Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MIR5009-201ENST00000578736 100 ntBASIC-2.96□□□□□ -2.88
TRAV4A0A0B4J268 RNU6-795P-201ENST00000516323 103 ntBASIC-2.97□□□□□ -2.88
TRAV4A0A0B4J268 SNORA81.3-201ENST00000517283 198 ntBASIC-2.97□□□□□ -2.88
TRAV4A0A0B4J268 MIR548AM-201ENST00000584298 74 ntBASIC-2.97□□□□□ -2.88
TRAV4A0A0B4J268 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.97□□□□□ -2.88
TRAV4A0A0B4J268 RNU6-645P-201ENST00000364649 106 ntBASIC-2.98□□□□□ -2.89
TRAV4A0A0B4J268 MIR520D-201ENST00000385002 87 ntBASIC-2.98□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 RNU6-980P-201ENST00000516925 103 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 AC012531.4-201ENST00000616509 177 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 AC141273.2-201ENST00000618989 130 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.99□□□□□ -2.89
TRAV4A0A0B4J268 RNU6-1227P-201ENST00000383981 107 ntBASIC-3□□□□□ -2.89
TRAV4A0A0B4J268 MIR4756-201ENST00000577874 78 ntBASIC-3□□□□□ -2.89
TRAV4A0A0B4J268 RNU6-887P-201ENST00000410660 100 ntBASIC-3.01□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.02□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.02□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.02□□□□□ -2.89
TRAV4A0A0B4J268 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.02□□□□□ -2.89
TRAV4A0A0B4J268 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.02□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.03□□□□□ -2.89
TRAV4A0A0B4J268 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.03□□□□□ -2.89
TRAV4A0A0B4J268 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.03□□□□□ -2.89
TRAV4A0A0B4J268 RNU7-174P-201ENST00000516248 59 ntBASIC-3.03□□□□□ -2.89
TRAV4A0A0B4J268 RNU4-40P-201ENST00000364351 143 ntBASIC-3.04□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.04□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-111P-201ENST00000517179 105 ntBASIC-3.04□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-598P-201ENST00000364017 105 ntBASIC-3.05□□□□□ -2.9
TRAV4A0A0B4J268 RNY4P7-201ENST00000364600 96 ntBASIC-3.05□□□□□ -2.9
TRAV4A0A0B4J268 MIR548X2-201ENST00000579776 100 ntBASIC-3.05□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 SNORD116-10-201ENST00000363791 102 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-563P-201ENST00000364872 108 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-258P-201ENST00000390884 101 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 MIR3128-201ENST00000581957 66 ntBASIC-3.06□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 SNORD77.2-201ENST00000391045 68 ntBASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-587P-201ENST00000391282 106 ntBASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.07□□□□□ -2.9
TRAV4A0A0B4J268 SNORA20.1-201ENST00000364790 130 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-861P-201ENST00000516745 106 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-537P-201ENST00000517277 103 ntBASIC-3.08□□□□□ -2.9
TRAV4A0A0B4J268 MIR548F4-201ENST00000408515 105 ntBASIC-3.09□□□□□ -2.9
TRAV4A0A0B4J268 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.09□□□□□ -2.9
TRAV4A0A0B4J268 MIR3139-201ENST00000579145 76 ntBASIC-3.09□□□□□ -2.9
TRAV4A0A0B4J268 MIR3170-201ENST00000582699 77 ntBASIC-3.09□□□□□ -2.9
TRAV4A0A0B4J268 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.09□□□□□ -2.9
TRAV4A0A0B4J268 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.1□□□□□ -2.91
TRAV4A0A0B4J268 MIR548S-201ENST00000581352 82 ntBASIC-3.1□□□□□ -2.91
TRAV4A0A0B4J268 AL157777.2-201ENST00000258070 137 ntBASIC-3.11□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.11□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.11□□□□□ -2.91
TRAV4A0A0B4J268 RNU7-153P-201ENST00000516455 62 ntBASIC-3.11□□□□□ -2.91
TRAV4A0A0B4J268 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.11□□□□□ -2.91
TRAV4A0A0B4J268 MIR548AA1-201ENST00000384971 97 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 RNU4-88P-201ENST00000411220 86 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 SCARNA23-201ENST00000516060 130 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 U2.18-201ENST00000622185 84 ntBASIC-3.12□□□□□ -2.91
TRAV4A0A0B4J268 RNU6-247P-201ENST00000362636 107 ntBASIC-3.13□□□□□ -2.91
TRAV4A0A0B4J268 RNU6-698P-201ENST00000363523 107 ntBASIC-3.14□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.14□□□□□ -2.91
TRAV4A0A0B4J268 RNU6-34P-201ENST00000364874 107 ntBASIC-3.14□□□□□ -2.91
TRAV4A0A0B4J268 RNU6-772P-201ENST00000516042 105 ntBASIC-3.14□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.15□□□□□ -2.91
TRAV4A0A0B4J268 RNA5SP405-201ENST00000363059 114 ntBASIC-3.15□□□□□ -2.91
TRAV4A0A0B4J268 SNORD116-18-201ENST00000383961 92 ntBASIC-3.15□□□□□ -2.91
TRAV4A0A0B4J268 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.16□□□□□ -2.92
TRAV4A0A0B4J268 AL117187.1-201ENST00000555482 181 ntBASIC-3.17□□□□□ -2.92
TRAV4A0A0B4J268 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.17□□□□□ -2.92
TRAV4A0A0B4J268 RNA5SP93-201ENST00000362525 114 ntBASIC-3.18□□□□□ -2.92
TRAV4A0A0B4J268 RNU6-194P-201ENST00000363862 105 ntBASIC-3.18□□□□□ -2.92
TRAV4A0A0B4J268 MT-TM-201ENST00000387377 68 ntBASIC-3.18□□□□□ -2.92
TRAV4A0A0B4J268 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.18□□□□□ -2.92
TRAV4A0A0B4J268 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.18□□□□□ -2.92
TRAV4A0A0B4J268 RNU6-766P-201ENST00000362478 107 ntBASIC-3.19□□□□□ -2.92
TRAV4A0A0B4J268 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.19□□□□□ -2.92
TRAV4A0A0B4J268 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.19□□□□□ -2.92
TRAV4A0A0B4J268 RNU6-682P-201ENST00000363843 106 ntBASIC-3.2□□□□□ -2.92
TRAV4A0A0B4J268 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.21□□□□□ -2.92
TRAV4A0A0B4J268 MIR569-201ENST00000385228 96 ntBASIC-3.21□□□□□ -2.92
TRAV4A0A0B4J268 MIR3675-201ENST00000583661 73 ntBASIC-3.21□□□□□ -2.92
TRAV4A0A0B4J268 AC062037.2-201ENST00000610137 73 ntBASIC-3.21□□□□□ -2.92
TRAV4A0A0B4J268 U4.4-201ENST00000620626 117 ntBASIC-3.21□□□□□ -2.92
TRAV4A0A0B4J268 MTCYBP6-201ENST00000441810 138 ntBASIC-3.22□□□□□ -2.92
TRAV4A0A0B4J268 RNU7-120P-201ENST00000459334 63 ntBASIC-3.22□□□□□ -2.92
TRAV4A0A0B4J268 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.22□□□□□ -2.92
TRAV4A0A0B4J268 MIR548V-201ENST00000584165 80 ntBASIC-3.22□□□□□ -2.92
TRAV4A0A0B4J268 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.22□□□□□ -2.92
TRAV4A0A0B4J268 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.23□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms