Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL021921.1-201ENST00000442774 93 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 RNU6-752P-201ENST00000516376 102 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 MTND5P41-201ENST00000517498 206 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 MIR6739-201ENST00000622461 75 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.74□□□□□ -2.69
UPK1AO00322 RNU7-107P-201ENST00000459121 61 ntBASIC-1.74□□□□□ -2.69
UPK1AO00322 SCARNA23-201ENST00000516060 130 ntBASIC-1.74□□□□□ -2.69
UPK1AO00322 RNU6-182P-201ENST00000516970 105 ntBASIC-1.74□□□□□ -2.69
UPK1AO00322 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.74□□□□□ -2.69
UPK1AO00322 SNORD116-10-201ENST00000363791 102 ntBASIC-1.75□□□□□ -2.69
UPK1AO00322 SNORD115-22-201ENST00000364456 82 ntBASIC-1.75□□□□□ -2.69
UPK1AO00322 MIR1236-201ENST00000408340 102 ntBASIC-1.75□□□□□ -2.69
UPK1AO00322 AL450471.1-201ENST00000447509 127 ntBASIC-1.75□□□□□ -2.69
UPK1AO00322 MIR4490-201ENST00000582647 84 ntBASIC-1.75□□□□□ -2.69
UPK1AO00322 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.76□□□□□ -2.69
UPK1AO00322 SNORA19.1-201ENST00000410656 129 ntBASIC-1.76□□□□□ -2.69
UPK1AO00322 SNORD33.1-201ENST00000516213 88 ntBASIC-1.76□□□□□ -2.69
UPK1AO00322 U6.95-201ENST00000636931 70 ntBASIC-1.76□□□□□ -2.69
UPK1AO00322 MIR3914-2-201ENST00000637339 95 ntBASIC-1.76□□□□□ -2.69
UPK1AO00322 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.77□□□□□ -2.69
UPK1AO00322 RNU6-164P-201ENST00000364604 103 ntBASIC-1.77□□□□□ -2.69
UPK1AO00322 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.77□□□□□ -2.69
UPK1AO00322 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.77□□□□□ -2.69
UPK1AO00322 RNU6-681P-201ENST00000364012 104 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 RNU6-694P-201ENST00000364071 147 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 RNU6-80P-201ENST00000384195 107 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 AL078595.1-201ENST00000404458 226 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 RNU6-732P-201ENST00000516033 103 ntBASIC-1.78□□□□□ -2.69
UPK1AO00322 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 RNU6-257P-201ENST00000410238 98 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.79□□□□□ -2.7
UPK1AO00322 RNA5SP331-201ENST00000364986 107 ntBASIC-1.8□□□□□ -2.7
UPK1AO00322 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.8□□□□□ -2.7
UPK1AO00322 MIR1468-201ENST00000410600 86 ntBASIC-1.8□□□□□ -2.7
UPK1AO00322 U4.2-201ENST00000618561 85 ntBASIC-1.8□□□□□ -2.7
UPK1AO00322 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 RNU7-88P-201ENST00000458752 63 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 AC108019.1-201ENST00000512540 175 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 RNU6-537P-201ENST00000517277 103 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.81□□□□□ -2.7
UPK1AO00322 SNORD114-3-201ENST00000364969 75 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 RNU6-904P-201ENST00000516206 101 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 RNU6-971P-201ENST00000516920 106 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 MIR5683-201ENST00000636514 76 ntBASIC-1.82□□□□□ -2.7
UPK1AO00322 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.83□□□□□ -2.7
UPK1AO00322 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.83□□□□□ -2.7
UPK1AO00322 RNU6-880P-201ENST00000384526 107 ntBASIC-1.83□□□□□ -2.7
UPK1AO00322 MT-TG-201ENST00000387429 68 ntBASIC-1.83□□□□□ -2.7
UPK1AO00322 U7.5-201ENST00000517224 61 ntBASIC-1.83□□□□□ -2.7
UPK1AO00322 RNU6-886P-201ENST00000384319 105 ntBASIC-1.84□□□□□ -2.7
UPK1AO00322 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
UPK1AO00322 RNY4P27-201ENST00000363341 96 ntBASIC-1.85□□□□□ -2.71
UPK1AO00322 RNU6-340P-201ENST00000364005 107 ntBASIC-1.85□□□□□ -2.71
UPK1AO00322 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.85□□□□□ -2.71
UPK1AO00322 RNU7-61P-201ENST00000515897 61 ntBASIC-1.86□□□□□ -2.71
UPK1AO00322 RNU7-200P-201ENST00000516105 62 ntBASIC-1.86□□□□□ -2.71
UPK1AO00322 MIR548Q-201ENST00000408404 100 ntBASIC-1.87□□□□□ -2.71
UPK1AO00322 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.87□□□□□ -2.71
UPK1AO00322 RNU6-807P-201ENST00000516805 107 ntBASIC-1.87□□□□□ -2.71
UPK1AO00322 MIR548C-201ENST00000384815 97 ntBASIC-1.88□□□□□ -2.71
UPK1AO00322 AL035461.1-201ENST00000421490 332 ntBASIC-1.88□□□□□ -2.71
UPK1AO00322 RNU7-153P-201ENST00000516455 62 ntBASIC-1.88□□□□□ -2.71
UPK1AO00322 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 SNORD115-27-201ENST00000364430 82 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 SNORD116-21-201ENST00000384507 92 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 SNORD77.2-201ENST00000391045 68 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 RNU6-656P-201ENST00000516785 107 ntBASIC-1.89□□□□□ -2.71
UPK1AO00322 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 RNU6-246P-201ENST00000384702 107 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 MIR1302-5-201ENST00000408164 150 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 RNU6-168P-201ENST00000516189 101 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 RNU6-659P-201ENST00000516454 104 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 RNU6-118P-201ENST00000516552 102 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 U2.7-201ENST00000619197 100 ntBASIC-1.9□□□□□ -2.71
UPK1AO00322 SNORD19-201ENST00000391191 68 ntBASIC-1.91□□□□□ -2.72
UPK1AO00322 RPL35AP4-201ENST00000412007 102 ntBASIC-1.91□□□□□ -2.72
UPK1AO00322 MIR664B-201ENST00000626756 61 ntBASIC-1.91□□□□□ -2.72
UPK1AO00322 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.92□□□□□ -2.72
UPK1AO00322 RNU6-162P-201ENST00000516228 103 ntBASIC-1.92□□□□□ -2.72
UPK1AO00322 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.92□□□□□ -2.72
UPK1AO00322 AP002795.1-201ENST00000534879 84 ntBASIC-1.92□□□□□ -2.72
UPK1AO00322 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 MIR590-201ENST00000385008 97 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 MIR519C-201ENST00000385053 87 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 AC090616.4-201ENST00000448026 115 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.93□□□□□ -2.72
UPK1AO00322 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 321.1 ms