Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNA5SP255-201ENST00000516370 107 ntBASIC1.81□□□□□ -2.12
PHF8Q9UPP1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
PHF8Q9UPP1 Y_RNA.74-201ENST00000362911 99 ntBASIC1.8□□□□□ -2.12
PHF8Q9UPP1 RNA5SP480-201ENST00000516840 109 ntBASIC1.8□□□□□ -2.12
PHF8Q9UPP1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
PHF8Q9UPP1 SNORA9.1-201ENST00000362412 131 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 RNU6-753P-201ENST00000363926 107 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 MIR520E-201ENST00000384867 87 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 MIR516B1-201ENST00000385211 90 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 AC011195.1-201ENST00000578177 177 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 MIR7107-201ENST00000611489 80 ntBASIC1.79□□□□□ -2.12
PHF8Q9UPP1 SNORD114-27-201ENST00000363766 70 ntBASIC1.78□□□□□ -2.12
PHF8Q9UPP1 MIR618-201ENST00000385287 98 ntBASIC1.78□□□□□ -2.12
PHF8Q9UPP1 RNA5SP94-201ENST00000516917 108 ntBASIC1.78□□□□□ -2.12
PHF8Q9UPP1 MIR6767-201ENST00000637302 66 ntBASIC1.78□□□□□ -2.12
PHF8Q9UPP1 SNORD116-16-201ENST00000384533 92 ntBASIC1.77□□□□□ -2.13
PHF8Q9UPP1 AC244090.1-201ENST00000441884 93 ntBASIC1.77□□□□□ -2.13
PHF8Q9UPP1 AC243829.6-201ENST00000612652 106 ntBASIC1.77□□□□□ -2.13
PHF8Q9UPP1 RNU1-124P-201ENST00000363861 145 ntBASIC1.76□□□□□ -2.13
PHF8Q9UPP1 SNORD26-201ENST00000384147 75 ntBASIC1.76□□□□□ -2.13
PHF8Q9UPP1 SNORD99-201ENST00000408612 74 ntBASIC1.76□□□□□ -2.13
PHF8Q9UPP1 SNORD2-201ENST00000459163 69 ntBASIC1.76□□□□□ -2.13
PHF8Q9UPP1 RNU6-518P-201ENST00000516056 96 ntBASIC1.76□□□□□ -2.13
PHF8Q9UPP1 MIR20A-201ENST00000362279 71 ntBASIC1.75□□□□□ -2.13
PHF8Q9UPP1 RPS29P1-201ENST00000465274 159 ntBASIC1.75□□□□□ -2.13
PHF8Q9UPP1 MIR5706-201ENST00000579841 80 ntBASIC1.75□□□□□ -2.13
PHF8Q9UPP1 RNU6-1246P-201ENST00000391064 107 ntBASIC1.74□□□□□ -2.13
PHF8Q9UPP1 RNU6-980P-201ENST00000516925 103 ntBASIC1.74□□□□□ -2.13
PHF8Q9UPP1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.74□□□□□ -2.13
PHF8Q9UPP1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.73□□□□□ -2.13
PHF8Q9UPP1 AC243829.3-201ENST00000622177 108 ntBASIC1.73□□□□□ -2.13
PHF8Q9UPP1 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
PHF8Q9UPP1 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
PHF8Q9UPP1 SNORA70.25-201ENST00000612741 95 ntBASIC1.72□□□□□ -2.13
PHF8Q9UPP1 MIR6515-201ENST00000619843 57 ntBASIC1.72□□□□□ -2.13
PHF8Q9UPP1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.72□□□□□ -2.13
PHF8Q9UPP1 RNA5SP404-201ENST00000517118 132 ntBASIC1.71□□□□□ -2.14
PHF8Q9UPP1 MIR7110-201ENST00000612638 86 ntBASIC1.71□□□□□ -2.14
PHF8Q9UPP1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
PHF8Q9UPP1 MIR527-201ENST00000385244 85 ntBASIC1.7□□□□□ -2.14
PHF8Q9UPP1 SNORD116.2-201ENST00000391251 93 ntBASIC1.7□□□□□ -2.14
PHF8Q9UPP1 Y_RNA.282-201ENST00000364793 102 ntBASIC1.68□□□□□ -2.14
PHF8Q9UPP1 MIR1255B2-201ENST00000408618 67 ntBASIC1.68□□□□□ -2.14
PHF8Q9UPP1 HMGN2P22-201ENST00000427588 175 ntBASIC1.68□□□□□ -2.14
PHF8Q9UPP1 MIR6788-201ENST00000618842 66 ntBASIC1.68□□□□□ -2.14
PHF8Q9UPP1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
PHF8Q9UPP1 MIR519A2-201ENST00000384990 87 ntBASIC1.67□□□□□ -2.14
PHF8Q9UPP1 MIR150-201ENST00000385048 84 ntBASIC1.67□□□□□ -2.14
PHF8Q9UPP1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.67□□□□□ -2.14
PHF8Q9UPP1 MIR151B-201ENST00000584249 96 ntBASIC1.67□□□□□ -2.14
PHF8Q9UPP1 AC090617.8-201ENST00000623339 167 ntBASIC1.67□□□□□ -2.14
PHF8Q9UPP1 SNORD114-26-201ENST00000363543 72 ntBASIC1.66□□□□□ -2.14
PHF8Q9UPP1 RNU4-33P-201ENST00000364316 85 ntBASIC1.66□□□□□ -2.14
PHF8Q9UPP1 MIR548J-201ENST00000408833 112 ntBASIC1.66□□□□□ -2.14
PHF8Q9UPP1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.66□□□□□ -2.14
PHF8Q9UPP1 AC068338.1-201ENST00000565567 176 ntBASIC1.66□□□□□ -2.14
PHF8Q9UPP1 SNORA40.16-201ENST00000517238 121 ntBASIC1.65□□□□□ -2.15
PHF8Q9UPP1 RNU6-246P-201ENST00000384702 107 ntBASIC1.64□□□□□ -2.15
PHF8Q9UPP1 RNU7-154P-201ENST00000516194 62 ntBASIC1.64□□□□□ -2.15
PHF8Q9UPP1 MIR4752-201ENST00000579672 72 ntBASIC1.64□□□□□ -2.15
PHF8Q9UPP1 U7.6-201ENST00000610841 64 ntBASIC1.64□□□□□ -2.15
PHF8Q9UPP1 SNORD114-29-201ENST00000364819 70 ntBASIC1.63□□□□□ -2.15
PHF8Q9UPP1 RNA5SP222-201ENST00000411039 105 ntBASIC1.63□□□□□ -2.15
PHF8Q9UPP1 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.63□□□□□ -2.15
PHF8Q9UPP1 MIR429-201ENST00000362106 83 ntBASIC1.62□□□□□ -2.15
PHF8Q9UPP1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.62□□□□□ -2.15
PHF8Q9UPP1 RNA5SP470-201ENST00000516463 106 ntBASIC1.62□□□□□ -2.15
PHF8Q9UPP1 MIR6779-201ENST00000617283 64 ntBASIC1.62□□□□□ -2.15
PHF8Q9UPP1 SNORA40B-201ENST00000385573 128 ntBASIC1.61□□□□□ -2.15
PHF8Q9UPP1 MIR548X-201ENST00000580069 75 ntBASIC1.61□□□□□ -2.15
PHF8Q9UPP1 MIR4295-201ENST00000585286 85 ntBASIC1.6□□□□□ -2.15
PHF8Q9UPP1 RNU1-29P-201ENST00000606574 126 ntBASIC1.6□□□□□ -2.15
PHF8Q9UPP1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PHF8Q9UPP1 MIR598-201ENST00000384868 97 ntBASIC1.59□□□□□ -2.15
PHF8Q9UPP1 AC087343.1-201ENST00000477341 475 ntBASIC1.59□□□□□ -2.15
PHF8Q9UPP1 AL353765.1-201ENST00000605514 183 ntBASIC1.59□□□□□ -2.15
PHF8Q9UPP1 RNU6-35P-201ENST00000384530 107 ntBASIC1.58□□□□□ -2.16
PHF8Q9UPP1 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
PHF8Q9UPP1 MIR26B-201ENST00000362251 77 ntBASIC1.57□□□□□ -2.16
PHF8Q9UPP1 RNU6-930P-201ENST00000390938 100 ntBASIC1.57□□□□□ -2.16
PHF8Q9UPP1 MIR6773-201ENST00000612812 74 ntBASIC1.57□□□□□ -2.16
PHF8Q9UPP1 SNORD115-25-201ENST00000362619 82 ntBASIC1.56□□□□□ -2.16
PHF8Q9UPP1 RNU6-337P-201ENST00000391243 106 ntBASIC1.56□□□□□ -2.16
PHF8Q9UPP1 RNU6-939P-201ENST00000384634 107 ntBASIC1.55□□□□□ -2.16
PHF8Q9UPP1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PHF8Q9UPP1 RNA5SP436-201ENST00000516020 115 ntBASIC1.55□□□□□ -2.16
PHF8Q9UPP1 RNA5SP325-201ENST00000363756 130 ntBASIC1.54□□□□□ -2.16
PHF8Q9UPP1 RNA5SP517-201ENST00000364724 117 ntBASIC1.54□□□□□ -2.16
PHF8Q9UPP1 AC069271.1-201ENST00000445577 156 ntBASIC1.54□□□□□ -2.16
PHF8Q9UPP1 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
PHF8Q9UPP1 MIR373-201ENST00000362273 69 ntBASIC1.53□□□□□ -2.16
PHF8Q9UPP1 RNU6-810P-201ENST00000364001 107 ntBASIC1.53□□□□□ -2.16
PHF8Q9UPP1 SNORA2A-201ENST00000383885 135 ntBASIC1.53□□□□□ -2.16
PHF8Q9UPP1 RNU6-172P-201ENST00000411000 93 ntBASIC1.53□□□□□ -2.16
PHF8Q9UPP1 SNORD1B-201ENST00000363091 84 ntBASIC1.52□□□□□ -2.17
PHF8Q9UPP1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
PHF8Q9UPP1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PHF8Q9UPP1 RNY1P8-201ENST00000383970 114 ntBASIC1.5□□□□□ -2.17
PHF8Q9UPP1 MIR140-201ENST00000385282 100 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms