Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 MIR4668-201ENST00000582284 70 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 MIR6738-201ENST00000619620 64 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 MIR124-2-201ENST00000385081 109 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 YWHAEP3-201ENST00000582767 121 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 AP001318.4-201ENST00000616637 121 ntBASIC-0.67□□□□□ -2.52
NKX2-6A6NCS4 MIR517B-201ENST00000385102 67 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 MIR196A1-201ENST00000388006 70 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 MIR1255B2-201ENST00000408618 67 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 RNU6-267P-201ENST00000516714 103 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 RNU6-158P-201ENST00000517104 100 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 AL353803.5-201ENST00000599815 141 ntBASIC-0.68□□□□□ -2.52
NKX2-6A6NCS4 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 RNU6-340P-201ENST00000364005 107 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 AC022137.1-201ENST00000483735 151 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 CYP3A54P-201ENST00000566950 75 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 MALAT1.1-201ENST00000618249 95 ntBASIC-0.69□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 SNORD113-1-201ENST00000365321 69 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 RNU6-402P-201ENST00000410678 103 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 SNORA40.13-201ENST00000516379 120 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 MIR2052-201ENST00000636055 55 ntBASIC-0.7□□□□□ -2.52
NKX2-6A6NCS4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.71□□□□□ -2.52
NKX2-6A6NCS4 SNORD20-201ENST00000384550 80 ntBASIC-0.71□□□□□ -2.52
NKX2-6A6NCS4 SNORD77.2-201ENST00000391045 68 ntBASIC-0.71□□□□□ -2.52
NKX2-6A6NCS4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.71□□□□□ -2.52
NKX2-6A6NCS4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.71□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 MIR488-201ENST00000365739 83 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 AL603908.1-201ENST00000406098 201 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 MIR378F-201ENST00000578143 78 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 MIR4464-201ENST00000580818 92 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 MIR4324-201ENST00000584846 72 ntBASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
NKX2-6A6NCS4 SNORD115-37-201ENST00000363768 82 ntBASIC-0.73□□□□□ -2.53
NKX2-6A6NCS4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.73□□□□□ -2.53
NKX2-6A6NCS4 MIR6888-201ENST00000621977 67 ntBASIC-0.73□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 RNU6-219P-201ENST00000364728 107 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 RNU6-147P-201ENST00000383983 107 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 SNORD116-22-201ENST00000384430 92 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 AL035461.1-201ENST00000421490 332 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 AC093729.1-201ENST00000513074 128 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 U4.2-201ENST00000618561 85 ntBASIC-0.74□□□□□ -2.53
NKX2-6A6NCS4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 RNU6-755P-201ENST00000364400 103 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 MIR521-2-201ENST00000384818 87 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 MIR1207-201ENST00000408249 87 ntBASIC-0.75□□□□□ -2.53
NKX2-6A6NCS4 RNU6-640P-201ENST00000363693 105 ntBASIC-0.76□□□□□ -2.53
NKX2-6A6NCS4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
NKX2-6A6NCS4 MIR548BB-201ENST00000626714 66 ntBASIC-0.76□□□□□ -2.53
NKX2-6A6NCS4 RNU6-330P-201ENST00000363015 107 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 RNU6-624P-201ENST00000363411 107 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 RNU6-681P-201ENST00000364012 104 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 RNU6-215P-201ENST00000365169 102 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 RNU6-752P-201ENST00000516376 102 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 AC140658.3-201ENST00000567603 271 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 AL445584.3-201ENST00000617173 78 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 MIR6739-201ENST00000622461 75 ntBASIC-0.77□□□□□ -2.53
NKX2-6A6NCS4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 SNORD114-3-201ENST00000364969 75 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-32P-201ENST00000383948 107 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-13P-201ENST00000384248 107 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-12P-201ENST00000384604 107 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-41P-201ENST00000384741 107 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 MIR519A2-201ENST00000384990 87 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.78□□□□□ -2.53
NKX2-6A6NCS4 RNU6-44P-201ENST00000384045 107 ntBASIC-0.79□□□□□ -2.54
NKX2-6A6NCS4 RNU6-518P-201ENST00000516056 96 ntBASIC-0.79□□□□□ -2.54
NKX2-6A6NCS4 RNU6-919P-201ENST00000516731 104 ntBASIC-0.79□□□□□ -2.54
NKX2-6A6NCS4 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.8□□□□□ -2.54
NKX2-6A6NCS4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.8□□□□□ -2.54
NKX2-6A6NCS4 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.8□□□□□ -2.54
NKX2-6A6NCS4 RNU6-656P-201ENST00000516785 107 ntBASIC-0.8□□□□□ -2.54
NKX2-6A6NCS4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.8□□□□□ -2.54
NKX2-6A6NCS4 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.81□□□□□ -2.54
NKX2-6A6NCS4 RNU6-497P-201ENST00000365316 104 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 1444.8 ms