105 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 SNORD115-22-201ENST00000364456 82 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.06□□□□□ -2.58
SLC28A1O00337 SNORD63.1-201ENST00000516178 80 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 MIR548BB-201ENST00000626714 66 ntBASIC-1.06□□□□□ -2.58
SLC28A1O00337 SNORA63.4-201ENST00000362763 126 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 RNU6-755P-201ENST00000364400 103 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 RNU6-645P-201ENST00000364649 106 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 SNORD116-22-201ENST00000384430 92 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 RNU6-246P-201ENST00000384702 107 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 SNORA26.4-201ENST00000391188 123 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 AL021921.1-201ENST00000442774 93 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 SNORA40.13-201ENST00000516379 120 ntBASIC-1.07□□□□□ -2.58
SLC28A1O00337 RNU6-478P-201ENST00000363904 110 ntBASIC-1.08□□□□□ -2.58
SLC28A1O00337 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.08□□□□□ -2.58
SLC28A1O00337 SNORD114-15-201ENST00000364687 72 ntBASIC-1.08□□□□□ -2.58
SLC28A1O00337 MIR548AX-201ENST00000580117 73 ntBASIC-1.08□□□□□ -2.58
SLC28A1O00337 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.1□□□□□ -2.59
SLC28A1O00337 RNU6-557P-201ENST00000516842 110 ntBASIC-1.1□□□□□ -2.59
SLC28A1O00337 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.11□□□□□ -2.59
SLC28A1O00337 snoU83B.1-201ENST00000517136 88 ntBASIC-1.11□□□□□ -2.59
SLC28A1O00337 SNORD115-33-201ENST00000363723 82 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 RNU6-147P-201ENST00000383983 107 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 SNORA8.1-201ENST00000384250 140 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 AC074348.1-201ENST00000426503 132 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 RNU7-88P-201ENST00000458752 63 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 RNU6-303P-201ENST00000517091 106 ntBASIC-1.12□□□□□ -2.59
SLC28A1O00337 RNU6-30P-201ENST00000384561 107 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU6-604P-201ENST00000390917 100 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU7-134P-201ENST00000458997 64 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU6-732P-201ENST00000516033 103 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU6-982P-201ENST00000516216 102 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU6-807P-201ENST00000516805 107 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 U7.5-201ENST00000517224 61 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 AP002795.1-201ENST00000534879 84 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 MIR3675-201ENST00000583661 73 ntBASIC-1.13□□□□□ -2.59
SLC28A1O00337 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.14□□□□□ -2.59
SLC28A1O00337 RNU6-686P-201ENST00000364839 107 ntBASIC-1.14□□□□□ -2.59
SLC28A1O00337 RNU6-675P-201ENST00000384236 104 ntBASIC-1.14□□□□□ -2.59
SLC28A1O00337 MIR6086-201ENST00000638065 55 ntBASIC-1.14□□□□□ -2.59
SLC28A1O00337 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.15□□□□□ -2.59
SLC28A1O00337 RNU6-32P-201ENST00000383948 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms