Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 RNU6-824P-201ENST00000363724 104 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 RNU6-209P-201ENST00000384118 107 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 MIR517B-201ENST00000385102 67 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 snoU13.17-201ENST00000458802 104 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 MIR3133-201ENST00000583157 78 ntBASIC-0.98□□□□□ -2.57
VMP1Q96GC9 RNU6-704P-201ENST00000364162 103 ntBASIC-0.99□□□□□ -2.57
VMP1Q96GC9 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.99□□□□□ -2.57
VMP1Q96GC9 RNU6-30P-201ENST00000384561 107 ntBASIC-0.99□□□□□ -2.57
VMP1Q96GC9 MIR1302-5-201ENST00000408164 150 ntBASIC-0.99□□□□□ -2.57
VMP1Q96GC9 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
VMP1Q96GC9 MIR196A1-201ENST00000388006 70 ntBASIC-1□□□□□ -2.57
VMP1Q96GC9 SCARNA20.2-201ENST00000516052 116 ntBASIC-1□□□□□ -2.57
VMP1Q96GC9 RNU6-537P-201ENST00000517277 103 ntBASIC-1□□□□□ -2.57
VMP1Q96GC9 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.01□□□□□ -2.57
VMP1Q96GC9 MIR590-201ENST00000385008 97 ntBASIC-1.01□□□□□ -2.57
VMP1Q96GC9 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.01□□□□□ -2.57
VMP1Q96GC9 MIR6509-201ENST00000614603 85 ntBASIC-1.01□□□□□ -2.57
VMP1Q96GC9 AC090617.8-201ENST00000623339 167 ntBASIC-1.01□□□□□ -2.57
VMP1Q96GC9 RNU6-208P-201ENST00000362431 107 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 SNORA2.1-201ENST00000363089 137 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 SNORD18.2-201ENST00000459604 70 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 RNU7-61P-201ENST00000515897 61 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 RNA5SP147-201ENST00000516493 109 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 MIR548AX-201ENST00000580117 73 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 MIR4796-201ENST00000580742 81 ntBASIC-1.02□□□□□ -2.57
VMP1Q96GC9 MIR203A-201ENST00000384836 110 ntBASIC-1.03□□□□□ -2.57
VMP1Q96GC9 MIR1236-201ENST00000408340 102 ntBASIC-1.03□□□□□ -2.57
VMP1Q96GC9 RNU6-274P-201ENST00000459566 107 ntBASIC-1.03□□□□□ -2.57
VMP1Q96GC9 MIR3657-201ENST00000584818 117 ntBASIC-1.03□□□□□ -2.57
VMP1Q96GC9 U6.81-201ENST00000612550 106 ntBASIC-1.03□□□□□ -2.57
VMP1Q96GC9 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.04□□□□□ -2.58
VMP1Q96GC9 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.04□□□□□ -2.58
VMP1Q96GC9 AL691482.2-201ENST00000457453 84 ntBASIC-1.04□□□□□ -2.58
VMP1Q96GC9 snoU13.19-201ENST00000459148 104 ntBASIC-1.04□□□□□ -2.58
VMP1Q96GC9 AL353803.5-201ENST00000599815 141 ntBASIC-1.04□□□□□ -2.58
VMP1Q96GC9 RNU6-774P-201ENST00000363238 107 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 SNORA33.1-201ENST00000364957 130 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 RNU6-746P-201ENST00000384112 109 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 RNU6-959P-201ENST00000384671 107 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 MIR124-2-201ENST00000385081 109 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 HAR1A.1-201ENST00000459583 118 ntBASIC-1.05□□□□□ -2.58
VMP1Q96GC9 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.06□□□□□ -2.58
VMP1Q96GC9 SNORD114-25-201ENST00000363742 72 ntBASIC-1.06□□□□□ -2.58
VMP1Q96GC9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
VMP1Q96GC9 AC008267.6-201ENST00000441664 139 ntBASIC-1.06□□□□□ -2.58
VMP1Q96GC9 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 RNU6-106P-201ENST00000384405 107 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 RNU6-554P-201ENST00000410466 106 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 RNA5SP470-201ENST00000516463 106 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.07□□□□□ -2.58
VMP1Q96GC9 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 RNU6-162P-201ENST00000516228 103 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 RNU6-109P-201ENST00000516364 107 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 RNU6-184P-201ENST00000516514 107 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 MIR3671-201ENST00000580455 88 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 MIR4464-201ENST00000580818 92 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 U7.3-201ENST00000616123 62 ntBASIC-1.08□□□□□ -2.58
VMP1Q96GC9 SNORD83B-201ENST00000386745 93 ntBASIC-1.09□□□□□ -2.58
VMP1Q96GC9 MIR1255B2-201ENST00000408618 67 ntBASIC-1.09□□□□□ -2.58
VMP1Q96GC9 MIR3668-201ENST00000582138 75 ntBASIC-1.09□□□□□ -2.58
VMP1Q96GC9 MIR4324-201ENST00000584846 72 ntBASIC-1.09□□□□□ -2.58
VMP1Q96GC9 MIR6738-201ENST00000619620 64 ntBASIC-1.09□□□□□ -2.58
VMP1Q96GC9 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.1□□□□□ -2.59
VMP1Q96GC9 CYP3A54P-201ENST00000566950 75 ntBASIC-1.1□□□□□ -2.59
VMP1Q96GC9 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 AL450471.1-201ENST00000447509 127 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 RNU7-153P-201ENST00000516455 62 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 AL445584.3-201ENST00000617173 78 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 MIR6888-201ENST00000621977 67 ntBASIC-1.11□□□□□ -2.59
VMP1Q96GC9 SNORA19-201ENST00000384737 128 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 MIR521-2-201ENST00000384818 87 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 MIR147A-201ENST00000385079 72 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.12□□□□□ -2.59
VMP1Q96GC9 RNU6-752P-201ENST00000516376 102 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 AL365222.1-201ENST00000614661 98 ntBASIC-1.12□□□□□ -2.59
VMP1Q96GC9 SNORD114-17-201ENST00000364699 75 ntBASIC-1.13□□□□□ -2.59
VMP1Q96GC9 RNU6-81P-201ENST00000365608 104 ntBASIC-1.13□□□□□ -2.59
VMP1Q96GC9 RNU6-431P-201ENST00000383874 107 ntBASIC-1.13□□□□□ -2.59
VMP1Q96GC9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.13□□□□□ -2.59
VMP1Q96GC9 MIR6129-201ENST00000616087 109 ntBASIC-1.13□□□□□ -2.59
VMP1Q96GC9 SNORD64-201ENST00000386683 67 ntBASIC-1.14□□□□□ -2.59
VMP1Q96GC9 RNU6-766P-201ENST00000362478 107 ntBASIC-1.15□□□□□ -2.59
VMP1Q96GC9 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
VMP1Q96GC9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
VMP1Q96GC9 MIR587-201ENST00000384845 96 ntBASIC-1.15□□□□□ -2.59
VMP1Q96GC9 MIR6739-201ENST00000622461 75 ntBASIC-1.15□□□□□ -2.59
VMP1Q96GC9 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms